RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	CARMIL1	Q5VZK9	1371 aa		23.69	■■□□□ 1.38
CDHR2-204	ENST00000508085	KIAA0586	Q9BVV6	1533 aa		23.69	■■□□□ 1.38
CDHR2-204	ENST00000508085	JPH4	Q96JJ6	628 aa		23.67	■■□□□ 1.38
CDHR2-204	ENST00000508085	TRH	P20396	242 aa	Predicted RBP	23.58	■■□□□ 1.37
CDHR2-204	ENST00000508085	IQGAP2	Q13576	1575 aa		23.57	■■□□□ 1.36
CDHR2-204	ENST00000508085	RAPGEF2	Q9Y4G8	1499 aa		23.56	■■□□□ 1.36
CDHR2-204	ENST00000508085	CTTNBP2	Q8WZ74	1663 aa		23.51	■■□□□ 1.35
CDHR2-204	ENST00000508085	ADCY10	Q96PN6	1610 aa		23.51	■■□□□ 1.35
CDHR2-204	ENST00000508085	KIF13A	Q9H1H9	1805 aa		23.47	■■□□□ 1.35
CDHR2-204	ENST00000508085	PRX	Q9BXM0	1461 aa		23.43	■■□□□ 1.34
CDHR2-204	ENST00000508085	DISP1	Q96F81	1524 aa		23.42	■■□□□ 1.34
CDHR2-204	ENST00000508085	UGGT2	Q9NYU1	1516 aa		23.42	■■□□□ 1.34
CDHR2-204	ENST00000508085	CARMIL2	Q6F5E8	1435 aa		23.39	■■□□□ 1.33
CDHR2-204	ENST00000508085	KIAA0556	O60303	1618 aa		23.37	■■□□□ 1.33
CDHR2-204	ENST00000508085	MAPKBP1	O60336	1514 aa		23.36	■■□□□ 1.33
CDHR2-204	ENST00000508085	TNIK	Q9UKE5	1360 aa		23.36	■■□□□ 1.33
CDHR2-204	ENST00000508085	PTPRG	P23470	1445 aa		23.35	■■□□□ 1.33
CDHR2-204	ENST00000508085	DIP2B	Q9P265	1576 aa		23.28	■■□□□ 1.32
CDHR2-204	ENST00000508085	TTBK1	Q5TCY1	1321 aa	Predicted RBP	23.28	■■□□□ 1.32
CDHR2-204	ENST00000508085	ABCC10	Q5T3U5	1492 aa		23.26	■■□□□ 1.31
CDHR2-204	ENST00000508085	EEA1	Q15075	1411 aa		23.25	■■□□□ 1.31
CDHR2-204	ENST00000508085	UHRF1BP1L	A0JNW5	1464 aa		23.24	■■□□□ 1.31
CDHR2-204	ENST00000508085	ABCC2	Q92887	1545 aa		23.24	■■□□□ 1.31
CDHR2-204	ENST00000508085	NPM1	P06748	294 aa	Known RBP eCLIP	23.24	■■□□□ 1.31
CDHR2-204	ENST00000508085	CSRNP3	Q8WYN3	585 aa		23.23	■■□□□ 1.31
CDHR2-204	ENST00000508085	UACA	Q9BZF9	1416 aa		23.22	■■□□□ 1.31
CDHR2-204	ENST00000508085	GOLGA3	Q08378	1498 aa		23.19	■■□□□ 1.3
CDHR2-204	ENST00000508085	ZCCHC11	Q5TAX3	1644 aa	Known RBP	23.18	■■□□□ 1.3
CDHR2-204	ENST00000508085	TSPOAP1	O95153	1857 aa		23.16	■■□□□ 1.3
CDHR2-204	ENST00000508085	KDM5B	Q9UGL1	1544 aa		23.15	■■□□□ 1.3
CDHR2-204	ENST00000508085	CHIC1	Q5VXU3	224 aa		23.15	■■□□□ 1.3
CDHR2-204	ENST00000508085	KIF21B	O75037	1637 aa		23.15	■■□□□ 1.3
CDHR2-204	ENST00000508085	FAM69C	Q0P6D2	419 aa		23.14	■■□□□ 1.29
CDHR2-204	ENST00000508085	SAMD9	Q5K651	1589 aa		23.14	■■□□□ 1.29
CDHR2-204	ENST00000508085	ABCA8	O94911	1581 aa		23.13	■■□□□ 1.29
CDHR2-204	ENST00000508085	PLB1	Q6P1J6	1458 aa		23.11	■■□□□ 1.29
CDHR2-204	ENST00000508085	ASXL2	Q76L83	1435 aa		23.11	■■□□□ 1.29
CDHR2-204	ENST00000508085	FAM9A	Q8IZU1	332 aa	Predicted RBP	23.1	■■□□□ 1.29
CDHR2-204	ENST00000508085	PPRC1	Q5VV67	1664 aa	Known RBP	23.07	■■□□□ 1.28
CDHR2-204	ENST00000508085	GLI2	P10070	1586 aa		23.07	■■□□□ 1.28
CDHR2-204	ENST00000508085	MAP3K4	Q9Y6R4	1608 aa		23	■■□□□ 1.27
CDHR2-204	ENST00000508085	EPRS	P07814	1512 aa	Known RBP	23	■■□□□ 1.27
CDHR2-204	ENST00000508085	P3H3	Q8IVL6	736 aa		22.98	■■□□□ 1.27
CDHR2-204	ENST00000508085	KDM6B	O15054	1643 aa		22.97	■■□□□ 1.27
CDHR2-204	ENST00000508085	WDR7	Q9Y4E6	1490 aa		22.96	■■□□□ 1.27
CDHR2-204	ENST00000508085	RAPGEF6	Q8TEU7	1601 aa		22.96	■■□□□ 1.27
CDHR2-204	ENST00000508085	EFCAB5	A4FU69	1503 aa		22.91	■■□□□ 1.26
CDHR2-204	ENST00000508085	FHOD3	Q2V2M9	1422 aa		22.91	■■□□□ 1.26
CDHR2-204	ENST00000508085	CFAP43	Q8NDM7	1665 aa		22.88	■■□□□ 1.25
CDHR2-204	ENST00000508085	ATP10B	O94823	1461 aa		22.88	■■□□□ 1.25
CDHR2-204	ENST00000508085	RANGAP1	P46060	587 aa	Predicted RBP	22.88	■■□□□ 1.25
CDHR2-204	ENST00000508085	EHMT2	Q96KQ7	1210 aa		22.83	■■□□□ 1.25
CDHR2-204	ENST00000508085	NUP153	P49790	1475 aa	Known RBP	22.83	■■□□□ 1.25
CDHR2-204	ENST00000508085	ARID3C	A6NKF2	412 aa		22.82	■■□□□ 1.24
CDHR2-204	ENST00000508085	TEX14	Q8IWB6	1497 aa		22.79	■■□□□ 1.24
CDHR2-204	ENST00000508085	UBTF	P17480	764 aa	Known RBP	22.77	■■□□□ 1.24
CDHR2-204	ENST00000508085	ABCA9	Q8IUA7	1624 aa		22.76	■■□□□ 1.23
CDHR2-204	ENST00000508085	ARHGAP35	Q9NRY4	1499 aa		22.76	■■□□□ 1.23
CDHR2-204	ENST00000508085	COL17A1	Q9UMD9	1497 aa	Predicted RBP	22.76	■■□□□ 1.23
CDHR2-204	ENST00000508085	KCNH8	Q96L42	1107 aa		22.75	■■□□□ 1.23
CDHR2-204	ENST00000508085	MAGI3	Q5TCQ9	1506 aa		22.75	■■□□□ 1.23
CDHR2-204	ENST00000508085	CD109	Q6YHK3	1445 aa		22.74	■■□□□ 1.23
CDHR2-204	ENST00000508085	LRRIQ1	Q96JM4	1722 aa		22.68	■■□□□ 1.22
CDHR2-204	ENST00000508085	CDK13	Q14004	1512 aa	Known RBP	22.67	■■□□□ 1.22
CDHR2-204	ENST00000508085	HECW1	Q76N89	1606 aa		22.65	■■□□□ 1.22
CDHR2-204	ENST00000508085	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	22.63	■■□□□ 1.21
CDHR2-204	ENST00000508085	HNRNPUL2	Q1KMD3	747 aa	Known RBP	22.63	■■□□□ 1.21
CDHR2-204	ENST00000508085	FMN1	Q68DA7	1419 aa		22.63	■■□□□ 1.21
CDHR2-204	ENST00000508085	TTC37	Q6PGP7	1564 aa		22.59	■■□□□ 1.21
CDHR2-204	ENST00000508085	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.58	■■□□□ 1.21
CDHR2-204	ENST00000508085	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	22.57	■■□□□ 1.2
CDHR2-204	ENST00000508085	ARAP3	Q8WWN8	1544 aa		22.57	■■□□□ 1.2
CDHR2-204	ENST00000508085	PCF11	O94913	1555 aa	Known RBP	22.55	■■□□□ 1.2
CDHR2-204	ENST00000508085	PLEKHD1	A6NEE1	506 aa		22.53	■■□□□ 1.2
CDHR2-204	ENST00000508085	NEO1	Q92859	1461 aa		22.52	■■□□□ 1.2
CDHR2-204	ENST00000508085	FRMPD1	Q5SYB0	1578 aa		22.51	■■□□□ 1.19
CDHR2-204	ENST00000508085	CFAP74	Q9C0B2	1584 aa		22.5	■■□□□ 1.19
CDHR2-204	ENST00000508085	KDM4F	A0A1W2PPD8	638 aa		22.49	■■□□□ 1.19
CDHR2-204	ENST00000508085	KIF14	Q15058	1648 aa		22.49	■■□□□ 1.19
CDHR2-204	ENST00000508085	PHLDB1	Q86UU1	1377 aa		22.48	■■□□□ 1.19
CDHR2-204	ENST00000508085	MYO5C	Q9NQX4	1742 aa		22.48	■■□□□ 1.19
CDHR2-204	ENST00000508085	ATP1B4	Q9UN42	357 aa	Predicted RBP	22.47	■■□□□ 1.19
CDHR2-204	ENST00000508085	RICTOR	Q6R327	1708 aa		22.47	■■□□□ 1.19
CDHR2-204	ENST00000508085	CLIP1	P30622	1438 aa		22.47	■■□□□ 1.19
CDHR2-204	ENST00000508085	CASKIN1	Q8WXD9	1431 aa		22.47	■■□□□ 1.19
CDHR2-204	ENST00000508085	ADGRL1	O94910	1474 aa		22.46	■■□□□ 1.19
CDHR2-204	ENST00000508085	FANCA	O15360	1455 aa		22.43	■■□□□ 1.18
CDHR2-204	ENST00000508085	FYCO1	Q9BQS8	1478 aa		22.42	■■□□□ 1.18
CDHR2-204	ENST00000508085	CCDC18	Q5T9S5	1454 aa		22.41	■■□□□ 1.18
CDHR2-204	ENST00000508085	TRO	Q12816	1431 aa	Predicted RBP	22.4	■■□□□ 1.18
CDHR2-204	ENST00000508085	AKNA	Q7Z591	1439 aa		22.4	■■□□□ 1.18
CDHR2-204	ENST00000508085	RAPGEF3	O95398	923 aa		22.38	■■□□□ 1.17
CDHR2-204	ENST00000508085	PLCH2	O75038	1416 aa		22.37	■■□□□ 1.17
CDHR2-204	ENST00000508085	CDC42BPB	Q9Y5S2	1711 aa		22.36	■■□□□ 1.17
CDHR2-204	ENST00000508085	CDK11A	Q9UQ88	783 aa	Predicted RBP	22.35	■■□□□ 1.17
CDHR2-204	ENST00000508085	DENND4B	O75064	1496 aa	Predicted RBP	22.34	■■□□□ 1.17
CDHR2-204	ENST00000508085	ARHGEF40	Q8TER5	1519 aa		22.33	■■□□□ 1.17
CDHR2-204	ENST00000508085	ZMYM4	Q5VZL5	1548 aa		22.32	■■□□□ 1.16
CDHR2-204	ENST00000508085	PREX2	Q70Z35	1606 aa		22.32	■■□□□ 1.16
CDHR2-204	ENST00000508085	CEP162	Q5TB80	1403 aa		22.31	■■□□□ 1.16

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms