RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
SKP2-205ENST00000509692 JPH4Q96JJ6 628 aa27.49■■□□□ 1.99
SKP2-205ENST00000509692 KIAA0586Q9BVV6 1533 aa27.45■■□□□ 1.99
SKP2-205ENST00000509692 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
SKP2-205ENST00000509692 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
SKP2-205ENST00000509692 PRXQ9BXM0 1461 aa27.31■■□□□ 1.96
SKP2-205ENST00000509692 IQGAP2Q13576 1575 aa27.28■■□□□ 1.96
SKP2-205ENST00000509692 CSRNP3Q8WYN3 585 aa27.25■■□□□ 1.95
SKP2-205ENST00000509692 EEA1Q15075 1411 aa27.24■■□□□ 1.95
SKP2-205ENST00000509692 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
SKP2-205ENST00000509692 CTTNBP2Q8WZ74 1663 aa27.16■■□□□ 1.94
SKP2-205ENST00000509692 CARMIL2Q6F5E8 1435 aa27.14■■□□□ 1.94
SKP2-205ENST00000509692 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
SKP2-205ENST00000509692 UGGT2Q9NYU1 1516 aa27.14■■□□□ 1.93
SKP2-205ENST00000509692 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
SKP2-205ENST00000509692 TNIKQ9UKE5 1360 aa27.09■■□□□ 1.93
SKP2-205ENST00000509692 PTPRGP23470 1445 aa27.08■■□□□ 1.93
SKP2-205ENST00000509692 TTBK1Q5TCY1 1321 aaPredicted RBP27.07■■□□□ 1.92
SKP2-205ENST00000509692 ADCY10Q96PN6 1610 aa27.06■■□□□ 1.92
SKP2-205ENST00000509692 KIAA0556O60303 1618 aa27.03■■□□□ 1.92
SKP2-205ENST00000509692 KIF21BO75037 1637 aa26.96■■□□□ 1.91
SKP2-205ENST00000509692 NPM1P06748 294 aaKnown RBP eCLIP26.94■■□□□ 1.9
SKP2-205ENST00000509692 GOLGA3Q08378 1498 aa26.94■■□□□ 1.9
SKP2-205ENST00000509692 UACAQ9BZF9 1416 aa26.9■■□□□ 1.9
SKP2-205ENST00000509692 MAPKBP1O60336 1514 aa26.88■■□□□ 1.89
SKP2-205ENST00000509692 UHRF1BP1LA0JNW5 1464 aa26.88■■□□□ 1.89
SKP2-205ENST00000509692 ABCC2Q92887 1545 aa26.86■■□□□ 1.89
SKP2-205ENST00000509692 KIF13AQ9H1H9 1805 aa26.84■■□□□ 1.89
SKP2-205ENST00000509692 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
SKP2-205ENST00000509692 P3H3Q8IVL6 736 aa26.83■■□□□ 1.89
SKP2-205ENST00000509692 SAMD9Q5K651 1589 aa26.82■■□□□ 1.88
SKP2-205ENST00000509692 PLB1Q6P1J6 1458 aa26.81■■□□□ 1.88
SKP2-205ENST00000509692 RANGAP1P46060 587 aaPredicted RBP26.79■■□□□ 1.88
SKP2-205ENST00000509692 ABCC10Q5T3U5 1492 aa26.78■■□□□ 1.88
SKP2-205ENST00000509692 KDM5BQ9UGL1 1544 aa26.76■■□□□ 1.88
SKP2-205ENST00000509692 ABCA8O94911 1581 aa26.75■■□□□ 1.87
SKP2-205ENST00000509692 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
SKP2-205ENST00000509692 FAM69CQ0P6D2 419 aa26.75■■□□□ 1.87
SKP2-205ENST00000509692 DIP2BQ9P265 1576 aa26.75■■□□□ 1.87
SKP2-205ENST00000509692 ASXL2Q76L83 1435 aa26.72■■□□□ 1.87
SKP2-205ENST00000509692 ZCCHC11Q5TAX3 1644 aaKnown RBP26.72■■□□□ 1.87
SKP2-205ENST00000509692 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
SKP2-205ENST00000509692 EFCAB5A4FU69 1503 aa26.64■■□□□ 1.86
SKP2-205ENST00000509692 RAPGEF6Q8TEU7 1601 aa26.58■■□□□ 1.85
SKP2-205ENST00000509692 ARID3CA6NKF2 412 aa26.57■■□□□ 1.84
SKP2-205ENST00000509692 TSPOAP1O95153 1857 aa26.56■■□□□ 1.84
SKP2-205ENST00000509692 EPRSP07814 1512 aaKnown RBP26.56■■□□□ 1.84
SKP2-205ENST00000509692 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
SKP2-205ENST00000509692 GLI2P10070 1586 aa26.56■■□□□ 1.84
SKP2-205ENST00000509692 ATP10BO94823 1461 aa26.55■■□□□ 1.84
SKP2-205ENST00000509692 WDR7Q9Y4E6 1490 aa26.55■■□□□ 1.84
SKP2-205ENST00000509692 ARHGAP35Q9NRY4 1499 aa26.54■■□□□ 1.84
SKP2-205ENST00000509692 NUP153P49790 1475 aaKnown RBP26.51■■□□□ 1.83
SKP2-205ENST00000509692 PPRC1Q5VV67 1664 aaKnown RBP26.46■■□□□ 1.83
SKP2-205ENST00000509692 KCNH8Q96L42 1107 aa26.45■■□□□ 1.82
SKP2-205ENST00000509692 MAP3K4Q9Y6R4 1608 aa26.45■■□□□ 1.82
SKP2-205ENST00000509692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.4■■□□□ 1.82
SKP2-205ENST00000509692 HNRNPUL2Q1KMD3 747 aaKnown RBP26.4■■□□□ 1.82
SKP2-205ENST00000509692 FMN1Q68DA7 1419 aa26.4■■□□□ 1.82
SKP2-205ENST00000509692 CFAP43Q8NDM7 1665 aa26.34■■□□□ 1.81
SKP2-205ENST00000509692 KDM6BO15054 1643 aa26.34■■□□□ 1.81
SKP2-205ENST00000509692 CLIP1P30622 1438 aa26.33■■□□□ 1.81
SKP2-205ENST00000509692 CD109Q6YHK3 1445 aa26.33■■□□□ 1.8
SKP2-205ENST00000509692 CEP162Q5TB80 1403 aa26.32■■□□□ 1.8
SKP2-205ENST00000509692 CDK13Q14004 1512 aaKnown RBP26.31■■□□□ 1.8
SKP2-205ENST00000509692 ATP1B4Q9UN42 357 aaPredicted RBP26.3■■□□□ 1.8
SKP2-205ENST00000509692 TEX14Q8IWB6 1497 aa26.29■■□□□ 1.8
SKP2-205ENST00000509692 HECW1Q76N89 1606 aa26.29■■□□□ 1.8
SKP2-205ENST00000509692 PLEKHD1A6NEE1 506 aa26.28■■□□□ 1.8
SKP2-205ENST00000509692 MAGI3Q5TCQ9 1506 aa26.27■■□□□ 1.8
SKP2-205ENST00000509692 ABCA9Q8IUA7 1624 aa26.26■■□□□ 1.79
SKP2-205ENST00000509692 COL17A1Q9UMD9 1497 aaPredicted RBP26.24■■□□□ 1.79
SKP2-205ENST00000509692 LRRIQ1Q96JM4 1722 aa26.22■■□□□ 1.79
SKP2-205ENST00000509692 PCF11O94913 1555 aaKnown RBP26.21■■□□□ 1.79
SKP2-205ENST00000509692 CASKIN1Q8WXD9 1431 aa26.2■■□□□ 1.78
SKP2-205ENST00000509692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.14■■□□□ 1.78
SKP2-205ENST00000509692 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
SKP2-205ENST00000509692 FYCO1Q9BQS8 1478 aa26.11■■□□□ 1.77
SKP2-205ENST00000509692 TTC37Q6PGP7 1564 aa26.11■■□□□ 1.77
SKP2-205ENST00000509692 CCDC18Q5T9S5 1454 aa26.08■■□□□ 1.77
SKP2-205ENST00000509692 TROQ12816 1431 aaPredicted RBP26.07■■□□□ 1.76
SKP2-205ENST00000509692 ARAP3Q8WWN8 1544 aa26.05■■□□□ 1.76
SKP2-205ENST00000509692 KIF14Q15058 1648 aa26.05■■□□□ 1.76
SKP2-205ENST00000509692 NEO1Q92859 1461 aa26.04■■□□□ 1.76
SKP2-205ENST00000509692 PHLDB1Q86UU1 1377 aa26.02■■□□□ 1.76
SKP2-205ENST00000509692 FANCAO15360 1455 aa25.98■■□□□ 1.75
SKP2-205ENST00000509692 PLCH2O75038 1416 aa25.97■■□□□ 1.75
SKP2-205ENST00000509692 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
SKP2-205ENST00000509692 AKNAQ7Z591 1439 aa25.95■■□□□ 1.75
SKP2-205ENST00000509692 RAPGEF3O95398 923 aa25.95■■□□□ 1.74
SKP2-205ENST00000509692 MYO5CQ9NQX4 1742 aa25.95■■□□□ 1.74
SKP2-205ENST00000509692 CFAP74Q9C0B2 1584 aa25.93■■□□□ 1.74
SKP2-205ENST00000509692 FRMPD1Q5SYB0 1578 aa25.9■■□□□ 1.74
SKP2-205ENST00000509692 DENND4BO75064 1496 aaPredicted RBP25.87■■□□□ 1.73
SKP2-205ENST00000509692 EFCAB2Q5VUJ9 269 aa25.86■■□□□ 1.73
SKP2-205ENST00000509692 RICTORQ6R327 1708 aa25.86■■□□□ 1.73
SKP2-205ENST00000509692 CDC42BPBQ9Y5S2 1711 aa25.85■■□□□ 1.73
SKP2-205ENST00000509692 KDM4FA0A1W2PPD8 638 aa25.85■■□□□ 1.73
SKP2-205ENST00000509692 ADGRL1O94910 1474 aa25.84■■□□□ 1.73
SKP2-205ENST00000509692 ARHGAP5Q13017 1502 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms