RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
SSBP2-219ENST00000515395 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
SSBP2-219ENST00000515395 EEA1Q15075 1411 aa17.07■□□□□ 0.32
SSBP2-219ENST00000515395 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
SSBP2-219ENST00000515395 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
SSBP2-219ENST00000515395 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.31
SSBP2-219ENST00000515395 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
SSBP2-219ENST00000515395 ARAP1Q96P48 1450 aa17■□□□□ 0.31
SSBP2-219ENST00000515395 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
SSBP2-219ENST00000515395 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
SSBP2-219ENST00000515395 PRXQ9BXM0 1461 aa16.99■□□□□ 0.31
SSBP2-219ENST00000515395 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
SSBP2-219ENST00000515395 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
SSBP2-219ENST00000515395 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
SSBP2-219ENST00000515395 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.31
SSBP2-219ENST00000515395 KIF21BO75037 1637 aa16.89■□□□□ 0.29
SSBP2-219ENST00000515395 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
SSBP2-219ENST00000515395 UGGT2Q9NYU1 1516 aa16.85■□□□□ 0.29
SSBP2-219ENST00000515395 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
SSBP2-219ENST00000515395 DISP1Q96F81 1524 aa16.8■□□□□ 0.28
SSBP2-219ENST00000515395 KIAA0556O60303 1618 aa16.8■□□□□ 0.28
SSBP2-219ENST00000515395 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
SSBP2-219ENST00000515395 PTPRGP23470 1445 aa16.78■□□□□ 0.28
SSBP2-219ENST00000515395 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
SSBP2-219ENST00000515395 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
SSBP2-219ENST00000515395 UBTFP17480 764 aaKnown RBP16.77■□□□□ 0.27
SSBP2-219ENST00000515395 ADCY10Q96PN6 1610 aa16.72■□□□□ 0.27
SSBP2-219ENST00000515395 RANGAP1P46060 587 aaPredicted RBP16.72■□□□□ 0.27
SSBP2-219ENST00000515395 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
SSBP2-219ENST00000515395 SAMD9Q5K651 1589 aa16.7■□□□□ 0.26
SSBP2-219ENST00000515395 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
SSBP2-219ENST00000515395 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
SSBP2-219ENST00000515395 UACAQ9BZF9 1416 aa16.67■□□□□ 0.26
SSBP2-219ENST00000515395 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
SSBP2-219ENST00000515395 ABCC2Q92887 1545 aa16.64■□□□□ 0.26
SSBP2-219ENST00000515395 UHRF1BP1LA0JNW5 1464 aa16.64■□□□□ 0.25
SSBP2-219ENST00000515395 PLB1Q6P1J6 1458 aa16.6■□□□□ 0.25
SSBP2-219ENST00000515395 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
SSBP2-219ENST00000515395 ABCA8O94911 1581 aa16.6■□□□□ 0.25
SSBP2-219ENST00000515395 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
SSBP2-219ENST00000515395 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
SSBP2-219ENST00000515395 ZCCHC11Q5TAX3 1644 aaKnown RBP16.57■□□□□ 0.24
SSBP2-219ENST00000515395 KDM5BQ9UGL1 1544 aa16.56■□□□□ 0.24
SSBP2-219ENST00000515395 RAPGEF6Q8TEU7 1601 aa16.56■□□□□ 0.24
SSBP2-219ENST00000515395 KIF13AQ9H1H9 1805 aa16.56■□□□□ 0.24
SSBP2-219ENST00000515395 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
SSBP2-219ENST00000515395 ASXL2Q76L83 1435 aa16.51■□□□□ 0.23
SSBP2-219ENST00000515395 ABCC10Q5T3U5 1492 aa16.5■□□□□ 0.23
SSBP2-219ENST00000515395 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
SSBP2-219ENST00000515395 DIP2BQ9P265 1576 aa16.5■□□□□ 0.23
SSBP2-219ENST00000515395 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
SSBP2-219ENST00000515395 CLIP1P30622 1438 aa16.48■□□□□ 0.23
SSBP2-219ENST00000515395 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
SSBP2-219ENST00000515395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
SSBP2-219ENST00000515395 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
SSBP2-219ENST00000515395 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
SSBP2-219ENST00000515395 ATP10BO94823 1461 aa16.45■□□□□ 0.22
SSBP2-219ENST00000515395 NUP153P49790 1475 aaKnown RBP16.45■□□□□ 0.22
SSBP2-219ENST00000515395 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
SSBP2-219ENST00000515395 WDR7Q9Y4E6 1490 aa16.44■□□□□ 0.22
SSBP2-219ENST00000515395 HECW1Q76N89 1606 aa16.44■□□□□ 0.22
SSBP2-219ENST00000515395 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
SSBP2-219ENST00000515395 GLI2P10070 1586 aa16.42■□□□□ 0.22
SSBP2-219ENST00000515395 EPRSP07814 1512 aaKnown RBP16.41■□□□□ 0.22
SSBP2-219ENST00000515395 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
SSBP2-219ENST00000515395 KCNH8Q96L42 1107 aa16.38■□□□□ 0.21
SSBP2-219ENST00000515395 PCF11O94913 1555 aaKnown RBP16.37■□□□□ 0.21
SSBP2-219ENST00000515395 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
SSBP2-219ENST00000515395 CDK13Q14004 1512 aaKnown RBP16.36■□□□□ 0.21
SSBP2-219ENST00000515395 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
SSBP2-219ENST00000515395 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
SSBP2-219ENST00000515395 LRRIQ1Q96JM4 1722 aa16.35■□□□□ 0.21
SSBP2-219ENST00000515395 CASKIN1Q8WXD9 1431 aa16.35■□□□□ 0.21
SSBP2-219ENST00000515395 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
SSBP2-219ENST00000515395 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
SSBP2-219ENST00000515395 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
SSBP2-219ENST00000515395 PPRC1Q5VV67 1664 aaKnown RBP16.31■□□□□ 0.2
SSBP2-219ENST00000515395 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
SSBP2-219ENST00000515395 TEX14Q8IWB6 1497 aa16.3■□□□□ 0.2
SSBP2-219ENST00000515395 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
SSBP2-219ENST00000515395 KDM6BO15054 1643 aa16.25■□□□□ 0.19
SSBP2-219ENST00000515395 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
SSBP2-219ENST00000515395 KIF14Q15058 1648 aa16.23■□□□□ 0.19
SSBP2-219ENST00000515395 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
SSBP2-219ENST00000515395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSBP2-219ENST00000515395 MSH5O43196 834 aa16.22■□□□□ 0.19
SSBP2-219ENST00000515395 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
SSBP2-219ENST00000515395 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.18
SSBP2-219ENST00000515395 MYO5CQ9NQX4 1742 aa16.2■□□□□ 0.18
SSBP2-219ENST00000515395 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
SSBP2-219ENST00000515395 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
SSBP2-219ENST00000515395 NEO1Q92859 1461 aa16.14■□□□□ 0.17
SSBP2-219ENST00000515395 PHLDB1Q86UU1 1377 aa16.14■□□□□ 0.17
SSBP2-219ENST00000515395 FANCAO15360 1455 aa16.13■□□□□ 0.17
SSBP2-219ENST00000515395 TIAM1Q13009 1591 aa16.12■□□□□ 0.17
SSBP2-219ENST00000515395 EHBP1L1Q8N3D4 1523 aa16.12■□□□□ 0.17
SSBP2-219ENST00000515395 PLCH2O75038 1416 aa16.11■□□□□ 0.17
SSBP2-219ENST00000515395 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
SSBP2-219ENST00000515395 APLP2Q06481 763 aa16.1■□□□□ 0.17
SSBP2-219ENST00000515395 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms