RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 NISCHQ9Y2I1 1504 aa38.92■■■■□ 3.82
SFXN1-208ENST00000507823 CCDC180Q9P1Z9 1646 aa33.7■■■□□ 2.99
SFXN1-208ENST00000507823 ZCCHC6Q5VYS8 1495 aaKnown RBP32.84■■■□□ 2.85
SFXN1-208ENST00000507823 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
SFXN1-208ENST00000507823 SHROOM4Q9ULL8 1493 aa31.98■■■□□ 2.71
SFXN1-208ENST00000507823 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
SFXN1-208ENST00000507823 MYO15BQ96JP2 1530 aa31.67■■■□□ 2.66
SFXN1-208ENST00000507823 NACADO15069 1562 aa31.23■■■□□ 2.59
SFXN1-208ENST00000507823 ABCC9O60706 1549 aa31.23■■■□□ 2.59
SFXN1-208ENST00000507823 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
SFXN1-208ENST00000507823 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
SFXN1-208ENST00000507823 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
SFXN1-208ENST00000507823 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
SFXN1-208ENST00000507823 UNC13AQ9UPW8 1703 aa30.26■■■□□ 2.43
SFXN1-208ENST00000507823 CECR2Q9BXF3 1484 aa30.18■■■□□ 2.42
SFXN1-208ENST00000507823 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
SFXN1-208ENST00000507823 MROH2BQ7Z745 1585 aa30.08■■■□□ 2.41
SFXN1-208ENST00000507823 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
SFXN1-208ENST00000507823 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
SFXN1-208ENST00000507823 WIZO95785 1651 aa29.85■■■□□ 2.37
SFXN1-208ENST00000507823 SMARCA4P51532 1647 aa29.8■■■□□ 2.36
SFXN1-208ENST00000507823 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
SFXN1-208ENST00000507823 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
SFXN1-208ENST00000507823 PEG3Q9GZU2 1588 aa29.48■■■□□ 2.31
SFXN1-208ENST00000507823 EIF4G1Q04637 1599 aaKnown RBP29.4■■■□□ 2.3
SFXN1-208ENST00000507823 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
SFXN1-208ENST00000507823 CCDC88BA6NC98 1476 aa29.27■■■□□ 2.28
SFXN1-208ENST00000507823 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
SFXN1-208ENST00000507823 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
SFXN1-208ENST00000507823 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
SFXN1-208ENST00000507823 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
SFXN1-208ENST00000507823 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
SFXN1-208ENST00000507823 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
SFXN1-208ENST00000507823 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
SFXN1-208ENST00000507823 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
SFXN1-208ENST00000507823 WRNQ14191 1432 aaPredicted RBP eCLIP28.56■■■□□ 2.16
SFXN1-208ENST00000507823 EEA1Q15075 1411 aa28.49■■■□□ 2.15
SFXN1-208ENST00000507823 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
SFXN1-208ENST00000507823 SOGA1O94964 1423 aa28.39■■■□□ 2.14
SFXN1-208ENST00000507823 CFTRP13569 1480 aa28.34■■■□□ 2.13
SFXN1-208ENST00000507823 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
SFXN1-208ENST00000507823 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
SFXN1-208ENST00000507823 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
SFXN1-208ENST00000507823 PRDM2Q13029 1718 aa28.26■■■□□ 2.11
SFXN1-208ENST00000507823 RUSC2Q8N2Y8 1516 aa28.26■■■□□ 2.11
SFXN1-208ENST00000507823 CSRNP3Q8WYN3 585 aa28.22■■■□□ 2.11
SFXN1-208ENST00000507823 PCGF6Q9BYE7 350 aa28.17■■■□□ 2.1
SFXN1-208ENST00000507823 TNIKQ9UKE5 1360 aa28.14■■■□□ 2.1
SFXN1-208ENST00000507823 KIF21BO75037 1637 aa28.11■■■□□ 2.09
SFXN1-208ENST00000507823 TRIM26Q12899 539 aaPredicted RBP28.09■■■□□ 2.09
SFXN1-208ENST00000507823 CUX1P39880 1505 aa28.09■■■□□ 2.09
SFXN1-208ENST00000507823 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
SFXN1-208ENST00000507823 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
SFXN1-208ENST00000507823 GOLGA3Q08378 1498 aa28.09■■■□□ 2.09
SFXN1-208ENST00000507823 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
SFXN1-208ENST00000507823 CEP162Q5TB80 1403 aa28■■■□□ 2.07
SFXN1-208ENST00000507823 HRCP23327 699 aa27.91■■■□□ 2.06
SFXN1-208ENST00000507823 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
SFXN1-208ENST00000507823 PRXQ9BXM0 1461 aa27.81■■■□□ 2.04
SFXN1-208ENST00000507823 UBTFP17480 764 aaKnown RBP27.81■■■□□ 2.04
SFXN1-208ENST00000507823 RAPGEF2Q9Y4G8 1499 aa27.8■■■□□ 2.04
SFXN1-208ENST00000507823 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
SFXN1-208ENST00000507823 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
SFXN1-208ENST00000507823 LAMC3Q9Y6N6 1575 aa27.74■■■□□ 2.03
SFXN1-208ENST00000507823 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
SFXN1-208ENST00000507823 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
SFXN1-208ENST00000507823 NESP48681 1621 aa27.64■■■□□ 2.01
SFXN1-208ENST00000507823 CLIP1P30622 1438 aa27.64■■■□□ 2.01
SFXN1-208ENST00000507823 CUX2O14529 1486 aa27.56■■■□□ 2
SFXN1-208ENST00000507823 TOPBP1Q92547 1522 aa27.56■■■□□ 2
SFXN1-208ENST00000507823 IGF1RP08069 1367 aa27.51■■■□□ 2
SFXN1-208ENST00000507823 VPS8Q8N3P4 1428 aa27.51■■■□□ 2
SFXN1-208ENST00000507823 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
SFXN1-208ENST00000507823 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
SFXN1-208ENST00000507823 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
SFXN1-208ENST00000507823 PPARGC1BQ86YN6 1023 aaKnown RBP27.43■■□□□ 1.98
SFXN1-208ENST00000507823 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
SFXN1-208ENST00000507823 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
SFXN1-208ENST00000507823 WDR97A6NE52 1622 aa27.37■■□□□ 1.97
SFXN1-208ENST00000507823 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
SFXN1-208ENST00000507823 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
SFXN1-208ENST00000507823 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
SFXN1-208ENST00000507823 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
SFXN1-208ENST00000507823 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
SFXN1-208ENST00000507823 CUL7Q14999 1698 aa27.26■■□□□ 1.95
SFXN1-208ENST00000507823 ARHGAP35Q9NRY4 1499 aa27.24■■□□□ 1.95
SFXN1-208ENST00000507823 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
SFXN1-208ENST00000507823 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.94
SFXN1-208ENST00000507823 RANGAP1P46060 587 aaPredicted RBP27.1■■□□□ 1.93
SFXN1-208ENST00000507823 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
SFXN1-208ENST00000507823 APLP2Q06481 763 aa27.08■■□□□ 1.93
SFXN1-208ENST00000507823 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
SFXN1-208ENST00000507823 TTBK1Q5TCY1 1321 aaPredicted RBP27.05■■□□□ 1.92
SFXN1-208ENST00000507823 CTTNBP2Q8WZ74 1663 aa27.03■■□□□ 1.92
SFXN1-208ENST00000507823 MAP3K1Q13233 1512 aa27■■□□□ 1.91
SFXN1-208ENST00000507823 TDRD9Q8NDG6 1382 aaKnown RBP27■■□□□ 1.91
SFXN1-208ENST00000507823 EFCAB5A4FU69 1503 aa26.99■■□□□ 1.91
SFXN1-208ENST00000507823 WDR62O43379 1518 aa26.98■■□□□ 1.91
SFXN1-208ENST00000507823 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
SFXN1-208ENST00000507823 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 929.9 ms