RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 KIAA0586Q9BVV6 1533 aa28.62■■■□□ 2.17
CLDND1-219ENST00000508659 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
CLDND1-219ENST00000508659 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
CLDND1-219ENST00000508659 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
CLDND1-219ENST00000508659 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
CLDND1-219ENST00000508659 PRXQ9BXM0 1461 aa28.46■■■□□ 2.15
CLDND1-219ENST00000508659 EEA1Q15075 1411 aa28.46■■■□□ 2.15
CLDND1-219ENST00000508659 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
CLDND1-219ENST00000508659 CSRNP3Q8WYN3 585 aa28.36■■■□□ 2.13
CLDND1-219ENST00000508659 CARMIL2Q6F5E8 1435 aa28.35■■■□□ 2.13
CLDND1-219ENST00000508659 CTTNBP2Q8WZ74 1663 aa28.34■■■□□ 2.13
CLDND1-219ENST00000508659 UGGT2Q9NYU1 1516 aa28.3■■■□□ 2.12
CLDND1-219ENST00000508659 FAM9AQ8IZU1 332 aaPredicted RBP28.27■■■□□ 2.12
CLDND1-219ENST00000508659 DISP1Q96F81 1524 aa28.25■■■□□ 2.11
CLDND1-219ENST00000508659 TNIKQ9UKE5 1360 aa28.24■■■□□ 2.11
CLDND1-219ENST00000508659 KIAA0556O60303 1618 aa28.22■■■□□ 2.11
CLDND1-219ENST00000508659 TRHP20396 242 aaPredicted RBP28.22■■■□□ 2.11
CLDND1-219ENST00000508659 PTPRGP23470 1445 aa28.21■■■□□ 2.11
CLDND1-219ENST00000508659 KIF21BO75037 1637 aa28.18■■■□□ 2.1
CLDND1-219ENST00000508659 ADCY10Q96PN6 1610 aa28.17■■■□□ 2.1
CLDND1-219ENST00000508659 TTBK1Q5TCY1 1321 aaPredicted RBP28.17■■■□□ 2.1
CLDND1-219ENST00000508659 GOLGA3Q08378 1498 aa28.15■■■□□ 2.1
CLDND1-219ENST00000508659 NPM1P06748 294 aaKnown RBP eCLIP28.08■■■□□ 2.09
CLDND1-219ENST00000508659 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
CLDND1-219ENST00000508659 MAPKBP1O60336 1514 aa28.03■■■□□ 2.08
CLDND1-219ENST00000508659 ABCC2Q92887 1545 aa28.02■■■□□ 2.08
CLDND1-219ENST00000508659 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
CLDND1-219ENST00000508659 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
CLDND1-219ENST00000508659 PLB1Q6P1J6 1458 aa27.92■■■□□ 2.06
CLDND1-219ENST00000508659 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
CLDND1-219ENST00000508659 ABCC10Q5T3U5 1492 aa27.89■■■□□ 2.06
CLDND1-219ENST00000508659 UBTFP17480 764 aaKnown RBP27.89■■■□□ 2.06
CLDND1-219ENST00000508659 RANGAP1P46060 587 aaPredicted RBP27.89■■■□□ 2.06
CLDND1-219ENST00000508659 KDM5BQ9UGL1 1544 aa27.88■■■□□ 2.05
CLDND1-219ENST00000508659 ABCA8O94911 1581 aa27.88■■■□□ 2.05
CLDND1-219ENST00000508659 P3H3Q8IVL6 736 aa27.88■■■□□ 2.05
CLDND1-219ENST00000508659 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
CLDND1-219ENST00000508659 DIP2BQ9P265 1576 aa27.87■■■□□ 2.05
CLDND1-219ENST00000508659 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
CLDND1-219ENST00000508659 ZCCHC11Q5TAX3 1644 aaKnown RBP27.84■■■□□ 2.05
CLDND1-219ENST00000508659 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
CLDND1-219ENST00000508659 FHOD3Q2V2M9 1422 aa27.82■■■□□ 2.04
CLDND1-219ENST00000508659 FAM69CQ0P6D2 419 aa27.8■■■□□ 2.04
CLDND1-219ENST00000508659 RAPGEF6Q8TEU7 1601 aa27.73■■■□□ 2.03
CLDND1-219ENST00000508659 WDR7Q9Y4E6 1490 aa27.71■■■□□ 2.03
CLDND1-219ENST00000508659 EPRSP07814 1512 aaKnown RBP27.67■■■□□ 2.02
CLDND1-219ENST00000508659 ARHGAP35Q9NRY4 1499 aa27.67■■■□□ 2.02
CLDND1-219ENST00000508659 GLI2P10070 1586 aa27.67■■■□□ 2.02
CLDND1-219ENST00000508659 ARID3CA6NKF2 412 aa27.64■■■□□ 2.02
CLDND1-219ENST00000508659 NUP153P49790 1475 aaKnown RBP27.63■■■□□ 2.01
CLDND1-219ENST00000508659 ATP10BO94823 1461 aa27.61■■■□□ 2.01
CLDND1-219ENST00000508659 FMN1Q68DA7 1419 aa27.59■■■□□ 2.01
CLDND1-219ENST00000508659 TSPOAP1O95153 1857 aa27.55■■■□□ 2
CLDND1-219ENST00000508659 MAP3K4Q9Y6R4 1608 aa27.55■■■□□ 2
CLDND1-219ENST00000508659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.53■■■□□ 2
CLDND1-219ENST00000508659 HNRNPUL2Q1KMD3 747 aaKnown RBP27.53■■■□□ 2
CLDND1-219ENST00000508659 HECW1Q76N89 1606 aa27.52■■■□□ 2
CLDND1-219ENST00000508659 PPRC1Q5VV67 1664 aaKnown RBP27.49■■□□□ 1.99
CLDND1-219ENST00000508659 CLIP1P30622 1438 aa27.49■■□□□ 1.99
CLDND1-219ENST00000508659 KCNH8Q96L42 1107 aa27.48■■□□□ 1.99
CLDND1-219ENST00000508659 TEX14Q8IWB6 1497 aa27.47■■□□□ 1.99
CLDND1-219ENST00000508659 CFAP43Q8NDM7 1665 aa27.46■■□□□ 1.99
CLDND1-219ENST00000508659 KDM6BO15054 1643 aa27.46■■□□□ 1.99
CLDND1-219ENST00000508659 CDK13Q14004 1512 aaKnown RBP27.44■■□□□ 1.98
CLDND1-219ENST00000508659 CD109Q6YHK3 1445 aa27.41■■□□□ 1.98
CLDND1-219ENST00000508659 ATP1B4Q9UN42 357 aaPredicted RBP27.41■■□□□ 1.98
CLDND1-219ENST00000508659 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.98
CLDND1-219ENST00000508659 MAGI3Q5TCQ9 1506 aa27.38■■□□□ 1.97
CLDND1-219ENST00000508659 ABCA9Q8IUA7 1624 aa27.38■■□□□ 1.97
CLDND1-219ENST00000508659 PLEKHD1A6NEE1 506 aa27.37■■□□□ 1.97
CLDND1-219ENST00000508659 CEP162Q5TB80 1403 aa27.35■■□□□ 1.97
CLDND1-219ENST00000508659 CASKIN1Q8WXD9 1431 aa27.34■■□□□ 1.97
CLDND1-219ENST00000508659 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
CLDND1-219ENST00000508659 CCDC18Q5T9S5 1454 aa27.3■■□□□ 1.96
CLDND1-219ENST00000508659 CDK11AQ9UQ88 783 aaPredicted RBP27.27■■□□□ 1.96
CLDND1-219ENST00000508659 LRRIQ1Q96JM4 1722 aa27.24■■□□□ 1.95
CLDND1-219ENST00000508659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.24■■□□□ 1.95
CLDND1-219ENST00000508659 TTC37Q6PGP7 1564 aa27.23■■□□□ 1.95
CLDND1-219ENST00000508659 COL17A1Q9UMD9 1497 aaPredicted RBP27.22■■□□□ 1.95
CLDND1-219ENST00000508659 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
CLDND1-219ENST00000508659 KIF14Q15058 1648 aa27.2■■□□□ 1.95
CLDND1-219ENST00000508659 TROQ12816 1431 aaPredicted RBP27.2■■□□□ 1.94
CLDND1-219ENST00000508659 NEO1Q92859 1461 aa27.18■■□□□ 1.94
CLDND1-219ENST00000508659 PHLDB1Q86UU1 1377 aa27.15■■□□□ 1.94
CLDND1-219ENST00000508659 CFAP74Q9C0B2 1584 aa27.14■■□□□ 1.93
CLDND1-219ENST00000508659 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
CLDND1-219ENST00000508659 FANCAO15360 1455 aa27.12■■□□□ 1.93
CLDND1-219ENST00000508659 MYO5CQ9NQX4 1742 aa27.06■■□□□ 1.92
CLDND1-219ENST00000508659 PLCH2O75038 1416 aa27.06■■□□□ 1.92
CLDND1-219ENST00000508659 AKNAQ7Z591 1439 aa27.03■■□□□ 1.92
CLDND1-219ENST00000508659 VPS8Q8N3P4 1428 aa27.03■■□□□ 1.92
CLDND1-219ENST00000508659 ARHGAP5Q13017 1502 aa27■■□□□ 1.91
CLDND1-219ENST00000508659 FRMPD1Q5SYB0 1578 aa26.99■■□□□ 1.91
CLDND1-219ENST00000508659 DENND4BO75064 1496 aaPredicted RBP26.98■■□□□ 1.91
CLDND1-219ENST00000508659 ADGRL1O94910 1474 aa26.98■■□□□ 1.91
CLDND1-219ENST00000508659 MTUS2Q5JR59 1369 aa26.97■■□□□ 1.91
CLDND1-219ENST00000508659 EHBP1L1Q8N3D4 1523 aa26.96■■□□□ 1.91
CLDND1-219ENST00000508659 PREX2Q70Z35 1606 aa26.95■■□□□ 1.91
CLDND1-219ENST00000508659 RAPGEF3O95398 923 aa26.95■■□□□ 1.9
CLDND1-219ENST00000508659 EFCAB2Q5VUJ9 269 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms