RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.17
CDK18-222ENST00000515494 ARAP1Q96P48 1450 aa16.08■□□□□ 0.16
CDK18-222ENST00000515494 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
CDK18-222ENST00000515494 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
CDK18-222ENST00000515494 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CDK18-222ENST00000515494 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
CDK18-222ENST00000515494 GRIN2BQ13224 1484 aa16■□□□□ 0.15
CDK18-222ENST00000515494 CUL7Q14999 1698 aa16■□□□□ 0.15
CDK18-222ENST00000515494 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
CDK18-222ENST00000515494 CCER1Q8TC90 406 aaPredicted RBP15.99■□□□□ 0.15
CDK18-222ENST00000515494 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
CDK18-222ENST00000515494 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
CDK18-222ENST00000515494 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
CDK18-222ENST00000515494 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
CDK18-222ENST00000515494 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
CDK18-222ENST00000515494 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.14
CDK18-222ENST00000515494 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.14
CDK18-222ENST00000515494 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
CDK18-222ENST00000515494 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
CDK18-222ENST00000515494 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
CDK18-222ENST00000515494 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
CDK18-222ENST00000515494 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
CDK18-222ENST00000515494 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
CDK18-222ENST00000515494 ITGAEP38570 1179 aa15.79■□□□□ 0.12
CDK18-222ENST00000515494 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
CDK18-222ENST00000515494 PCF11O94913 1555 aaKnown RBP15.77■□□□□ 0.12
CDK18-222ENST00000515494 EFCAB5A4FU69 1503 aa15.75■□□□□ 0.11
CDK18-222ENST00000515494 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
CDK18-222ENST00000515494 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
CDK18-222ENST00000515494 CEP170Q5SW79 1584 aa15.74■□□□□ 0.11
CDK18-222ENST00000515494 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
CDK18-222ENST00000515494 FMN1Q68DA7 1419 aa15.72■□□□□ 0.11
CDK18-222ENST00000515494 SAMD9Q5K651 1589 aa15.71■□□□□ 0.1
CDK18-222ENST00000515494 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
CDK18-222ENST00000515494 CCNB3Q8WWL7 1395 aa15.69■□□□□ 0.1
CDK18-222ENST00000515494 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
CDK18-222ENST00000515494 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
CDK18-222ENST00000515494 PHLDB1Q86UU1 1377 aa15.68■□□□□ 0.1
CDK18-222ENST00000515494 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
CDK18-222ENST00000515494 DISP1Q96F81 1524 aa15.66■□□□□ 0.1
CDK18-222ENST00000515494 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 NUP160Q12769 1436 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 MTUS2Q5JR59 1369 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 MAP3K1Q13233 1512 aa15.65■□□□□ 0.1
CDK18-222ENST00000515494 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
CDK18-222ENST00000515494 CHD1O14646 1710 aa15.63■□□□□ 0.09
CDK18-222ENST00000515494 CFAP43Q8NDM7 1665 aa15.61■□□□□ 0.09
CDK18-222ENST00000515494 KIAA0556O60303 1618 aa15.61■□□□□ 0.09
CDK18-222ENST00000515494 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
CDK18-222ENST00000515494 PRG4Q92954 1404 aaPredicted RBP15.59■□□□□ 0.09
CDK18-222ENST00000515494 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.09
CDK18-222ENST00000515494 CARMIL2Q6F5E8 1435 aa15.58■□□□□ 0.08
CDK18-222ENST00000515494 LRRIQ1Q96JM4 1722 aa15.58■□□□□ 0.08
CDK18-222ENST00000515494 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
CDK18-222ENST00000515494 DHX57Q6P158 1386 aaKnown RBP15.54■□□□□ 0.08
CDK18-222ENST00000515494 MAGI3Q5TCQ9 1506 aa15.52■□□□□ 0.08
CDK18-222ENST00000515494 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
CDK18-222ENST00000515494 PTPRGP23470 1445 aa15.5■□□□□ 0.07
CDK18-222ENST00000515494 NUP153P49790 1475 aaKnown RBP15.5■□□□□ 0.07
CDK18-222ENST00000515494 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
CDK18-222ENST00000515494 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
CDK18-222ENST00000515494 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
CDK18-222ENST00000515494 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
CDK18-222ENST00000515494 RAPGEF6Q8TEU7 1601 aa15.47■□□□□ 0.07
CDK18-222ENST00000515494 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
CDK18-222ENST00000515494 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
CDK18-222ENST00000515494 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.07
CDK18-222ENST00000515494 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
CDK18-222ENST00000515494 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
CDK18-222ENST00000515494 ZNF777Q9ULD5 760 aaPredicted RBP15.44■□□□□ 0.06
CDK18-222ENST00000515494 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
CDK18-222ENST00000515494 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
CDK18-222ENST00000515494 EHBP1L1Q8N3D4 1523 aa15.42■□□□□ 0.06
CDK18-222ENST00000515494 ZNF644Q9H582 1327 aaPredicted RBP15.41■□□□□ 0.06
CDK18-222ENST00000515494 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
CDK18-222ENST00000515494 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
CDK18-222ENST00000515494 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
CDK18-222ENST00000515494 KCNH8Q96L42 1107 aa15.4■□□□□ 0.06
CDK18-222ENST00000515494 PTPRKQ15262 1439 aa15.4■□□□□ 0.06
CDK18-222ENST00000515494 SUPT6HQ7KZ85 1726 aaKnown RBP15.4■□□□□ 0.06
CDK18-222ENST00000515494 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
CDK18-222ENST00000515494 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
CDK18-222ENST00000515494 ATP10BO94823 1461 aa15.38■□□□□ 0.05
CDK18-222ENST00000515494 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
CDK18-222ENST00000515494 RRP7BPQ9NSQ0 103 aa15.37■□□□□ 0.05
CDK18-222ENST00000515494 BCL11AQ9H165 835 aa15.36■□□□□ 0.05
CDK18-222ENST00000515494 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
CDK18-222ENST00000515494 ABCA8O94911 1581 aa15.35■□□□□ 0.05
CDK18-222ENST00000515494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDK18-222ENST00000515494 UACAQ9BZF9 1416 aa15.35■□□□□ 0.05
CDK18-222ENST00000515494 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
CDK18-222ENST00000515494 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
CDK18-222ENST00000515494 SHROOM2Q13796 1616 aa15.34■□□□□ 0.05
CDK18-222ENST00000515494 TROQ12816 1431 aaPredicted RBP15.33■□□□□ 0.05
CDK18-222ENST00000515494 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
CDK18-222ENST00000515494 MAPKBP1O60336 1514 aa15.32■□□□□ 0.04
CDK18-222ENST00000515494 PTPN23Q9H3S7 1636 aa15.31■□□□□ 0.04
CDK18-222ENST00000515494 KIF14Q15058 1648 aa15.31■□□□□ 0.04
CDK18-222ENST00000515494 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
CDK18-222ENST00000515494 NAIPQ13075 1403 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms