RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
PFDN1-203ENST00000510217 IGF1RP08069 1367 aa17.86■□□□□ 0.45
PFDN1-203ENST00000510217 PRG4Q92954 1404 aaPredicted RBP17.79■□□□□ 0.44
PFDN1-203ENST00000510217 KIAA0586Q9BVV6 1533 aa17.76■□□□□ 0.43
PFDN1-203ENST00000510217 CARMIL1Q5VZK9 1371 aa17.75■□□□□ 0.43
PFDN1-203ENST00000510217 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
PFDN1-203ENST00000510217 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
PFDN1-203ENST00000510217 IQGAP2Q13576 1575 aa17.67■□□□□ 0.42
PFDN1-203ENST00000510217 RAPGEF2Q9Y4G8 1499 aa17.64■□□□□ 0.41
PFDN1-203ENST00000510217 ADCY10Q96PN6 1610 aa17.64■□□□□ 0.41
PFDN1-203ENST00000510217 CTTNBP2Q8WZ74 1663 aa17.59■□□□□ 0.41
PFDN1-203ENST00000510217 KIF13AQ9H1H9 1805 aa17.58■□□□□ 0.4
PFDN1-203ENST00000510217 DISP1Q96F81 1524 aa17.56■□□□□ 0.4
PFDN1-203ENST00000510217 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
PFDN1-203ENST00000510217 MAPKBP1O60336 1514 aa17.55■□□□□ 0.4
PFDN1-203ENST00000510217 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
PFDN1-203ENST00000510217 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
PFDN1-203ENST00000510217 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
PFDN1-203ENST00000510217 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.39
PFDN1-203ENST00000510217 PTPRGP23470 1445 aa17.51■□□□□ 0.39
PFDN1-203ENST00000510217 DIP2BQ9P265 1576 aa17.49■□□□□ 0.39
PFDN1-203ENST00000510217 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
PFDN1-203ENST00000510217 ABCC2Q92887 1545 aa17.45■□□□□ 0.38
PFDN1-203ENST00000510217 UHRF1BP1LA0JNW5 1464 aa17.44■□□□□ 0.38
PFDN1-203ENST00000510217 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
PFDN1-203ENST00000510217 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
PFDN1-203ENST00000510217 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
PFDN1-203ENST00000510217 EEA1Q15075 1411 aa17.4■□□□□ 0.38
PFDN1-203ENST00000510217 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
PFDN1-203ENST00000510217 ZCCHC11Q5TAX3 1644 aaKnown RBP17.38■□□□□ 0.37
PFDN1-203ENST00000510217 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
PFDN1-203ENST00000510217 FAM69CQ0P6D2 419 aa17.36■□□□□ 0.37
PFDN1-203ENST00000510217 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
PFDN1-203ENST00000510217 ASXL2Q76L83 1435 aa17.35■□□□□ 0.37
PFDN1-203ENST00000510217 ABCA8O94911 1581 aa17.34■□□□□ 0.37
PFDN1-203ENST00000510217 SAMD9Q5K651 1589 aa17.33■□□□□ 0.37
PFDN1-203ENST00000510217 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
PFDN1-203ENST00000510217 KIF21BO75037 1637 aa17.32■□□□□ 0.36
PFDN1-203ENST00000510217 TSPOAP1O95153 1857 aa17.32■□□□□ 0.36
PFDN1-203ENST00000510217 GLI2P10070 1586 aa17.32■□□□□ 0.36
PFDN1-203ENST00000510217 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
PFDN1-203ENST00000510217 EPRSP07814 1512 aaKnown RBP17.26■□□□□ 0.35
PFDN1-203ENST00000510217 MAP3K4Q9Y6R4 1608 aa17.26■□□□□ 0.35
PFDN1-203ENST00000510217 KDM6BO15054 1643 aa17.25■□□□□ 0.35
PFDN1-203ENST00000510217 WDR7Q9Y4E6 1490 aa17.24■□□□□ 0.35
PFDN1-203ENST00000510217 FAM9AQ8IZU1 332 aaPredicted RBP17.24■□□□□ 0.35
PFDN1-203ENST00000510217 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
PFDN1-203ENST00000510217 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
PFDN1-203ENST00000510217 EFCAB5A4FU69 1503 aa17.17■□□□□ 0.34
PFDN1-203ENST00000510217 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
PFDN1-203ENST00000510217 CFAP43Q8NDM7 1665 aa17.16■□□□□ 0.34
PFDN1-203ENST00000510217 ATP10BO94823 1461 aa17.14■□□□□ 0.33
PFDN1-203ENST00000510217 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
PFDN1-203ENST00000510217 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
PFDN1-203ENST00000510217 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
PFDN1-203ENST00000510217 MAGI3Q5TCQ9 1506 aa17.08■□□□□ 0.32
PFDN1-203ENST00000510217 COL17A1Q9UMD9 1497 aaPredicted RBP17.08■□□□□ 0.32
PFDN1-203ENST00000510217 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
PFDN1-203ENST00000510217 ABCA9Q8IUA7 1624 aa17.07■□□□□ 0.32
PFDN1-203ENST00000510217 CD109Q6YHK3 1445 aa17.05■□□□□ 0.32
PFDN1-203ENST00000510217 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
PFDN1-203ENST00000510217 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
PFDN1-203ENST00000510217 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
PFDN1-203ENST00000510217 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
PFDN1-203ENST00000510217 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
PFDN1-203ENST00000510217 HECW1Q76N89 1606 aa16.99■□□□□ 0.31
PFDN1-203ENST00000510217 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
PFDN1-203ENST00000510217 FMN1Q68DA7 1419 aa16.96■□□□□ 0.31
PFDN1-203ENST00000510217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
PFDN1-203ENST00000510217 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
PFDN1-203ENST00000510217 ARAP3Q8WWN8 1544 aa16.94■□□□□ 0.3
PFDN1-203ENST00000510217 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
PFDN1-203ENST00000510217 LRRIQ1Q96JM4 1722 aa16.93■□□□□ 0.3
PFDN1-203ENST00000510217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.92■□□□□ 0.3
PFDN1-203ENST00000510217 NEO1Q92859 1461 aa16.91■□□□□ 0.3
PFDN1-203ENST00000510217 KDM4FA0A1W2PPD8 638 aa16.9■□□□□ 0.3
PFDN1-203ENST00000510217 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.3
PFDN1-203ENST00000510217 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.3
PFDN1-203ENST00000510217 ADGRL1O94910 1474 aa16.89■□□□□ 0.29
PFDN1-203ENST00000510217 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
PFDN1-203ENST00000510217 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
PFDN1-203ENST00000510217 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
PFDN1-203ENST00000510217 KIF14Q15058 1648 aa16.85■□□□□ 0.29
PFDN1-203ENST00000510217 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
PFDN1-203ENST00000510217 RICTORQ6R327 1708 aa16.83■□□□□ 0.28
PFDN1-203ENST00000510217 FANCAO15360 1455 aa16.82■□□□□ 0.28
PFDN1-203ENST00000510217 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
PFDN1-203ENST00000510217 CLIP1P30622 1438 aa16.81■□□□□ 0.28
PFDN1-203ENST00000510217 CASKIN1Q8WXD9 1431 aa16.81■□□□□ 0.28
PFDN1-203ENST00000510217 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
PFDN1-203ENST00000510217 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
PFDN1-203ENST00000510217 TROQ12816 1431 aaPredicted RBP16.79■□□□□ 0.28
PFDN1-203ENST00000510217 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
PFDN1-203ENST00000510217 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
PFDN1-203ENST00000510217 ARHGEF40Q8TER5 1519 aa16.78■□□□□ 0.28
PFDN1-203ENST00000510217 RAPGEF3O95398 923 aa16.77■□□□□ 0.28
PFDN1-203ENST00000510217 PLCH2O75038 1416 aa16.77■□□□□ 0.27
PFDN1-203ENST00000510217 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
PFDN1-203ENST00000510217 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
PFDN1-203ENST00000510217 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms