RNA–Protein interactions for RNA: ENST00000507473.1

PDCD6-205, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 486 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-205ENST00000507473 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
PDCD6-205ENST00000507473 PPARGC1BQ86YN6 1023 aaKnown RBP12.18□□□□□ -0.46
PDCD6-205ENST00000507473 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
PDCD6-205ENST00000507473 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
PDCD6-205ENST00000507473 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
PDCD6-205ENST00000507473 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
PDCD6-205ENST00000507473 GRIN2AQ12879 1464 aa12.13□□□□□ -0.47
PDCD6-205ENST00000507473 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
PDCD6-205ENST00000507473 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
PDCD6-205ENST00000507473 SAMD9Q5K651 1589 aa12.1□□□□□ -0.47
PDCD6-205ENST00000507473 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
PDCD6-205ENST00000507473 KIAA0586Q9BVV6 1533 aa12.09□□□□□ -0.47
PDCD6-205ENST00000507473 FHOD3Q2V2M9 1422 aa12.09□□□□□ -0.47
PDCD6-205ENST00000507473 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
PDCD6-205ENST00000507473 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
PDCD6-205ENST00000507473 UGGT2Q9NYU1 1516 aa12.06□□□□□ -0.48
PDCD6-205ENST00000507473 CEP170Q5SW79 1584 aa12.06□□□□□ -0.48
PDCD6-205ENST00000507473 NUP160Q12769 1436 aa12.06□□□□□ -0.48
PDCD6-205ENST00000507473 FBLN2P98095 1184 aa12.06□□□□□ -0.48
PDCD6-205ENST00000507473 APLP2Q06481 763 aa12.04□□□□□ -0.48
PDCD6-205ENST00000507473 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
PDCD6-205ENST00000507473 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
PDCD6-205ENST00000507473 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
PDCD6-205ENST00000507473 MAP3K1Q13233 1512 aa12.02□□□□□ -0.48
PDCD6-205ENST00000507473 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
PDCD6-205ENST00000507473 FMN1Q68DA7 1419 aa12.01□□□□□ -0.49
PDCD6-205ENST00000507473 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
PDCD6-205ENST00000507473 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
PDCD6-205ENST00000507473 FYCO1Q9BQS8 1478 aa11.99□□□□□ -0.49
PDCD6-205ENST00000507473 CHD1O14646 1710 aa11.98□□□□□ -0.49
PDCD6-205ENST00000507473 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
PDCD6-205ENST00000507473 KIAA0556O60303 1618 aa11.97□□□□□ -0.49
PDCD6-205ENST00000507473 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
PDCD6-205ENST00000507473 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
PDCD6-205ENST00000507473 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
PDCD6-205ENST00000507473 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
PDCD6-205ENST00000507473 CARMIL2Q6F5E8 1435 aa11.91□□□□□ -0.5
PDCD6-205ENST00000507473 PRG4Q92954 1404 aaPredicted RBP11.89□□□□□ -0.51
PDCD6-205ENST00000507473 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
PDCD6-205ENST00000507473 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
PDCD6-205ENST00000507473 RRBP1Q9P2E9 1410 aaKnown RBP11.86□□□□□ -0.51
PDCD6-205ENST00000507473 EPRSP07814 1512 aaKnown RBP11.86□□□□□ -0.51
PDCD6-205ENST00000507473 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
PDCD6-205ENST00000507473 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
PDCD6-205ENST00000507473 NUP153P49790 1475 aaKnown RBP11.85□□□□□ -0.51
PDCD6-205ENST00000507473 RAPGEF6Q8TEU7 1601 aa11.85□□□□□ -0.51
PDCD6-205ENST00000507473 PHLDB1Q86UU1 1377 aa11.84□□□□□ -0.51
PDCD6-205ENST00000507473 MAGI3Q5TCQ9 1506 aa11.84□□□□□ -0.51
PDCD6-205ENST00000507473 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
PDCD6-205ENST00000507473 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
PDCD6-205ENST00000507473 HRCP23327 699 aa11.83□□□□□ -0.52
PDCD6-205ENST00000507473 ABCA8O94911 1581 aa11.83□□□□□ -0.52
PDCD6-205ENST00000507473 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
PDCD6-205ENST00000507473 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
PDCD6-205ENST00000507473 PTPRGP23470 1445 aa11.82□□□□□ -0.52
PDCD6-205ENST00000507473 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
PDCD6-205ENST00000507473 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
PDCD6-205ENST00000507473 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
PDCD6-205ENST00000507473 ARHGEF11O15085 1522 aa11.8□□□□□ -0.52
PDCD6-205ENST00000507473 EHBP1L1Q8N3D4 1523 aa11.8□□□□□ -0.52
PDCD6-205ENST00000507473 NCOA2Q15596 1464 aa11.79□□□□□ -0.52
PDCD6-205ENST00000507473 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
PDCD6-205ENST00000507473 ATP10BO94823 1461 aa11.76□□□□□ -0.53
PDCD6-205ENST00000507473 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
PDCD6-205ENST00000507473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.532e-7■■■■■ 43.8
PDCD6-205ENST00000507473 FGD6Q6ZV73 1430 aa11.75□□□□□ -0.53
PDCD6-205ENST00000507473 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
PDCD6-205ENST00000507473 CDK11AQ9UQ88 783 aaPredicted RBP11.74□□□□□ -0.53
PDCD6-205ENST00000507473 MYOM3Q5VTT5 1437 aa11.74□□□□□ -0.53
PDCD6-205ENST00000507473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
PDCD6-205ENST00000507473 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
PDCD6-205ENST00000507473 FAM50AQ14320 339 aaKnown RBP11.71□□□□□ -0.53
PDCD6-205ENST00000507473 ABCC2Q92887 1545 aa11.7□□□□□ -0.54
PDCD6-205ENST00000507473 UHRF1BP1LA0JNW5 1464 aa11.7□□□□□ -0.54
PDCD6-205ENST00000507473 PLEKHD1A6NEE1 506 aa11.69□□□□□ -0.54
PDCD6-205ENST00000507473 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
PDCD6-205ENST00000507473 ADCY10Q96PN6 1610 aa11.68□□□□□ -0.54
PDCD6-205ENST00000507473 ITGAEP38570 1179 aa11.68□□□□□ -0.54
PDCD6-205ENST00000507473 MIA2Q96PC5 1412 aa11.68□□□□□ -0.54
PDCD6-205ENST00000507473 KIF14Q15058 1648 aa11.67□□□□□ -0.54
PDCD6-205ENST00000507473 PTPN23Q9H3S7 1636 aa11.67□□□□□ -0.54
PDCD6-205ENST00000507473 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
PDCD6-205ENST00000507473 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
PDCD6-205ENST00000507473 PTPRKQ15262 1439 aa11.66□□□□□ -0.54
PDCD6-205ENST00000507473 ABCC10Q5T3U5 1492 aa11.65□□□□□ -0.54
PDCD6-205ENST00000507473 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.55
PDCD6-205ENST00000507473 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.55
PDCD6-205ENST00000507473 ZNF644Q9H582 1327 aaPredicted RBP11.62□□□□□ -0.55
PDCD6-205ENST00000507473 SETD5Q9C0A6 1442 aa11.62□□□□□ -0.55
PDCD6-205ENST00000507473 ZCCHC11Q5TAX3 1644 aaKnown RBP11.61□□□□□ -0.55
PDCD6-205ENST00000507473 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
PDCD6-205ENST00000507473 CFDP1Q9UEE9 299 aaPredicted RBP11.59□□□□□ -0.55
PDCD6-205ENST00000507473 CDC42BPAQ5VT25 1732 aa11.58□□□□□ -0.56
PDCD6-205ENST00000507473 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
PDCD6-205ENST00000507473 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
PDCD6-205ENST00000507473 ABCC5O15440 1437 aa11.57□□□□□ -0.56
PDCD6-205ENST00000507473 CAMSAP2Q08AD1 1489 aa11.56□□□□□ -0.56
PDCD6-205ENST00000507473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.562e-6■■■■■ 26.8
PDCD6-205ENST00000507473 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
PDCD6-205ENST00000507473 DAPK1P53355 1430 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms