RNA–Protein interactions for RNA: ENST00000511377.5

CTNND2-214, Transcript of catenin delta 2, humanhuman

TSL 1 (best) BASIC

Gene CTNND2, Length 4,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-214ENST00000511377 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
CTNND2-214ENST00000511377 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
CTNND2-214ENST00000511377 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
CTNND2-214ENST00000511377 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
CTNND2-214ENST00000511377 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
CTNND2-214ENST00000511377 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.69
CTNND2-214ENST00000511377 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
CTNND2-214ENST00000511377 PCGF6Q9BYE7 350 aa25.15■■□□□ 1.62
CTNND2-214ENST00000511377 ABCC9O60706 1549 aa25.05■■□□□ 1.6
CTNND2-214ENST00000511377 TTBK1Q5TCY1 1321 aaPredicted RBP25.05■■□□□ 1.6
CTNND2-214ENST00000511377 APLP2Q06481 763 aa24.94■■□□□ 1.58
CTNND2-214ENST00000511377 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
CTNND2-214ENST00000511377 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
CTNND2-214ENST00000511377 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
CTNND2-214ENST00000511377 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.55
CTNND2-214ENST00000511377 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
CTNND2-214ENST00000511377 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
CTNND2-214ENST00000511377 PPARGC1BQ86YN6 1023 aaKnown RBP24.56■■□□□ 1.52
CTNND2-214ENST00000511377 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.49
CTNND2-214ENST00000511377 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.49
CTNND2-214ENST00000511377 CCER1Q8TC90 406 aaPredicted RBP24.34■■□□□ 1.49
CTNND2-214ENST00000511377 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
CTNND2-214ENST00000511377 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
CTNND2-214ENST00000511377 SCRIBQ14160 1630 aa24.18■■□□□ 1.46
CTNND2-214ENST00000511377 HRCP23327 699 aa23.98■■□□□ 1.43
CTNND2-214ENST00000511377 ITGAEP38570 1179 aa23.82■■□□□ 1.4
CTNND2-214ENST00000511377 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
CTNND2-214ENST00000511377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.64■■□□□ 1.38
CTNND2-214ENST00000511377 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
CTNND2-214ENST00000511377 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.36
CTNND2-214ENST00000511377 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
CTNND2-214ENST00000511377 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
CTNND2-214ENST00000511377 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
CTNND2-214ENST00000511377 NACADO15069 1562 aa23.48■■□□□ 1.35
CTNND2-214ENST00000511377 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
CTNND2-214ENST00000511377 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
CTNND2-214ENST00000511377 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
CTNND2-214ENST00000511377 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
CTNND2-214ENST00000511377 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
CTNND2-214ENST00000511377 P3H3Q8IVL6 736 aa23.27■■□□□ 1.31
CTNND2-214ENST00000511377 FBLN2P98095 1184 aa23.16■■□□□ 1.3
CTNND2-214ENST00000511377 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
CTNND2-214ENST00000511377 DIEXFQ68CQ4 756 aaKnown RBP23.06■■□□□ 1.28
CTNND2-214ENST00000511377 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
CTNND2-214ENST00000511377 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
CTNND2-214ENST00000511377 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
CTNND2-214ENST00000511377 NEUROD1Q13562 356 aa22.99■■□□□ 1.27
CTNND2-214ENST00000511377 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
CTNND2-214ENST00000511377 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
CTNND2-214ENST00000511377 TRIM52Q96A61 297 aa22.95■■□□□ 1.26
CTNND2-214ENST00000511377 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
CTNND2-214ENST00000511377 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
CTNND2-214ENST00000511377 NEFLP07196 543 aa22.87■■□□□ 1.25
CTNND2-214ENST00000511377 CLIP1P30622 1438 aa22.79■■□□□ 1.24
CTNND2-214ENST00000511377 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
CTNND2-214ENST00000511377 EEA1Q15075 1411 aa22.74■■□□□ 1.23
CTNND2-214ENST00000511377 ZNF316A6NFI3 1004 aaPredicted RBP22.71■■□□□ 1.23
CTNND2-214ENST00000511377 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
CTNND2-214ENST00000511377 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
CTNND2-214ENST00000511377 SOGA1O94964 1423 aa22.66■■□□□ 1.22
CTNND2-214ENST00000511377 WIZO95785 1651 aa22.66■■□□□ 1.22
CTNND2-214ENST00000511377 ZNF777Q9ULD5 760 aaPredicted RBP22.65■■□□□ 1.22
CTNND2-214ENST00000511377 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
CTNND2-214ENST00000511377 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
CTNND2-214ENST00000511377 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
CTNND2-214ENST00000511377 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
CTNND2-214ENST00000511377 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
CTNND2-214ENST00000511377 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
CTNND2-214ENST00000511377 CHIC2Q9UKJ5 165 aa22.48■■□□□ 1.19
CTNND2-214ENST00000511377 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
CTNND2-214ENST00000511377 ERICH6Q7L0X2 663 aa22.45■■□□□ 1.18
CTNND2-214ENST00000511377 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.18
CTNND2-214ENST00000511377 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
CTNND2-214ENST00000511377 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
CTNND2-214ENST00000511377 ANP32CO43423 234 aa22.39■■□□□ 1.17
CTNND2-214ENST00000511377 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
CTNND2-214ENST00000511377 GTF3C3Q9Y5Q9 886 aa22.37■■□□□ 1.17
CTNND2-214ENST00000511377 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
CTNND2-214ENST00000511377 CUX2O14529 1486 aa22.34■■□□□ 1.17
CTNND2-214ENST00000511377 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
CTNND2-214ENST00000511377 TONSLQ96HA7 1378 aa22.31■■□□□ 1.16
CTNND2-214ENST00000511377 CARMIL1Q5VZK9 1371 aa22.28■■□□□ 1.16
CTNND2-214ENST00000511377 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
CTNND2-214ENST00000511377 DDX10Q13206 875 aaKnown RBP22.21■■□□□ 1.15
CTNND2-214ENST00000511377 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
CTNND2-214ENST00000511377 BCANQ96GW7 911 aa22.19■■□□□ 1.14
CTNND2-214ENST00000511377 HIRIP3Q9BW71 556 aaPredicted RBP22.16■■□□□ 1.14
CTNND2-214ENST00000511377 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
CTNND2-214ENST00000511377 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
CTNND2-214ENST00000511377 TSPY4P0CV99 314 aa22.13■■□□□ 1.13
CTNND2-214ENST00000511377 TSPY10P0CW01 314 aa22.13■■□□□ 1.13
CTNND2-214ENST00000511377 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
CTNND2-214ENST00000511377 VPS8Q8N3P4 1428 aa22.12■■□□□ 1.13
CTNND2-214ENST00000511377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.12■■□□□ 1.13
CTNND2-214ENST00000511377 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
CTNND2-214ENST00000511377 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
CTNND2-214ENST00000511377 NPM1P06748 294 aaKnown RBP eCLIP22.07■■□□□ 1.12
CTNND2-214ENST00000511377 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
CTNND2-214ENST00000511377 MIER1Q8N108 512 aa22.06■■□□□ 1.12
CTNND2-214ENST00000511377 KCNH8Q96L42 1107 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms