RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
COPB2-212ENST00000514508 KIAA0586Q9BVV6 1533 aa20.8■□□□□ 0.92
COPB2-212ENST00000514508 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
COPB2-212ENST00000514508 EEA1Q15075 1411 aa20.78■□□□□ 0.92
COPB2-212ENST00000514508 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
COPB2-212ENST00000514508 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
COPB2-212ENST00000514508 ERCC6L2Q5T890 1561 aa20.74■□□□□ 0.91
COPB2-212ENST00000514508 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
COPB2-212ENST00000514508 PRG4Q92954 1404 aaPredicted RBP20.73■□□□□ 0.91
COPB2-212ENST00000514508 IQGAP2Q13576 1575 aa20.69■□□□□ 0.9
COPB2-212ENST00000514508 CTTNBP2Q8WZ74 1663 aa20.65■□□□□ 0.9
COPB2-212ENST00000514508 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
COPB2-212ENST00000514508 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
COPB2-212ENST00000514508 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.88
COPB2-212ENST00000514508 KIF21BO75037 1637 aa20.56■□□□□ 0.88
COPB2-212ENST00000514508 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
COPB2-212ENST00000514508 TNIKQ9UKE5 1360 aa20.51■□□□□ 0.87
COPB2-212ENST00000514508 KIAA0556O60303 1618 aa20.49■□□□□ 0.87
COPB2-212ENST00000514508 PTPRGP23470 1445 aa20.49■□□□□ 0.87
COPB2-212ENST00000514508 GOLGA3Q08378 1498 aa20.49■□□□□ 0.87
COPB2-212ENST00000514508 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
COPB2-212ENST00000514508 ADCY10Q96PN6 1610 aa20.42■□□□□ 0.86
COPB2-212ENST00000514508 NPM1P06748 294 aaKnown RBP eCLIP20.39■□□□□ 0.85
COPB2-212ENST00000514508 UBTFP17480 764 aaKnown RBP20.37■□□□□ 0.85
COPB2-212ENST00000514508 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
COPB2-212ENST00000514508 SAMD9Q5K651 1589 aa20.37■□□□□ 0.85
COPB2-212ENST00000514508 UACAQ9BZF9 1416 aa20.36■□□□□ 0.85
COPB2-212ENST00000514508 UHRF1BP1LA0JNW5 1464 aa20.36■□□□□ 0.85
COPB2-212ENST00000514508 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
COPB2-212ENST00000514508 ABCC2Q92887 1545 aa20.33■□□□□ 0.85
COPB2-212ENST00000514508 MAPKBP1O60336 1514 aa20.31■□□□□ 0.84
COPB2-212ENST00000514508 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
COPB2-212ENST00000514508 EFCAB5A4FU69 1503 aa20.29■□□□□ 0.84
COPB2-212ENST00000514508 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
COPB2-212ENST00000514508 ABCA8O94911 1581 aa20.26■□□□□ 0.83
COPB2-212ENST00000514508 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
COPB2-212ENST00000514508 KDM5BQ9UGL1 1544 aa20.25■□□□□ 0.83
COPB2-212ENST00000514508 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
COPB2-212ENST00000514508 FHOD3Q2V2M9 1422 aa20.21■□□□□ 0.83
COPB2-212ENST00000514508 ZCCHC11Q5TAX3 1644 aaKnown RBP20.2■□□□□ 0.82
COPB2-212ENST00000514508 ABCC10Q5T3U5 1492 aa20.2■□□□□ 0.82
COPB2-212ENST00000514508 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
COPB2-212ENST00000514508 ASXL2Q76L83 1435 aa20.17■□□□□ 0.82
COPB2-212ENST00000514508 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
COPB2-212ENST00000514508 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
COPB2-212ENST00000514508 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
COPB2-212ENST00000514508 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
COPB2-212ENST00000514508 ATP10BO94823 1461 aa20.09■□□□□ 0.81
COPB2-212ENST00000514508 GLI2P10070 1586 aa20.08■□□□□ 0.81
COPB2-212ENST00000514508 NUP153P49790 1475 aaKnown RBP20.08■□□□□ 0.81
COPB2-212ENST00000514508 WDR7Q9Y4E6 1490 aa20.08■□□□□ 0.81
COPB2-212ENST00000514508 EPRSP07814 1512 aaKnown RBP20.06■□□□□ 0.8
COPB2-212ENST00000514508 CLIP1P30622 1438 aa20.05■□□□□ 0.8
COPB2-212ENST00000514508 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
COPB2-212ENST00000514508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
COPB2-212ENST00000514508 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
COPB2-212ENST00000514508 TSPOAP1O95153 1857 aa20.02■□□□□ 0.8
COPB2-212ENST00000514508 HECW1Q76N89 1606 aa20■□□□□ 0.79
COPB2-212ENST00000514508 MAP3K4Q9Y6R4 1608 aa19.98■□□□□ 0.79
COPB2-212ENST00000514508 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
COPB2-212ENST00000514508 KCNH8Q96L42 1107 aa19.98■□□□□ 0.79
COPB2-212ENST00000514508 CEP162Q5TB80 1403 aa19.96■□□□□ 0.79
COPB2-212ENST00000514508 CFAP43Q8NDM7 1665 aa19.95■□□□□ 0.78
COPB2-212ENST00000514508 ATP1B4Q9UN42 357 aaPredicted RBP19.95■□□□□ 0.78
COPB2-212ENST00000514508 PLEKHD1A6NEE1 506 aa19.94■□□□□ 0.78
COPB2-212ENST00000514508 PPRC1Q5VV67 1664 aaKnown RBP19.94■□□□□ 0.78
COPB2-212ENST00000514508 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
COPB2-212ENST00000514508 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
COPB2-212ENST00000514508 PCF11O94913 1555 aaKnown RBP19.91■□□□□ 0.78
COPB2-212ENST00000514508 CD109Q6YHK3 1445 aa19.9■□□□□ 0.78
COPB2-212ENST00000514508 TEX14Q8IWB6 1497 aa19.9■□□□□ 0.78
COPB2-212ENST00000514508 LRRIQ1Q96JM4 1722 aa19.9■□□□□ 0.78
COPB2-212ENST00000514508 ABCA9Q8IUA7 1624 aa19.89■□□□□ 0.77
COPB2-212ENST00000514508 FYCO1Q9BQS8 1478 aa19.88■□□□□ 0.77
COPB2-212ENST00000514508 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
COPB2-212ENST00000514508 CCDC18Q5T9S5 1454 aa19.87■□□□□ 0.77
COPB2-212ENST00000514508 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
COPB2-212ENST00000514508 KDM6BO15054 1643 aa19.85■□□□□ 0.77
COPB2-212ENST00000514508 TROQ12816 1431 aaPredicted RBP19.79■□□□□ 0.76
COPB2-212ENST00000514508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.79■□□□□ 0.76
COPB2-212ENST00000514508 TTC37Q6PGP7 1564 aa19.76■□□□□ 0.75
COPB2-212ENST00000514508 KIF14Q15058 1648 aa19.76■□□□□ 0.75
COPB2-212ENST00000514508 PHLDB1Q86UU1 1377 aa19.74■□□□□ 0.75
COPB2-212ENST00000514508 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
COPB2-212ENST00000514508 NEO1Q92859 1461 aa19.73■□□□□ 0.75
COPB2-212ENST00000514508 COL17A1Q9UMD9 1497 aaPredicted RBP19.73■□□□□ 0.75
COPB2-212ENST00000514508 MYO5CQ9NQX4 1742 aa19.71■□□□□ 0.75
COPB2-212ENST00000514508 ARAP3Q8WWN8 1544 aa19.7■□□□□ 0.74
COPB2-212ENST00000514508 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
COPB2-212ENST00000514508 PLCH2O75038 1416 aa19.68■□□□□ 0.74
COPB2-212ENST00000514508 FANCAO15360 1455 aa19.67■□□□□ 0.74
COPB2-212ENST00000514508 MTUS2Q5JR59 1369 aa19.64■□□□□ 0.73
COPB2-212ENST00000514508 AKNAQ7Z591 1439 aa19.64■□□□□ 0.73
COPB2-212ENST00000514508 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
COPB2-212ENST00000514508 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
COPB2-212ENST00000514508 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
COPB2-212ENST00000514508 CDC42BPBQ9Y5S2 1711 aa19.6■□□□□ 0.73
COPB2-212ENST00000514508 PREX2Q70Z35 1606 aa19.6■□□□□ 0.73
COPB2-212ENST00000514508 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
COPB2-212ENST00000514508 MAP3K1Q13233 1512 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms