RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 NISCHQ9Y2I1 1504 aa20.26■□□□□ 0.83
COPG1-209ENST00000514478 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
COPG1-209ENST00000514478 ABCC9O60706 1549 aa17.69■□□□□ 0.42
COPG1-209ENST00000514478 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
COPG1-209ENST00000514478 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
COPG1-209ENST00000514478 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
COPG1-209ENST00000514478 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
COPG1-209ENST00000514478 NACADO15069 1562 aa16.72■□□□□ 0.27
COPG1-209ENST00000514478 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
COPG1-209ENST00000514478 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
COPG1-209ENST00000514478 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
COPG1-209ENST00000514478 SHROOM4Q9ULL8 1493 aa16.5■□□□□ 0.23
COPG1-209ENST00000514478 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
COPG1-209ENST00000514478 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.212e-9■■□□□ 13.7
COPG1-209ENST00000514478 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
COPG1-209ENST00000514478 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
COPG1-209ENST00000514478 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
COPG1-209ENST00000514478 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
COPG1-209ENST00000514478 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
COPG1-209ENST00000514478 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
COPG1-209ENST00000514478 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
COPG1-209ENST00000514478 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
COPG1-209ENST00000514478 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
COPG1-209ENST00000514478 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
COPG1-209ENST00000514478 WIZO95785 1651 aa15.6■□□□□ 0.09
COPG1-209ENST00000514478 CUX2O14529 1486 aa15.52■□□□□ 0.07
COPG1-209ENST00000514478 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
COPG1-209ENST00000514478 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
COPG1-209ENST00000514478 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
COPG1-209ENST00000514478 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
COPG1-209ENST00000514478 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
COPG1-209ENST00000514478 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
COPG1-209ENST00000514478 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
COPG1-209ENST00000514478 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
COPG1-209ENST00000514478 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
COPG1-209ENST00000514478 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
COPG1-209ENST00000514478 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
COPG1-209ENST00000514478 PDS5BQ9NTI5 1447 aa15.06■□□□□ 0
COPG1-209ENST00000514478 NESP48681 1621 aa15.06■□□□□ 0
COPG1-209ENST00000514478 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
COPG1-209ENST00000514478 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
COPG1-209ENST00000514478 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
COPG1-209ENST00000514478 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
COPG1-209ENST00000514478 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
COPG1-209ENST00000514478 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
COPG1-209ENST00000514478 CFTRP13569 1480 aa14.85□□□□□ -0.03
COPG1-209ENST00000514478 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
COPG1-209ENST00000514478 WDR62O43379 1518 aa14.83□□□□□ -0.04
COPG1-209ENST00000514478 CEP164Q9UPV0 1460 aa14.81□□□□□ -0.04
COPG1-209ENST00000514478 WRNQ14191 1432 aaPredicted RBP eCLIP14.76□□□□□ -0.05
COPG1-209ENST00000514478 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
COPG1-209ENST00000514478 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
COPG1-209ENST00000514478 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
COPG1-209ENST00000514478 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
COPG1-209ENST00000514478 FANCD2Q9BXW9 1451 aa14.7□□□□□ -0.06
COPG1-209ENST00000514478 CUX1P39880 1505 aa14.65□□□□□ -0.06
COPG1-209ENST00000514478 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
COPG1-209ENST00000514478 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
COPG1-209ENST00000514478 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
COPG1-209ENST00000514478 RIMBP3BA6NNM3 1639 aa14.55□□□□□ -0.08
COPG1-209ENST00000514478 RIMBP3Q9UFD9 1639 aa14.55□□□□□ -0.08
COPG1-209ENST00000514478 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
COPG1-209ENST00000514478 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
COPG1-209ENST00000514478 SOGA1O94964 1423 aa14.52□□□□□ -0.08
COPG1-209ENST00000514478 EEA1Q15075 1411 aa14.51□□□□□ -0.09
COPG1-209ENST00000514478 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
COPG1-209ENST00000514478 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
COPG1-209ENST00000514478 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
COPG1-209ENST00000514478 LOC105371045A0A1W2PR82 267 aa14.46□□□□□ -0.09
COPG1-209ENST00000514478 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
COPG1-209ENST00000514478 ARHGEF11O15085 1522 aa14.44□□□□□ -0.1
COPG1-209ENST00000514478 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
COPG1-209ENST00000514478 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
COPG1-209ENST00000514478 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
COPG1-209ENST00000514478 CHD1O14646 1710 aa14.41□□□□□ -0.1
COPG1-209ENST00000514478 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
COPG1-209ENST00000514478 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
COPG1-209ENST00000514478 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
COPG1-209ENST00000514478 KIF21BO75037 1637 aa14.38□□□□□ -0.11
COPG1-209ENST00000514478 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
COPG1-209ENST00000514478 ABCA10Q8WWZ4 1543 aa14.36□□□□□ -0.11
COPG1-209ENST00000514478 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
COPG1-209ENST00000514478 GOLGA3Q08378 1498 aa14.33□□□□□ -0.12
COPG1-209ENST00000514478 ZNF608Q9ULD9 1512 aaPredicted RBP14.33□□□□□ -0.12
COPG1-209ENST00000514478 CYB5RLQ6IPT4 315 aa14.33□□□□□ -0.12
COPG1-209ENST00000514478 PBRM1Q86U86 1689 aa14.33□□□□□ -0.12
COPG1-209ENST00000514478 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
COPG1-209ENST00000514478 FBLN2P98095 1184 aa14.3□□□□□ -0.12
COPG1-209ENST00000514478 UBTFP17480 764 aaKnown RBP14.29□□□□□ -0.12
COPG1-209ENST00000514478 CUL7Q14999 1698 aa14.29□□□□□ -0.12
COPG1-209ENST00000514478 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
COPG1-209ENST00000514478 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
COPG1-209ENST00000514478 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
COPG1-209ENST00000514478 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
COPG1-209ENST00000514478 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
COPG1-209ENST00000514478 PRXQ9BXM0 1461 aa14.24□□□□□ -0.13
COPG1-209ENST00000514478 IGF1RP08069 1367 aa14.22□□□□□ -0.13
COPG1-209ENST00000514478 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
COPG1-209ENST00000514478 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.14
COPG1-209ENST00000514478 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.142e-8■■■■■ 41.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms