RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	NISCH	Q9Y2I1	1504 aa		34.2	■■■■□ 3.07
CDHR2-204	ENST00000508085	CCDC180	Q9P1Z9	1646 aa		30.62	■■■□□ 2.49
CDHR2-204	ENST00000508085	ABCC9	O60706	1549 aa		30.13	■■■□□ 2.41
CDHR2-204	ENST00000508085	RB1CC1	Q8TDY2	1594 aa		28.88	■■■□□ 2.21
CDHR2-204	ENST00000508085	NACAD	O15069	1562 aa		28.77	■■■□□ 2.2
CDHR2-204	ENST00000508085	DCAF8L2	P0C7V8	631 aa		28.52	■■■□□ 2.16
CDHR2-204	ENST00000508085	MYO15B	Q96JP2	1530 aa		28.5	■■■□□ 2.15
CDHR2-204	ENST00000508085	ZCCHC6	Q5VYS8	1495 aa	Known RBP	28.45	■■■□□ 2.14
CDHR2-204	ENST00000508085	UNC13A	Q9UPW8	1703 aa		28.43	■■■□□ 2.14
CDHR2-204	ENST00000508085	DCAF1	Q9Y4B6	1507 aa		28.28	■■■□□ 2.12
CDHR2-204	ENST00000508085	BICRA	Q9NZM4	1560 aa		28.1	■■■□□ 2.09
CDHR2-204	ENST00000508085	PABPN1	Q86U42	306 aa	Known RBP eCLIP	28.04	■■■□□ 2.08
CDHR2-204	ENST00000508085	DNAJC5B	Q9UF47	199 aa		27.91	■■■□□ 2.06
CDHR2-204	ENST00000508085	SCRIB	Q14160	1630 aa		27.89	■■■□□ 2.05
CDHR2-204	ENST00000508085	SHROOM4	Q9ULL8	1493 aa		27.68	■■■□□ 2.02
CDHR2-204	ENST00000508085	EIF4G1	Q04637	1599 aa	Known RBP	27.32	■■□□□ 1.96
CDHR2-204	ENST00000508085	CC2D2A	Q9P2K1	1620 aa		27.3	■■□□□ 1.96
CDHR2-204	ENST00000508085	CECR2	Q9BXF3	1484 aa		27.09	■■□□□ 1.93
CDHR2-204	ENST00000508085	SMARCA4	P51532	1647 aa		26.65	■■□□□ 1.86
CDHR2-204	ENST00000508085	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	26.51	■■□□□ 1.83
CDHR2-204	ENST00000508085	NCAPD3	P42695	1498 aa		26.51	■■□□□ 1.83
CDHR2-204	ENST00000508085	ATAD2B	Q9ULI0	1458 aa		26.51	■■□□□ 1.83
CDHR2-204	ENST00000508085	SMARCA2	P51531	1590 aa		26.47	■■□□□ 1.83
CDHR2-204	ENST00000508085	HMGXB3	Q12766	1538 aa		26.42	■■□□□ 1.82
CDHR2-204	ENST00000508085	PEG3	Q9GZU2	1588 aa		26.39	■■□□□ 1.82
CDHR2-204	ENST00000508085	MROH2B	Q7Z745	1585 aa		26.38	■■□□□ 1.81
CDHR2-204	ENST00000508085	BAZ1B	Q9UIG0	1483 aa	Known RBP	26.26	■■□□□ 1.79
CDHR2-204	ENST00000508085	WIZ	O95785	1651 aa		26.13	■■□□□ 1.77
CDHR2-204	ENST00000508085	NES	P48681	1621 aa		26.03	■■□□□ 1.76
CDHR2-204	ENST00000508085	ERCC6	Q03468	1493 aa		25.95	■■□□□ 1.74
CDHR2-204	ENST00000508085	LAMC3	Q9Y6N6	1575 aa		25.91	■■□□□ 1.74
CDHR2-204	ENST00000508085	RSF1	Q96T23	1441 aa	Predicted RBP	25.91	■■□□□ 1.74
CDHR2-204	ENST00000508085	KIF21A	Q7Z4S6	1674 aa		25.82	■■□□□ 1.72
CDHR2-204	ENST00000508085	CUX2	O14529	1486 aa		25.81	■■□□□ 1.72
CDHR2-204	ENST00000508085	TOP2A	P11388	1531 aa	Known RBP	25.78	■■□□□ 1.72
CDHR2-204	ENST00000508085	THOC2	Q8NI27	1593 aa	Known RBP	25.77	■■□□□ 1.72
CDHR2-204	ENST00000508085	CADPS	Q9ULU8	1353 aa		25.69	■■□□□ 1.7
CDHR2-204	ENST00000508085	PDS5B	Q9NTI5	1447 aa		25.65	■■□□□ 1.7
CDHR2-204	ENST00000508085	CFTR	P13569	1480 aa		25.53	■■□□□ 1.68
CDHR2-204	ENST00000508085	PRDM2	Q13029	1718 aa		25.51	■■□□□ 1.68
CDHR2-204	ENST00000508085	MRC2	Q9UBG0	1479 aa		25.47	■■□□□ 1.67
CDHR2-204	ENST00000508085	CCDC88B	A6NC98	1476 aa		25.45	■■□□□ 1.66
CDHR2-204	ENST00000508085	FANCD2	Q9BXW9	1451 aa		25.45	■■□□□ 1.66
CDHR2-204	ENST00000508085	WDR62	O43379	1518 aa		25.44	■■□□□ 1.66
CDHR2-204	ENST00000508085	CEP164	Q9UPV0	1460 aa		25.44	■■□□□ 1.66
CDHR2-204	ENST00000508085	DNAJC5	Q9H3Z4	198 aa		25.29	■■□□□ 1.64
CDHR2-204	ENST00000508085	URB2	Q14146	1524 aa	Known RBP	25.26	■■□□□ 1.63
CDHR2-204	ENST00000508085	TOPBP1	Q92547	1522 aa		25.04	■■□□□ 1.6
CDHR2-204	ENST00000508085	DNMBP	Q6XZF7	1577 aa		25	■■□□□ 1.59
CDHR2-204	ENST00000508085	SUPT5H	O00267	1087 aa	Known RBP	24.96	■■□□□ 1.59
CDHR2-204	ENST00000508085	ABCC8	Q09428	1581 aa		24.95	■■□□□ 1.58
CDHR2-204	ENST00000508085	IFT140	Q96RY7	1462 aa		24.9	■■□□□ 1.58
CDHR2-204	ENST00000508085	ZNF608	Q9ULD9	1512 aa	Predicted RBP	24.86	■■□□□ 1.57
CDHR2-204	ENST00000508085	TARBP1	Q13395	1621 aa	Known RBP	24.85	■■□□□ 1.57
CDHR2-204	ENST00000508085	EIF4G3	O43432	1585 aa	Known RBP	24.81	■■□□□ 1.56
CDHR2-204	ENST00000508085	POLA1	P09884	1462 aa	Predicted RBP	24.8	■■□□□ 1.56
CDHR2-204	ENST00000508085	CUX1	P39880	1505 aa		24.76	■■□□□ 1.55
CDHR2-204	ENST00000508085	FGD5	Q6ZNL6	1462 aa		24.7	■■□□□ 1.54
CDHR2-204	ENST00000508085	RAD54L2	Q9Y4B4	1467 aa		24.69	■■□□□ 1.54
CDHR2-204	ENST00000508085	AQR	O60306	1485 aa	Known RBP eCLIP	24.65	■■□□□ 1.54
CDHR2-204	ENST00000508085	WDR97	A6NE52	1622 aa		24.64	■■□□□ 1.54
CDHR2-204	ENST00000508085	SOGA1	O94964	1423 aa		24.63	■■□□□ 1.53
CDHR2-204	ENST00000508085	CHD1	O14646	1710 aa		24.61	■■□□□ 1.53
CDHR2-204	ENST00000508085	OSCAR	Q8IYS5	282 aa		24.59	■■□□□ 1.53
CDHR2-204	ENST00000508085	TDRD9	Q8NDG6	1382 aa	Known RBP	24.54	■■□□□ 1.52
CDHR2-204	ENST00000508085	BIVM-ERCC5	R4GMW8	1640 aa		24.53	■■□□□ 1.52
CDHR2-204	ENST00000508085	SYNJ1	O43426	1573 aa		24.49	■■□□□ 1.51
CDHR2-204	ENST00000508085	TOP2B	Q02880	1626 aa		24.49	■■□□□ 1.51
CDHR2-204	ENST00000508085	PBRM1	Q86U86	1689 aa		24.49	■■□□□ 1.51
CDHR2-204	ENST00000508085	ABCA5	Q8WWZ7	1642 aa		24.45	■■□□□ 1.5
CDHR2-204	ENST00000508085	ABCA10	Q8WWZ4	1543 aa		24.44	■■□□□ 1.5
CDHR2-204	ENST00000508085	SNAPC4	Q5SXM2	1469 aa		24.44	■■□□□ 1.5
CDHR2-204	ENST00000508085	WRN	Q14191	1432 aa	Predicted RBP eCLIP	24.42	■■□□□ 1.5
CDHR2-204	ENST00000508085	RIMBP3C	A6NJZ7	1639 aa		24.42	■■□□□ 1.5
CDHR2-204	ENST00000508085	RIMBP3B	A6NNM3	1639 aa		24.42	■■□□□ 1.5
CDHR2-204	ENST00000508085	RIMBP3	Q9UFD9	1639 aa		24.42	■■□□□ 1.5
CDHR2-204	ENST00000508085	GRIN2B	Q13224	1484 aa		24.4	■■□□□ 1.5
CDHR2-204	ENST00000508085	MAGI1	Q96QZ7	1491 aa	Predicted RBP	24.38	■■□□□ 1.49
CDHR2-204	ENST00000508085	GAPVD1	Q14C86	1478 aa		24.37	■■□□□ 1.49
CDHR2-204	ENST00000508085	ARHGEF11	O15085	1522 aa		24.32	■■□□□ 1.48
CDHR2-204	ENST00000508085	FBLN2	P98095	1184 aa		24.32	■■□□□ 1.48
CDHR2-204	ENST00000508085	TRIM41	Q8WV44	630 aa		24.32	■■□□□ 1.48
CDHR2-204	ENST00000508085	SYNJ2	O15056	1496 aa		24.28	■■□□□ 1.48
CDHR2-204	ENST00000508085	CLASP1	Q7Z460	1538 aa		24.26	■■□□□ 1.47
CDHR2-204	ENST00000508085	ADAMTS12	P58397	1594 aa		24.21	■■□□□ 1.47
CDHR2-204	ENST00000508085	CHMP7	Q8WUX9	453 aa	Predicted RBP	24.2	■■□□□ 1.46
CDHR2-204	ENST00000508085	ERICH3	Q5RHP9	1530 aa		24.15	■■□□□ 1.46
CDHR2-204	ENST00000508085	GRIN2A	Q12879	1464 aa		24.12	■■□□□ 1.45
CDHR2-204	ENST00000508085	ARAP1	Q96P48	1450 aa		24.12	■■□□□ 1.45
CDHR2-204	ENST00000508085	CEP170	Q5SW79	1584 aa		24.07	■■□□□ 1.44
CDHR2-204	ENST00000508085	FHAD1	B1AJZ9	1412 aa		24.06	■■□□□ 1.44
CDHR2-204	ENST00000508085	NUP160	Q12769	1436 aa		24.01	■■□□□ 1.43
CDHR2-204	ENST00000508085	CYB5RL	Q6IPT4	315 aa		24	■■□□□ 1.43
CDHR2-204	ENST00000508085	SHROOM2	Q13796	1616 aa		23.95	■■□□□ 1.43
CDHR2-204	ENST00000508085	ERCC6L2	Q5T890	1561 aa		23.93	■■□□□ 1.42
CDHR2-204	ENST00000508085	CUL7	Q14999	1698 aa		23.92	■■□□□ 1.42
CDHR2-204	ENST00000508085	KIF27	Q86VH2	1401 aa		23.91	■■□□□ 1.42
CDHR2-204	ENST00000508085	RUSC2	Q8N2Y8	1516 aa		23.88	■■□□□ 1.41
CDHR2-204	ENST00000508085	IGF1R	P08069	1367 aa		23.86	■■□□□ 1.41
CDHR2-204	ENST00000508085	PRG4	Q92954	1404 aa	Predicted RBP	23.71	■■□□□ 1.39

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms