RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
COPG1-209ENST00000514478 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
COPG1-209ENST00000514478 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
COPG1-209ENST00000514478 MAGI1Q96QZ7 1491 aaPredicted RBP14.17□□□□□ -0.14
COPG1-209ENST00000514478 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
COPG1-209ENST00000514478 GRIN2BQ13224 1484 aa14.15□□□□□ -0.14
COPG1-209ENST00000514478 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
COPG1-209ENST00000514478 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
COPG1-209ENST00000514478 CLASP1Q7Z460 1538 aa14.11□□□□□ -0.15
COPG1-209ENST00000514478 RANGAP1P46060 587 aaPredicted RBP14.11□□□□□ -0.15
COPG1-209ENST00000514478 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
COPG1-209ENST00000514478 CLIP1P30622 1438 aa14.08□□□□□ -0.15
COPG1-209ENST00000514478 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
COPG1-209ENST00000514478 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
COPG1-209ENST00000514478 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
COPG1-209ENST00000514478 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
COPG1-209ENST00000514478 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
COPG1-209ENST00000514478 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
COPG1-209ENST00000514478 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
COPG1-209ENST00000514478 SAMD9Q5K651 1589 aa13.91□□□□□ -0.18
COPG1-209ENST00000514478 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
COPG1-209ENST00000514478 APLP2Q06481 763 aa13.88□□□□□ -0.19
COPG1-209ENST00000514478 KIAA0586Q9BVV6 1533 aa13.88□□□□□ -0.19
COPG1-209ENST00000514478 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
COPG1-209ENST00000514478 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
COPG1-209ENST00000514478 PPARGC1BQ86YN6 1023 aaKnown RBP13.86□□□□□ -0.19
COPG1-209ENST00000514478 FHOD3Q2V2M9 1422 aa13.86□□□□□ -0.19
COPG1-209ENST00000514478 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
COPG1-209ENST00000514478 NUP160Q12769 1436 aa13.84□□□□□ -0.19
COPG1-209ENST00000514478 SHROOM2Q13796 1616 aa13.84□□□□□ -0.19
COPG1-209ENST00000514478 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
COPG1-209ENST00000514478 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
COPG1-209ENST00000514478 TTBK1Q5TCY1 1321 aaPredicted RBP13.81□□□□□ -0.2
COPG1-209ENST00000514478 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
COPG1-209ENST00000514478 CFAP43Q8NDM7 1665 aa13.79□□□□□ -0.2
COPG1-209ENST00000514478 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
COPG1-209ENST00000514478 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
COPG1-209ENST00000514478 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
COPG1-209ENST00000514478 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
COPG1-209ENST00000514478 DISP1Q96F81 1524 aa13.75□□□□□ -0.21
COPG1-209ENST00000514478 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
COPG1-209ENST00000514478 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
COPG1-209ENST00000514478 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
COPG1-209ENST00000514478 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
COPG1-209ENST00000514478 PCGF6Q9BYE7 350 aa13.74□□□□□ -0.21
COPG1-209ENST00000514478 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
COPG1-209ENST00000514478 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
COPG1-209ENST00000514478 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
COPG1-209ENST00000514478 KDM6BO15054 1643 aa13.72□□□□□ -0.21
COPG1-209ENST00000514478 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
COPG1-209ENST00000514478 MAPKBP1O60336 1514 aa13.71□□□□□ -0.21
COPG1-209ENST00000514478 RAPGEF6Q8TEU7 1601 aa13.71□□□□□ -0.22
COPG1-209ENST00000514478 MAP3K1Q13233 1512 aa13.7□□□□□ -0.22
COPG1-209ENST00000514478 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
COPG1-209ENST00000514478 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
COPG1-209ENST00000514478 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
COPG1-209ENST00000514478 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
COPG1-209ENST00000514478 KANK4Q5T7N3 995 aaPredicted RBP13.64□□□□□ -0.23
COPG1-209ENST00000514478 LRRC9Q6ZRR7 1453 aa13.63□□□□□ -0.23
COPG1-209ENST00000514478 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
COPG1-209ENST00000514478 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
COPG1-209ENST00000514478 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
COPG1-209ENST00000514478 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
COPG1-209ENST00000514478 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
COPG1-209ENST00000514478 ABCA8O94911 1581 aa13.59□□□□□ -0.23
COPG1-209ENST00000514478 PTPRGP23470 1445 aa13.59□□□□□ -0.23
COPG1-209ENST00000514478 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
COPG1-209ENST00000514478 PLB1Q6P1J6 1458 aa13.59□□□□□ -0.23
COPG1-209ENST00000514478 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.23
COPG1-209ENST00000514478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
COPG1-209ENST00000514478 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
COPG1-209ENST00000514478 NUP153P49790 1475 aaKnown RBP13.57□□□□□ -0.24
COPG1-209ENST00000514478 MAGI3Q5TCQ9 1506 aa13.53□□□□□ -0.24
COPG1-209ENST00000514478 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
COPG1-209ENST00000514478 UACAQ9BZF9 1416 aa13.51□□□□□ -0.25
COPG1-209ENST00000514478 ABCC2Q92887 1545 aa13.5□□□□□ -0.25
COPG1-209ENST00000514478 TEX14Q8IWB6 1497 aa13.5□□□□□ -0.25
COPG1-209ENST00000514478 GLI2P10070 1586 aa13.49□□□□□ -0.25
COPG1-209ENST00000514478 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
COPG1-209ENST00000514478 ZCCHC11Q5TAX3 1644 aaKnown RBP13.48□□□□□ -0.25
COPG1-209ENST00000514478 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
COPG1-209ENST00000514478 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
COPG1-209ENST00000514478 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
COPG1-209ENST00000514478 ATP10BO94823 1461 aa13.47□□□□□ -0.25
COPG1-209ENST00000514478 KIF14Q15058 1648 aa13.46□□□□□ -0.25
COPG1-209ENST00000514478 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
COPG1-209ENST00000514478 KDM4FA0A1W2PPD8 638 aa13.45□□□□□ -0.26
COPG1-209ENST00000514478 TROQ12816 1431 aaPredicted RBP13.45□□□□□ -0.26
COPG1-209ENST00000514478 PTPN23Q9H3S7 1636 aa13.44□□□□□ -0.26
COPG1-209ENST00000514478 PLEKHD1A6NEE1 506 aa13.44□□□□□ -0.26
COPG1-209ENST00000514478 UHRF1BP1LA0JNW5 1464 aa13.43□□□□□ -0.26
COPG1-209ENST00000514478 FAM50AQ14320 339 aaKnown RBP13.43□□□□□ -0.26
COPG1-209ENST00000514478 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
COPG1-209ENST00000514478 ASXL2Q76L83 1435 aa13.43□□□□□ -0.26
COPG1-209ENST00000514478 MAP3K4Q9Y6R4 1608 aa13.42□□□□□ -0.26
COPG1-209ENST00000514478 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
COPG1-209ENST00000514478 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
COPG1-209ENST00000514478 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
COPG1-209ENST00000514478 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
COPG1-209ENST00000514478 ITGAEP38570 1179 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms