RNA–Protein interactions for RNA: ENST00000511377.5

CTNND2-214, Transcript of catenin delta 2, humanhuman

TSL 1 (best) BASIC

Gene CTNND2, Length 4,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-214ENST00000511377 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
CTNND2-214ENST00000511377 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.11
CTNND2-214ENST00000511377 FHAD1B1AJZ9 1412 aa22.01■■□□□ 1.11
CTNND2-214ENST00000511377 PDS5BQ9NTI5 1447 aa22.01■■□□□ 1.11
CTNND2-214ENST00000511377 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
CTNND2-214ENST00000511377 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
CTNND2-214ENST00000511377 KDM2AQ9Y2K7 1162 aa21.98■■□□□ 1.11
CTNND2-214ENST00000511377 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
CTNND2-214ENST00000511377 SIN3AQ96ST3 1273 aa21.97■■□□□ 1.11
CTNND2-214ENST00000511377 HNRNPUQ00839 825 aaKnown RBP eCLIP21.86■■□□□ 1.09
CTNND2-214ENST00000511377 FAM9BQ8IZU0 186 aa21.86■■□□□ 1.09
CTNND2-214ENST00000511377 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
CTNND2-214ENST00000511377 EIF4G2P78344 907 aaKnown RBP eCLIP21.82■■□□□ 1.08
CTNND2-214ENST00000511377 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
CTNND2-214ENST00000511377 FHOD3Q2V2M9 1422 aa21.79■■□□□ 1.08
CTNND2-214ENST00000511377 RGL3Q3MIN7 710 aa21.78■■□□□ 1.08
CTNND2-214ENST00000511377 DAXXQ9UER7 740 aaPredicted RBP21.77■■□□□ 1.08
CTNND2-214ENST00000511377 CLSPNQ9HAW4 1339 aa21.77■■□□□ 1.08
CTNND2-214ENST00000511377 FKBP8Q14318 412 aa21.74■■□□□ 1.07
CTNND2-214ENST00000511377 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
CTNND2-214ENST00000511377 STAG3Q9UJ98 1225 aa21.73■■□□□ 1.07
CTNND2-214ENST00000511377 SALL2Q9Y467 1007 aaPredicted RBP21.72■■□□□ 1.07
CTNND2-214ENST00000511377 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
CTNND2-214ENST00000511377 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
CTNND2-214ENST00000511377 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
CTNND2-214ENST00000511377 MRS2Q9HD23 443 aa21.71■■□□□ 1.07
CTNND2-214ENST00000511377 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
CTNND2-214ENST00000511377 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
CTNND2-214ENST00000511377 IGF1RP08069 1367 aa21.69■■□□□ 1.06
CTNND2-214ENST00000511377 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
CTNND2-214ENST00000511377 TMC1Q8TDI8 760 aa21.67■■□□□ 1.06
CTNND2-214ENST00000511377 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
CTNND2-214ENST00000511377 RAB3GAP2Q9H2M9 1393 aa21.66■■□□□ 1.06
CTNND2-214ENST00000511377 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
CTNND2-214ENST00000511377 FOXD1Q16676 465 aa21.61■■□□□ 1.05
CTNND2-214ENST00000511377 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
CTNND2-214ENST00000511377 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
CTNND2-214ENST00000511377 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
CTNND2-214ENST00000511377 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
CTNND2-214ENST00000511377 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
CTNND2-214ENST00000511377 SENP3-EIF4A1A0A087X0R7 540 aa21.55■■□□□ 1.04
CTNND2-214ENST00000511377 CFTRP13569 1480 aa21.54■■□□□ 1.04
CTNND2-214ENST00000511377 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
CTNND2-214ENST00000511377 NEFMP07197 916 aa21.5■■□□□ 1.03
CTNND2-214ENST00000511377 IRX6P78412 446 aaPredicted RBP21.5■■□□□ 1.03
CTNND2-214ENST00000511377 NESP48681 1621 aa21.49■■□□□ 1.03
CTNND2-214ENST00000511377 TIMELESSQ9UNS1 1208 aa21.48■■□□□ 1.03
CTNND2-214ENST00000511377 GAPVD1Q14C86 1478 aa21.48■■□□□ 1.03
CTNND2-214ENST00000511377 PKD2Q13563 968 aa21.46■■□□□ 1.03
CTNND2-214ENST00000511377 BCL11AQ9H165 835 aa21.45■■□□□ 1.02
CTNND2-214ENST00000511377 DCAF11Q8TEB1 546 aa21.45■■□□□ 1.02
CTNND2-214ENST00000511377 MPHOSPH9Q99550 1183 aa21.45■■□□□ 1.02
CTNND2-214ENST00000511377 SLC24A1O60721 1099 aa21.44■■□□□ 1.02
CTNND2-214ENST00000511377 MYT1Q01538 1121 aa21.43■■□□□ 1.02
CTNND2-214ENST00000511377 KIF21BO75037 1637 aa21.43■■□□□ 1.02
CTNND2-214ENST00000511377 DHX57Q6P158 1386 aaKnown RBP21.41■■□□□ 1.02
CTNND2-214ENST00000511377 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
CTNND2-214ENST00000511377 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
CTNND2-214ENST00000511377 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
CTNND2-214ENST00000511377 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
CTNND2-214ENST00000511377 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
CTNND2-214ENST00000511377 HNRNPMP52272 730 aaKnown RBP eCLIP21.37■■□□□ 1.01
CTNND2-214ENST00000511377 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
CTNND2-214ENST00000511377 CUX1P39880 1505 aa21.36■■□□□ 1.01
CTNND2-214ENST00000511377 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
CTNND2-214ENST00000511377 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
CTNND2-214ENST00000511377 NUP155O75694 1391 aa21.34■■□□□ 1.01
CTNND2-214ENST00000511377 RTL5Q5HYW3 569 aaPredicted RBP21.33■■□□□ 1
CTNND2-214ENST00000511377 CCDC18Q5T9S5 1454 aa21.33■■□□□ 1
CTNND2-214ENST00000511377 TOP2BQ02880 1626 aa21.32■■□□□ 1
CTNND2-214ENST00000511377 PRXQ9BXM0 1461 aa21.31■■□□□ 1
CTNND2-214ENST00000511377 EFCAB2Q5VUJ9 269 aa21.3■■□□□ 1
CTNND2-214ENST00000511377 L3MBTL2Q969R5 705 aa21.3■■□□□ 1
CTNND2-214ENST00000511377 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
CTNND2-214ENST00000511377 ANKRD30AQ9BXX3 1397 aa21.3■■□□□ 1
CTNND2-214ENST00000511377 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
CTNND2-214ENST00000511377 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
CTNND2-214ENST00000511377 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
CTNND2-214ENST00000511377 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
CTNND2-214ENST00000511377 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
CTNND2-214ENST00000511377 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
CTNND2-214ENST00000511377 GGT6Q6P531 493 aa21.25■□□□□ 0.99
CTNND2-214ENST00000511377 SUPT16HQ9Y5B9 1047 aaKnown RBP21.25■□□□□ 0.99
CTNND2-214ENST00000511377 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
CTNND2-214ENST00000511377 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
CTNND2-214ENST00000511377 CDCA8Q53HL2 280 aa21.22■□□□□ 0.99
CTNND2-214ENST00000511377 PTPRGP23470 1445 aa21.22■□□□□ 0.99
CTNND2-214ENST00000511377 CC2D1BQ5T0F9 858 aaKnown RBP21.2■□□□□ 0.99
CTNND2-214ENST00000511377 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
CTNND2-214ENST00000511377 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.98
CTNND2-214ENST00000511377 LRRC9Q6ZRR7 1453 aa21.19■□□□□ 0.98
CTNND2-214ENST00000511377 ANP32AP39687 249 aaKnown RBP21.18■□□□□ 0.98
CTNND2-214ENST00000511377 KANK1Q14678 1352 aa21.17■□□□□ 0.98
CTNND2-214ENST00000511377 MLECQ14165 292 aa21.17■□□□□ 0.98
CTNND2-214ENST00000511377 FGD6Q6ZV73 1430 aa21.16■□□□□ 0.98
CTNND2-214ENST00000511377 KIF3BO15066 747 aa21.14■□□□□ 0.98
CTNND2-214ENST00000511377 TMF1P82094 1093 aa21.13■□□□□ 0.97
CTNND2-214ENST00000511377 TNNT2P45379 298 aaPredicted RBP21.13■□□□□ 0.97
CTNND2-214ENST00000511377 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
CTNND2-214ENST00000511377 CCER2I3L3R5 266 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms