RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CARMIL1Q5VZK9 1371 aa14.78□□□□□ -0.04
PDLIM5-213ENST00000509357 PRG4Q92954 1404 aaPredicted RBP14.77□□□□□ -0.04
PDLIM5-213ENST00000509357 ERCC6L2Q5T890 1561 aa14.75□□□□□ -0.05
PDLIM5-213ENST00000509357 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.06
PDLIM5-213ENST00000509357 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
PDLIM5-213ENST00000509357 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
PDLIM5-213ENST00000509357 TTBK1Q5TCY1 1321 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-213ENST00000509357 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
PDLIM5-213ENST00000509357 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
PDLIM5-213ENST00000509357 FAM9AQ8IZU1 332 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-213ENST00000509357 CARMIL2Q6F5E8 1435 aa14.62□□□□□ -0.07
PDLIM5-213ENST00000509357 EEA1Q15075 1411 aa14.61□□□□□ -0.07
PDLIM5-213ENST00000509357 KIF21BO75037 1637 aa14.6□□□□□ -0.07
PDLIM5-213ENST00000509357 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
PDLIM5-213ENST00000509357 CTTNBP2Q8WZ74 1663 aa14.6□□□□□ -0.07
PDLIM5-213ENST00000509357 PTPRGP23470 1445 aa14.59□□□□□ -0.07
PDLIM5-213ENST00000509357 IQGAP2Q13576 1575 aa14.58□□□□□ -0.08
PDLIM5-213ENST00000509357 TNIKQ9UKE5 1360 aa14.57□□□□□ -0.08
PDLIM5-213ENST00000509357 FAM69CQ0P6D2 419 aa14.51□□□□□ -0.09
PDLIM5-213ENST00000509357 DISP1Q96F81 1524 aa14.49□□□□□ -0.09
PDLIM5-213ENST00000509357 UGGT2Q9NYU1 1516 aa14.48□□□□□ -0.09
PDLIM5-213ENST00000509357 ADCY10Q96PN6 1610 aa14.48□□□□□ -0.09
PDLIM5-213ENST00000509357 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
PDLIM5-213ENST00000509357 UACAQ9BZF9 1416 aa14.46□□□□□ -0.09
PDLIM5-213ENST00000509357 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
PDLIM5-213ENST00000509357 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
PDLIM5-213ENST00000509357 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
PDLIM5-213ENST00000509357 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
PDLIM5-213ENST00000509357 MAPKBP1O60336 1514 aa14.43□□□□□ -0.1
PDLIM5-213ENST00000509357 ABCC10Q5T3U5 1492 aa14.43□□□□□ -0.1
PDLIM5-213ENST00000509357 SAMD9Q5K651 1589 aa14.43□□□□□ -0.1
PDLIM5-213ENST00000509357 ABCC2Q92887 1545 aa14.42□□□□□ -0.1
PDLIM5-213ENST00000509357 UHRF1BP1LA0JNW5 1464 aa14.39□□□□□ -0.11
PDLIM5-213ENST00000509357 ASXL2Q76L83 1435 aa14.38□□□□□ -0.11
PDLIM5-213ENST00000509357 PLB1Q6P1J6 1458 aa14.37□□□□□ -0.11
PDLIM5-213ENST00000509357 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-213ENST00000509357 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
PDLIM5-213ENST00000509357 ARID3CA6NKF2 412 aa14.35□□□□□ -0.11
PDLIM5-213ENST00000509357 KIF13AQ9H1H9 1805 aa14.35□□□□□ -0.11
PDLIM5-213ENST00000509357 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
PDLIM5-213ENST00000509357 KDM5BQ9UGL1 1544 aa14.33□□□□□ -0.12
PDLIM5-213ENST00000509357 ARHGAP35Q9NRY4 1499 aa14.32□□□□□ -0.12
PDLIM5-213ENST00000509357 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
PDLIM5-213ENST00000509357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-213ENST00000509357 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-213ENST00000509357 FHOD3Q2V2M9 1422 aa14.31□□□□□ -0.12
PDLIM5-213ENST00000509357 ABCA8O94911 1581 aa14.29□□□□□ -0.12
PDLIM5-213ENST00000509357 EFCAB5A4FU69 1503 aa14.28□□□□□ -0.12
PDLIM5-213ENST00000509357 ZCCHC11Q5TAX3 1644 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-213ENST00000509357 EPRSP07814 1512 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-213ENST00000509357 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
PDLIM5-213ENST00000509357 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
PDLIM5-213ENST00000509357 WDR7Q9Y4E6 1490 aa14.25□□□□□ -0.13
PDLIM5-213ENST00000509357 LRRIQ1Q96JM4 1722 aa14.24□□□□□ -0.13
PDLIM5-213ENST00000509357 GLI2P10070 1586 aa14.24□□□□□ -0.13
PDLIM5-213ENST00000509357 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-213ENST00000509357 KDM6BO15054 1643 aa14.21□□□□□ -0.13
PDLIM5-213ENST00000509357 RAPGEF6Q8TEU7 1601 aa14.21□□□□□ -0.13
PDLIM5-213ENST00000509357 ATP10BO94823 1461 aa14.2□□□□□ -0.14
PDLIM5-213ENST00000509357 CEP162Q5TB80 1403 aa14.2□□□□□ -0.14
PDLIM5-213ENST00000509357 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
PDLIM5-213ENST00000509357 CLIP1P30622 1438 aa14.19□□□□□ -0.14
PDLIM5-213ENST00000509357 CD109Q6YHK3 1445 aa14.19□□□□□ -0.14
PDLIM5-213ENST00000509357 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-213ENST00000509357 PCF11O94913 1555 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-213ENST00000509357 PLEKHD1A6NEE1 506 aa14.17□□□□□ -0.14
PDLIM5-213ENST00000509357 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.14
PDLIM5-213ENST00000509357 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-213ENST00000509357 PPRC1Q5VV67 1664 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-213ENST00000509357 FMN1Q68DA7 1419 aa14.12□□□□□ -0.15
PDLIM5-213ENST00000509357 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
PDLIM5-213ENST00000509357 CFAP43Q8NDM7 1665 aa14.09□□□□□ -0.15
PDLIM5-213ENST00000509357 COL17A1Q9UMD9 1497 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-213ENST00000509357 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-213ENST00000509357 HECW1Q76N89 1606 aa14.08□□□□□ -0.16
PDLIM5-213ENST00000509357 CASKIN1Q8WXD9 1431 aa14.07□□□□□ -0.16
PDLIM5-213ENST00000509357 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
PDLIM5-213ENST00000509357 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
PDLIM5-213ENST00000509357 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
PDLIM5-213ENST00000509357 KDM4FA0A1W2PPD8 638 aa14.01□□□□□ -0.17
PDLIM5-213ENST00000509357 RAPGEF3O95398 923 aa14.01□□□□□ -0.17
PDLIM5-213ENST00000509357 VPS8Q8N3P4 1428 aa14□□□□□ -0.17
PDLIM5-213ENST00000509357 KIF14Q15058 1648 aa14□□□□□ -0.17
PDLIM5-213ENST00000509357 NEO1Q92859 1461 aa13.99□□□□□ -0.17
PDLIM5-213ENST00000509357 ARAP3Q8WWN8 1544 aa13.98□□□□□ -0.17
PDLIM5-213ENST00000509357 TTC37Q6PGP7 1564 aa13.97□□□□□ -0.17
PDLIM5-213ENST00000509357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDLIM5-213ENST00000509357 FANCAO15360 1455 aa13.96□□□□□ -0.17
PDLIM5-213ENST00000509357 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
PDLIM5-213ENST00000509357 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
PDLIM5-213ENST00000509357 CCDC18Q5T9S5 1454 aa13.94□□□□□ -0.18
PDLIM5-213ENST00000509357 TROQ12816 1431 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-213ENST00000509357 ADGRL1O94910 1474 aa13.93□□□□□ -0.18
PDLIM5-213ENST00000509357 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
PDLIM5-213ENST00000509357 DENND4BO75064 1496 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-213ENST00000509357 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-213ENST00000509357 PLCH2O75038 1416 aa13.92□□□□□ -0.18
PDLIM5-213ENST00000509357 CFAP74Q9C0B2 1584 aa13.89□□□□□ -0.19
PDLIM5-213ENST00000509357 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
PDLIM5-213ENST00000509357 SCAPERQ9BY12 1400 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms