RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 RIMBP3BA6NNM3 1639 aa14.02□□□□□ -0.16
SEC24D-209ENST00000509818 RIMBP3Q9UFD9 1639 aa14.02□□□□□ -0.16
SEC24D-209ENST00000509818 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
SEC24D-209ENST00000509818 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
SEC24D-209ENST00000509818 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
SEC24D-209ENST00000509818 APLP2Q06481 763 aa13.99□□□□□ -0.17
SEC24D-209ENST00000509818 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
SEC24D-209ENST00000509818 PBRM1Q86U86 1689 aa13.99□□□□□ -0.17
SEC24D-209ENST00000509818 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
SEC24D-209ENST00000509818 MAGI1Q96QZ7 1491 aaPredicted RBP13.98□□□□□ -0.17
SEC24D-209ENST00000509818 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
SEC24D-209ENST00000509818 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
SEC24D-209ENST00000509818 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
SEC24D-209ENST00000509818 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
SEC24D-209ENST00000509818 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
SEC24D-209ENST00000509818 CTTNBP2Q8WZ74 1663 aa13.89□□□□□ -0.19
SEC24D-209ENST00000509818 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
SEC24D-209ENST00000509818 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
SEC24D-209ENST00000509818 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
SEC24D-209ENST00000509818 EFCAB5A4FU69 1503 aa13.85□□□□□ -0.19
SEC24D-209ENST00000509818 GRIN2AQ12879 1464 aa13.85□□□□□ -0.19
SEC24D-209ENST00000509818 ZEB1P37275 1124 aaPredicted RBP13.83□□□□□ -0.2
SEC24D-209ENST00000509818 CEP170Q5SW79 1584 aa13.82□□□□□ -0.2
SEC24D-209ENST00000509818 NUP160Q12769 1436 aa13.8□□□□□ -0.2
SEC24D-209ENST00000509818 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
SEC24D-209ENST00000509818 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
SEC24D-209ENST00000509818 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
SEC24D-209ENST00000509818 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
SEC24D-209ENST00000509818 FHOD3Q2V2M9 1422 aa13.77□□□□□ -0.21
SEC24D-209ENST00000509818 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
SEC24D-209ENST00000509818 FMN1Q68DA7 1419 aa13.75□□□□□ -0.21
SEC24D-209ENST00000509818 TIAM1Q13009 1591 aa13.74□□□□□ -0.21
SEC24D-209ENST00000509818 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
SEC24D-209ENST00000509818 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
SEC24D-209ENST00000509818 PCF11O94913 1555 aaKnown RBP13.72□□□□□ -0.21
SEC24D-209ENST00000509818 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
SEC24D-209ENST00000509818 SHROOM2Q13796 1616 aa13.71□□□□□ -0.21
SEC24D-209ENST00000509818 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
SEC24D-209ENST00000509818 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
SEC24D-209ENST00000509818 KIAA0586Q9BVV6 1533 aa13.68□□□□□ -0.22
SEC24D-209ENST00000509818 LRRC9Q6ZRR7 1453 aa13.68□□□□□ -0.22
SEC24D-209ENST00000509818 CFAP43Q8NDM7 1665 aa13.68□□□□□ -0.22
SEC24D-209ENST00000509818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
SEC24D-209ENST00000509818 CCER1Q8TC90 406 aaPredicted RBP13.67□□□□□ -0.22
SEC24D-209ENST00000509818 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
SEC24D-209ENST00000509818 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
SEC24D-209ENST00000509818 RRBP1Q9P2E9 1410 aaKnown RBP13.67□□□□□ -0.22
SEC24D-209ENST00000509818 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
SEC24D-209ENST00000509818 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
SEC24D-209ENST00000509818 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
SEC24D-209ENST00000509818 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
SEC24D-209ENST00000509818 CCDC18Q5T9S5 1454 aa13.57□□□□□ -0.24
SEC24D-209ENST00000509818 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
SEC24D-209ENST00000509818 KIAA0556O60303 1618 aa13.57□□□□□ -0.24
SEC24D-209ENST00000509818 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
SEC24D-209ENST00000509818 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
SEC24D-209ENST00000509818 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
SEC24D-209ENST00000509818 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
SEC24D-209ENST00000509818 CARMIL2Q6F5E8 1435 aa13.53□□□□□ -0.24
SEC24D-209ENST00000509818 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
SEC24D-209ENST00000509818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEC24D-209ENST00000509818 EPRSP07814 1512 aaKnown RBP13.51□□□□□ -0.25
SEC24D-209ENST00000509818 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
SEC24D-209ENST00000509818 FAM50AQ14320 339 aaKnown RBP13.49□□□□□ -0.25
SEC24D-209ENST00000509818 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
SEC24D-209ENST00000509818 ITGAEP38570 1179 aa13.48□□□□□ -0.25
SEC24D-209ENST00000509818 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
SEC24D-209ENST00000509818 RAPGEF6Q8TEU7 1601 aa13.47□□□□□ -0.25
SEC24D-209ENST00000509818 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.25
SEC24D-209ENST00000509818 MYOM3Q5VTT5 1437 aa13.45□□□□□ -0.26
SEC24D-209ENST00000509818 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
SEC24D-209ENST00000509818 MAGI3Q5TCQ9 1506 aa13.45□□□□□ -0.26
SEC24D-209ENST00000509818 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
SEC24D-209ENST00000509818 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
SEC24D-209ENST00000509818 PTPRGP23470 1445 aa13.44□□□□□ -0.26
SEC24D-209ENST00000509818 NUP153P49790 1475 aaKnown RBP13.44□□□□□ -0.26
SEC24D-209ENST00000509818 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
SEC24D-209ENST00000509818 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
SEC24D-209ENST00000509818 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
SEC24D-209ENST00000509818 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
SEC24D-209ENST00000509818 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
SEC24D-209ENST00000509818 PLB1Q6P1J6 1458 aa13.39□□□□□ -0.27
SEC24D-209ENST00000509818 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
SEC24D-209ENST00000509818 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
SEC24D-209ENST00000509818 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
SEC24D-209ENST00000509818 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
SEC24D-209ENST00000509818 ABCA8O94911 1581 aa13.37□□□□□ -0.27
SEC24D-209ENST00000509818 PTPN23Q9H3S7 1636 aa13.37□□□□□ -0.27
SEC24D-209ENST00000509818 TCOF1Q13428 1488 aaKnown RBP13.37□□□□□ -0.27
SEC24D-209ENST00000509818 DIP2BQ9P265 1576 aa13.36□□□□□ -0.27
SEC24D-209ENST00000509818 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
SEC24D-209ENST00000509818 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
SEC24D-209ENST00000509818 TROQ12816 1431 aaPredicted RBP13.35□□□□□ -0.27
SEC24D-209ENST00000509818 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
SEC24D-209ENST00000509818 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.28
SEC24D-209ENST00000509818 PLEKHD1A6NEE1 506 aa13.31□□□□□ -0.28
SEC24D-209ENST00000509818 ATP10BO94823 1461 aa13.31□□□□□ -0.28
SEC24D-209ENST00000509818 MYT1Q01538 1121 aa13.3□□□□□ -0.28
SEC24D-209ENST00000509818 PTPRKQ15262 1439 aa13.3□□□□□ -0.28
SEC24D-209ENST00000509818 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms