RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 RUSC2Q8N2Y8 1516 aa34.46■■■■□ 3.11
HMGCS1-206ENST00000511774 ABCC10Q5T3U5 1492 aa34.45■■■■□ 3.1
HMGCS1-206ENST00000511774 FAM69CQ0P6D2 419 aa34.41■■■■□ 3.1
HMGCS1-206ENST00000511774 ADCY10Q96PN6 1610 aa34.38■■■■□ 3.09
HMGCS1-206ENST00000511774 DIP2BQ9P265 1576 aa34.38■■■■□ 3.09
HMGCS1-206ENST00000511774 MAPKBP1O60336 1514 aa34.37■■■■□ 3.09
HMGCS1-206ENST00000511774 KDM4FA0A1W2PPD8 638 aa34.23■■■■□ 3.07
HMGCS1-206ENST00000511774 NPM1P06748 294 aaKnown RBP eCLIP34.23■■■■□ 3.07
HMGCS1-206ENST00000511774 TSPOAP1O95153 1857 aa34.21■■■■□ 3.07
HMGCS1-206ENST00000511774 KDM6BO15054 1643 aa34.21■■■■□ 3.07
HMGCS1-206ENST00000511774 KIAA0586Q9BVV6 1533 aa34.15■■■■□ 3.06
HMGCS1-206ENST00000511774 IGF1RP08069 1367 aa34.09■■■■□ 3.05
HMGCS1-206ENST00000511774 CUL7Q14999 1698 aa34■■■■□ 3.03
HMGCS1-206ENST00000511774 PPRC1Q5VV67 1664 aaKnown RBP33.95■■■■□ 3.03
HMGCS1-206ENST00000511774 PTPRGP23470 1445 aa33.95■■■■□ 3.02
HMGCS1-206ENST00000511774 KIF27Q86VH2 1401 aa33.92■■■■□ 3.02
HMGCS1-206ENST00000511774 TTBK1Q5TCY1 1321 aaPredicted RBP33.91■■■■□ 3.02
HMGCS1-206ENST00000511774 ABCC2Q92887 1545 aa33.89■■■■□ 3.02
HMGCS1-206ENST00000511774 ASXL2Q76L83 1435 aa33.85■■■■□ 3.01
HMGCS1-206ENST00000511774 ILDR1Q86SU0 546 aaPredicted RBP33.83■■■■□ 3.01
HMGCS1-206ENST00000511774 TNIKQ9UKE5 1360 aa33.83■■■■□ 3.01
HMGCS1-206ENST00000511774 GLI2P10070 1586 aa33.82■■■■□ 3
HMGCS1-206ENST00000511774 CARMIL1Q5VZK9 1371 aa33.8■■■■□ 3
HMGCS1-206ENST00000511774 PLB1Q6P1J6 1458 aa33.77■■■■□ 3
HMGCS1-206ENST00000511774 COL17A1Q9UMD9 1497 aaPredicted RBP33.77■■■■□ 3
HMGCS1-206ENST00000511774 ADGRL1O94910 1474 aa33.76■■■■□ 3
HMGCS1-206ENST00000511774 CARMIL2Q6F5E8 1435 aa33.75■■■□□ 2.99
HMGCS1-206ENST00000511774 IQGAP2Q13576 1575 aa33.74■■■□□ 2.99
HMGCS1-206ENST00000511774 UHRF1BP1LA0JNW5 1464 aa33.74■■■□□ 2.99
HMGCS1-206ENST00000511774 DISP1Q96F81 1524 aa33.7■■■□□ 2.99
HMGCS1-206ENST00000511774 UACAQ9BZF9 1416 aa33.68■■■□□ 2.98
HMGCS1-206ENST00000511774 MAP3K4Q9Y6R4 1608 aa33.66■■■□□ 2.98
HMGCS1-206ENST00000511774 EPRSP07814 1512 aaKnown RBP33.65■■■□□ 2.98
HMGCS1-206ENST00000511774 KDM5BQ9UGL1 1544 aa33.62■■■□□ 2.97
HMGCS1-206ENST00000511774 ZCCHC11Q5TAX3 1644 aaKnown RBP33.59■■■□□ 2.97
HMGCS1-206ENST00000511774 HECW2Q9P2P5 1572 aa33.53■■■□□ 2.96
HMGCS1-206ENST00000511774 UGGT2Q9NYU1 1516 aa33.52■■■□□ 2.96
HMGCS1-206ENST00000511774 KIAA0556O60303 1618 aa33.48■■■□□ 2.95
HMGCS1-206ENST00000511774 TEX14Q8IWB6 1497 aa33.48■■■□□ 2.95
HMGCS1-206ENST00000511774 RAPGEF2Q9Y4G8 1499 aa33.4■■■□□ 2.94
HMGCS1-206ENST00000511774 WDR7Q9Y4E6 1490 aa33.39■■■□□ 2.94
HMGCS1-206ENST00000511774 MAGI3Q5TCQ9 1506 aa33.26■■■□□ 2.91
HMGCS1-206ENST00000511774 CFAP43Q8NDM7 1665 aa33.26■■■□□ 2.91
HMGCS1-206ENST00000511774 CD109Q6YHK3 1445 aa33.24■■■□□ 2.91
HMGCS1-206ENST00000511774 ABCA8O94911 1581 aa33.24■■■□□ 2.91
HMGCS1-206ENST00000511774 CTTNBP2Q8WZ74 1663 aa33.23■■■□□ 2.91
HMGCS1-206ENST00000511774 KCNH8Q96L42 1107 aa33.19■■■□□ 2.9
HMGCS1-206ENST00000511774 KIF21BO75037 1637 aa33.19■■■□□ 2.9
HMGCS1-206ENST00000511774 GOLGA3Q08378 1498 aa33.08■■■□□ 2.89
HMGCS1-206ENST00000511774 ARAP3Q8WWN8 1544 aa33.02■■■□□ 2.88
HMGCS1-206ENST00000511774 ARID3CA6NKF2 412 aa32.98■■■□□ 2.87
HMGCS1-206ENST00000511774 ADAMTSL3P82987 1691 aa32.95■■■□□ 2.87
HMGCS1-206ENST00000511774 PRXQ9BXM0 1461 aa32.95■■■□□ 2.87
HMGCS1-206ENST00000511774 ATP10BO94823 1461 aa32.94■■■□□ 2.86
HMGCS1-206ENST00000511774 PTPRMP28827 1452 aa32.91■■■□□ 2.86
HMGCS1-206ENST00000511774 ABCA9Q8IUA7 1624 aa32.91■■■□□ 2.86
HMGCS1-206ENST00000511774 FBXO41Q8TF61 875 aa32.89■■■□□ 2.86
HMGCS1-206ENST00000511774 P3H3Q8IVL6 736 aa32.86■■■□□ 2.85
HMGCS1-206ENST00000511774 RAPGEF3O95398 923 aa32.85■■■□□ 2.85
HMGCS1-206ENST00000511774 FRMPD1Q5SYB0 1578 aa32.83■■■□□ 2.85
HMGCS1-206ENST00000511774 BCORL1Q5H9F3 1711 aa32.8■■■□□ 2.84
HMGCS1-206ENST00000511774 MADDQ8WXG6 1647 aa32.77■■■□□ 2.84
HMGCS1-206ENST00000511774 PHLDB1Q86UU1 1377 aa32.76■■■□□ 2.83
HMGCS1-206ENST00000511774 NEO1Q92859 1461 aa32.74■■■□□ 2.83
HMGCS1-206ENST00000511774 SAMD9Q5K651 1589 aa32.73■■■□□ 2.83
HMGCS1-206ENST00000511774 RAPGEF6Q8TEU7 1601 aa32.72■■■□□ 2.83
HMGCS1-206ENST00000511774 PCF11O94913 1555 aaKnown RBP32.71■■■□□ 2.83
HMGCS1-206ENST00000511774 LMTK3Q96Q04 1460 aa32.7■■■□□ 2.83
HMGCS1-206ENST00000511774 RIMS1Q86UR5 1692 aaKnown RBP32.63■■■□□ 2.81
HMGCS1-206ENST00000511774 NUP153P49790 1475 aaKnown RBP32.63■■■□□ 2.81
HMGCS1-206ENST00000511774 ARID4BQ4LE39 1312 aaPredicted RBP32.62■■■□□ 2.81
HMGCS1-206ENST00000511774 ARHGEF40Q8TER5 1519 aa32.61■■■□□ 2.81
HMGCS1-206ENST00000511774 RICTORQ6R327 1708 aa32.6■■■□□ 2.81
HMGCS1-206ENST00000511774 SIGLEC1Q9BZZ2 1709 aa32.57■■■□□ 2.81
HMGCS1-206ENST00000511774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.56■■■□□ 2.8
HMGCS1-206ENST00000511774 HNRNPUL2Q1KMD3 747 aaKnown RBP32.56■■■□□ 2.8
HMGCS1-206ENST00000511774 FAM9AQ8IZU1 332 aaPredicted RBP32.56■■■□□ 2.8
HMGCS1-206ENST00000511774 DENND4BO75064 1496 aaPredicted RBP32.51■■■□□ 2.79
HMGCS1-206ENST00000511774 HSPA2P54652 639 aa32.51■■■□□ 2.79
HMGCS1-206ENST00000511774 FHOD3Q2V2M9 1422 aa32.49■■■□□ 2.79
HMGCS1-206ENST00000511774 AKNAQ7Z591 1439 aa32.48■■■□□ 2.79
HMGCS1-206ENST00000511774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.46■■■□□ 2.791e-15■□□□□ 9.2
HMGCS1-206ENST00000511774 CSRNP3Q8WYN3 585 aa32.45■■■□□ 2.79
HMGCS1-206ENST00000511774 FANCAO15360 1455 aa32.44■■■□□ 2.78
HMGCS1-206ENST00000511774 TTC37Q6PGP7 1564 aa32.44■■■□□ 2.78
HMGCS1-206ENST00000511774 YEATS2Q9ULM3 1422 aa32.43■■■□□ 2.78
HMGCS1-206ENST00000511774 RANGAP1P46060 587 aaPredicted RBP32.43■■■□□ 2.78
HMGCS1-206ENST00000511774 ZMYM4Q5VZL5 1548 aa32.42■■■□□ 2.78
HMGCS1-206ENST00000511774 PLPPR3Q6T4P5 718 aa32.42■■■□□ 2.78
HMGCS1-206ENST00000511774 CFAP74Q9C0B2 1584 aa32.39■■■□□ 2.78
HMGCS1-206ENST00000511774 ZFYVE16Q7Z3T8 1539 aa32.37■■■□□ 2.77
HMGCS1-206ENST00000511774 PLEKHD1A6NEE1 506 aa32.37■■■□□ 2.77
HMGCS1-206ENST00000511774 HECW1Q76N89 1606 aa32.33■■■□□ 2.77
HMGCS1-206ENST00000511774 EFCAB5A4FU69 1503 aa32.32■■■□□ 2.76
HMGCS1-206ENST00000511774 FER1L4A9Z1Z3 1794 aa32.32■■■□□ 2.76
HMGCS1-206ENST00000511774 POGZQ7Z3K3 1410 aa32.31■■■□□ 2.76
HMGCS1-206ENST00000511774 MLECQ14165 292 aa32.29■■■□□ 2.76
HMGCS1-206ENST00000511774 CDK13Q14004 1512 aaKnown RBP32.28■■■□□ 2.76
HMGCS1-206ENST00000511774 CERKQ8TCT0 537 aa32.28■■■□□ 2.76
HMGCS1-206ENST00000511774 MAGI2Q86UL8 1455 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms