RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 KANK4Q5T7N3 995 aaPredicted RBP26.86■■□□□ 1.89
SFXN1-208ENST00000507823 TIAM1Q13009 1591 aa26.86■■□□□ 1.89
SFXN1-208ENST00000507823 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
SFXN1-208ENST00000507823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.86■■□□□ 1.89
SFXN1-208ENST00000507823 AQRO60306 1485 aaKnown RBP eCLIP26.84■■□□□ 1.896e-7■■■■□ 22.6
SFXN1-208ENST00000507823 RRBP1Q9P2E9 1410 aaKnown RBP26.83■■□□□ 1.89
SFXN1-208ENST00000507823 SAMD9Q5K651 1589 aa26.82■■□□□ 1.88
SFXN1-208ENST00000507823 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
SFXN1-208ENST00000507823 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
SFXN1-208ENST00000507823 CFAP43Q8NDM7 1665 aa26.8■■□□□ 1.88
SFXN1-208ENST00000507823 PCF11O94913 1555 aaKnown RBP26.8■■□□□ 1.88
SFXN1-208ENST00000507823 GRIN2BQ13224 1484 aa26.78■■□□□ 1.88
SFXN1-208ENST00000507823 FYCO1Q9BQS8 1478 aa26.77■■□□□ 1.88
SFXN1-208ENST00000507823 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
SFXN1-208ENST00000507823 FHOD3Q2V2M9 1422 aa26.75■■□□□ 1.87
SFXN1-208ENST00000507823 CASKIN1Q8WXD9 1431 aa26.75■■□□□ 1.87
SFXN1-208ENST00000507823 LRRC9Q6ZRR7 1453 aa26.73■■□□□ 1.87
SFXN1-208ENST00000507823 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
SFXN1-208ENST00000507823 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
SFXN1-208ENST00000507823 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
SFXN1-208ENST00000507823 SNAPC4Q5SXM2 1469 aa26.67■■□□□ 1.86
SFXN1-208ENST00000507823 HNRNPUL2Q1KMD3 747 aaKnown RBP26.66■■□□□ 1.86
SFXN1-208ENST00000507823 CCNB3Q8WWL7 1395 aa26.62■■□□□ 1.85
SFXN1-208ENST00000507823 P3H3Q8IVL6 736 aa26.62■■□□□ 1.85
SFXN1-208ENST00000507823 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
SFXN1-208ENST00000507823 IQGAP2Q13576 1575 aa26.6■■□□□ 1.85
SFXN1-208ENST00000507823 UGGT2Q9NYU1 1516 aa26.53■■□□□ 1.84
SFXN1-208ENST00000507823 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
SFXN1-208ENST00000507823 LRRIQ1Q96JM4 1722 aa26.5■■□□□ 1.83
SFXN1-208ENST00000507823 PHLDB1Q86UU1 1377 aa26.5■■□□□ 1.83
SFXN1-208ENST00000507823 KIAA0586Q9BVV6 1533 aa26.47■■□□□ 1.83
SFXN1-208ENST00000507823 GRIN2AQ12879 1464 aa26.47■■□□□ 1.83
SFXN1-208ENST00000507823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.82
SFXN1-208ENST00000507823 CLSPNQ9HAW4 1339 aa26.42■■□□□ 1.82
SFXN1-208ENST00000507823 SYNJ2O15056 1496 aa26.39■■□□□ 1.82
SFXN1-208ENST00000507823 CCDC18Q5T9S5 1454 aa26.39■■□□□ 1.81
SFXN1-208ENST00000507823 HECW1Q76N89 1606 aa26.38■■□□□ 1.81
SFXN1-208ENST00000507823 DHX57Q6P158 1386 aaKnown RBP26.36■■□□□ 1.81
SFXN1-208ENST00000507823 EHBP1L1Q8N3D4 1523 aa26.36■■□□□ 1.81
SFXN1-208ENST00000507823 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
SFXN1-208ENST00000507823 ATP1B4Q9UN42 357 aaPredicted RBP26.35■■□□□ 1.81
SFXN1-208ENST00000507823 DISP1Q96F81 1524 aa26.34■■□□□ 1.81
SFXN1-208ENST00000507823 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
SFXN1-208ENST00000507823 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
SFXN1-208ENST00000507823 MTUS2Q5JR59 1369 aa26.3■■□□□ 1.8
SFXN1-208ENST00000507823 SUPT6HQ7KZ85 1726 aaKnown RBP26.29■■□□□ 1.8
SFXN1-208ENST00000507823 NUP160Q12769 1436 aa26.29■■□□□ 1.8
SFXN1-208ENST00000507823 FGD6Q6ZV73 1430 aa26.28■■□□□ 1.8
SFXN1-208ENST00000507823 EPRSP07814 1512 aaKnown RBP26.26■■□□□ 1.79
SFXN1-208ENST00000507823 NCOA2Q15596 1464 aa26.26■■□□□ 1.79
SFXN1-208ENST00000507823 MAGI3Q5TCQ9 1506 aa26.26■■□□□ 1.79
SFXN1-208ENST00000507823 SETD5Q9C0A6 1442 aa26.21■■□□□ 1.79
SFXN1-208ENST00000507823 MYOM3Q5VTT5 1437 aa26.21■■□□□ 1.79
SFXN1-208ENST00000507823 RAB3GAP2Q9H2M9 1393 aa26.2■■□□□ 1.78
SFXN1-208ENST00000507823 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
SFXN1-208ENST00000507823 FAM50AQ14320 339 aaKnown RBP26.16■■□□□ 1.78
SFXN1-208ENST00000507823 RAPGEF6Q8TEU7 1601 aa26.15■■□□□ 1.78
SFXN1-208ENST00000507823 ITGAEP38570 1179 aa26.14■■□□□ 1.77
SFXN1-208ENST00000507823 CDK13Q14004 1512 aaKnown RBP26.13■■□□□ 1.77
SFXN1-208ENST00000507823 NUP153P49790 1475 aaKnown RBP26.12■■□□□ 1.77
SFXN1-208ENST00000507823 TCOF1Q13428 1488 aaKnown RBP26.12■■□□□ 1.77
SFXN1-208ENST00000507823 PTPN23Q9H3S7 1636 aa26.09■■□□□ 1.77
SFXN1-208ENST00000507823 MAPKBP1O60336 1514 aa26.07■■□□□ 1.76
SFXN1-208ENST00000507823 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
SFXN1-208ENST00000507823 MIA2Q96PC5 1412 aa26.04■■□□□ 1.76
SFXN1-208ENST00000507823 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
SFXN1-208ENST00000507823 PTPRKQ15262 1439 aa26.03■■□□□ 1.76
SFXN1-208ENST00000507823 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
SFXN1-208ENST00000507823 HFM1A2PYH4 1435 aa26.02■■□□□ 1.76
SFXN1-208ENST00000507823 FBLN2P98095 1184 aa25.98■■□□□ 1.75
SFXN1-208ENST00000507823 ABCA8O94911 1581 aa25.95■■□□□ 1.74
SFXN1-208ENST00000507823 PLB1Q6P1J6 1458 aa25.94■■□□□ 1.74
SFXN1-208ENST00000507823 AKNAQ7Z591 1439 aa25.94■■□□□ 1.74
SFXN1-208ENST00000507823 CHD1O14646 1710 aa25.92■■□□□ 1.74
SFXN1-208ENST00000507823 ADCY10Q96PN6 1610 aa25.92■■□□□ 1.74
SFXN1-208ENST00000507823 NAIPQ13075 1403 aa25.91■■□□□ 1.74
SFXN1-208ENST00000507823 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
SFXN1-208ENST00000507823 TROQ12816 1431 aaPredicted RBP25.91■■□□□ 1.74
SFXN1-208ENST00000507823 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.74
SFXN1-208ENST00000507823 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
SFXN1-208ENST00000507823 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
SFXN1-208ENST00000507823 UACAQ9BZF9 1416 aa25.84■■□□□ 1.73
SFXN1-208ENST00000507823 PRG4Q92954 1404 aaPredicted RBP25.81■■□□□ 1.72
SFXN1-208ENST00000507823 ITSN2Q9NZM3 1697 aa25.8■■□□□ 1.72
SFXN1-208ENST00000507823 DNMT1P26358 1616 aaKnown RBP25.8■■□□□ 1.72
SFXN1-208ENST00000507823 ARID3CA6NKF2 412 aa25.8■■□□□ 1.72
SFXN1-208ENST00000507823 TIMELESSQ9UNS1 1208 aa25.79■■□□□ 1.72
SFXN1-208ENST00000507823 ATP10BO94823 1461 aa25.76■■□□□ 1.71
SFXN1-208ENST00000507823 ROCK1Q13464 1354 aa25.76■■□□□ 1.71
SFXN1-208ENST00000507823 KIF14Q15058 1648 aa25.75■■□□□ 1.71
SFXN1-208ENST00000507823 DAPK1P53355 1430 aa25.74■■□□□ 1.71
SFXN1-208ENST00000507823 GPATCH8Q9UKJ3 1502 aaKnown RBP25.73■■□□□ 1.71
SFXN1-208ENST00000507823 PTPRGP23470 1445 aa25.72■■□□□ 1.71
SFXN1-208ENST00000507823 ABCC5O15440 1437 aa25.71■■□□□ 1.71
SFXN1-208ENST00000507823 ABCC10Q5T3U5 1492 aa25.7■■□□□ 1.7
SFXN1-208ENST00000507823 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
SFXN1-208ENST00000507823 ACIN1Q9UKV3 1341 aaKnown RBP25.67■■□□□ 1.7
SFXN1-208ENST00000507823 CAMSAP2Q08AD1 1489 aa25.67■■□□□ 1.7
SFXN1-208ENST00000507823 KDM6BO15054 1643 aa25.65■■□□□ 1.7
SFXN1-208ENST00000507823 CDC42BPAQ5VT25 1732 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms