RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 JPH4Q96JJ6 628 aa23.82■■□□□ 1.4
POLR2J3-212ENST00000507355 RUSC2Q8N2Y8 1516 aa23.8■■□□□ 1.4
POLR2J3-212ENST00000507355 FAM69CQ0P6D2 419 aa23.8■■□□□ 1.4
POLR2J3-212ENST00000507355 ABCC10Q5T3U5 1492 aa23.76■■□□□ 1.39
POLR2J3-212ENST00000507355 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
POLR2J3-212ENST00000507355 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
POLR2J3-212ENST00000507355 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
POLR2J3-212ENST00000507355 ADCY10Q96PN6 1610 aa23.73■■□□□ 1.39
POLR2J3-212ENST00000507355 KDM6BO15054 1643 aa23.66■■□□□ 1.38
POLR2J3-212ENST00000507355 TSPOAP1O95153 1857 aa23.66■■□□□ 1.38
POLR2J3-212ENST00000507355 KDM4FA0A1W2PPD8 638 aa23.58■■□□□ 1.37
POLR2J3-212ENST00000507355 KIAA0586Q9BVV6 1533 aa23.58■■□□□ 1.36
POLR2J3-212ENST00000507355 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
POLR2J3-212ENST00000507355 CUL7Q14999 1698 aa23.52■■□□□ 1.36
POLR2J3-212ENST00000507355 IGF1RP08069 1367 aa23.5■■□□□ 1.35
POLR2J3-212ENST00000507355 PTPRGP23470 1445 aa23.47■■□□□ 1.35
POLR2J3-212ENST00000507355 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
POLR2J3-212ENST00000507355 ABCC2Q92887 1545 aa23.41■■□□□ 1.34
POLR2J3-212ENST00000507355 ASXL2Q76L83 1435 aa23.39■■□□□ 1.33
POLR2J3-212ENST00000507355 PPRC1Q5VV67 1664 aaKnown RBP23.38■■□□□ 1.33
POLR2J3-212ENST00000507355 CARMIL2Q6F5E8 1435 aa23.38■■□□□ 1.33
POLR2J3-212ENST00000507355 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
POLR2J3-212ENST00000507355 CARMIL1Q5VZK9 1371 aa23.35■■□□□ 1.33
POLR2J3-212ENST00000507355 ILDR1Q86SU0 546 aaPredicted RBP23.34■■□□□ 1.33
POLR2J3-212ENST00000507355 PLB1Q6P1J6 1458 aa23.34■■□□□ 1.33
POLR2J3-212ENST00000507355 IQGAP2Q13576 1575 aa23.34■■□□□ 1.33
POLR2J3-212ENST00000507355 GLI2P10070 1586 aa23.33■■□□□ 1.33
POLR2J3-212ENST00000507355 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
POLR2J3-212ENST00000507355 UHRF1BP1LA0JNW5 1464 aa23.28■■□□□ 1.32
POLR2J3-212ENST00000507355 UACAQ9BZF9 1416 aa23.27■■□□□ 1.32
POLR2J3-212ENST00000507355 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
POLR2J3-212ENST00000507355 EPRSP07814 1512 aaKnown RBP23.23■■□□□ 1.31
POLR2J3-212ENST00000507355 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
POLR2J3-212ENST00000507355 MAP3K4Q9Y6R4 1608 aa23.23■■□□□ 1.31
POLR2J3-212ENST00000507355 ZCCHC11Q5TAX3 1644 aaKnown RBP23.21■■□□□ 1.31
POLR2J3-212ENST00000507355 KDM5BQ9UGL1 1544 aa23.18■■□□□ 1.3
POLR2J3-212ENST00000507355 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
POLR2J3-212ENST00000507355 HECW2Q9P2P5 1572 aa23.17■■□□□ 1.3
POLR2J3-212ENST00000507355 KIAA0556O60303 1618 aa23.14■■□□□ 1.29
POLR2J3-212ENST00000507355 UGGT2Q9NYU1 1516 aa23.13■■□□□ 1.29
POLR2J3-212ENST00000507355 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
POLR2J3-212ENST00000507355 WDR7Q9Y4E6 1490 aa23.08■■□□□ 1.29
POLR2J3-212ENST00000507355 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
POLR2J3-212ENST00000507355 CTTNBP2Q8WZ74 1663 aa22.98■■□□□ 1.27
POLR2J3-212ENST00000507355 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
POLR2J3-212ENST00000507355 CD109Q6YHK3 1445 aa22.98■■□□□ 1.27
POLR2J3-212ENST00000507355 MAGI3Q5TCQ9 1506 aa22.96■■□□□ 1.27
POLR2J3-212ENST00000507355 KIF21BO75037 1637 aa22.94■■□□□ 1.26
POLR2J3-212ENST00000507355 ABCA8O94911 1581 aa22.93■■□□□ 1.26
POLR2J3-212ENST00000507355 GOLGA3Q08378 1498 aa22.91■■□□□ 1.26
POLR2J3-212ENST00000507355 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
POLR2J3-212ENST00000507355 ARAP3Q8WWN8 1544 aa22.79■■□□□ 1.24
POLR2J3-212ENST00000507355 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
POLR2J3-212ENST00000507355 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
POLR2J3-212ENST00000507355 ATP10BO94823 1461 aa22.73■■□□□ 1.23
POLR2J3-212ENST00000507355 PTPRMP28827 1452 aa22.73■■□□□ 1.23
POLR2J3-212ENST00000507355 ABCA9Q8IUA7 1624 aa22.72■■□□□ 1.23
POLR2J3-212ENST00000507355 FBXO41Q8TF61 875 aa22.72■■□□□ 1.23
POLR2J3-212ENST00000507355 ADAMTSL3P82987 1691 aa22.71■■□□□ 1.23
POLR2J3-212ENST00000507355 RAPGEF3O95398 923 aa22.69■■□□□ 1.22
POLR2J3-212ENST00000507355 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
POLR2J3-212ENST00000507355 CSRNP3Q8WYN3 585 aa22.65■■□□□ 1.22
POLR2J3-212ENST00000507355 PHLDB1Q86UU1 1377 aa22.64■■□□□ 1.22
POLR2J3-212ENST00000507355 MADDQ8WXG6 1647 aa22.64■■□□□ 1.22
POLR2J3-212ENST00000507355 BCORL1Q5H9F3 1711 aa22.64■■□□□ 1.21
POLR2J3-212ENST00000507355 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
POLR2J3-212ENST00000507355 ARID4BQ4LE39 1312 aaPredicted RBP22.63■■□□□ 1.21
POLR2J3-212ENST00000507355 NEO1Q92859 1461 aa22.62■■□□□ 1.21
POLR2J3-212ENST00000507355 RAPGEF6Q8TEU7 1601 aa22.62■■□□□ 1.21
POLR2J3-212ENST00000507355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
POLR2J3-212ENST00000507355 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
POLR2J3-212ENST00000507355 PCF11O94913 1555 aaKnown RBP22.61■■□□□ 1.21
POLR2J3-212ENST00000507355 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
POLR2J3-212ENST00000507355 LMTK3Q96Q04 1460 aa22.57■■□□□ 1.2
POLR2J3-212ENST00000507355 RIMS1Q86UR5 1692 aaKnown RBP22.57■■□□□ 1.2
POLR2J3-212ENST00000507355 ARHGEF40Q8TER5 1519 aa22.55■■□□□ 1.2
POLR2J3-212ENST00000507355 NUP153P49790 1475 aaKnown RBP22.53■■□□□ 1.2
POLR2J3-212ENST00000507355 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.2
POLR2J3-212ENST00000507355 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
POLR2J3-212ENST00000507355 RICTORQ6R327 1708 aa22.5■■□□□ 1.19
POLR2J3-212ENST00000507355 DENND4BO75064 1496 aaPredicted RBP22.48■■□□□ 1.19
POLR2J3-212ENST00000507355 HSPA2P54652 639 aa22.46■■□□□ 1.19
POLR2J3-212ENST00000507355 EEA1Q15075 1411 aa22.46■■□□□ 1.19
POLR2J3-212ENST00000507355 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
POLR2J3-212ENST00000507355 FANCAO15360 1455 aa22.44■■□□□ 1.18
POLR2J3-212ENST00000507355 AKNAQ7Z591 1439 aa22.44■■□□□ 1.18
POLR2J3-212ENST00000507355 CFAP74Q9C0B2 1584 aa22.44■■□□□ 1.18
POLR2J3-212ENST00000507355 SIGLEC1Q9BZZ2 1709 aa22.42■■□□□ 1.18
POLR2J3-212ENST00000507355 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
POLR2J3-212ENST00000507355 TTC37Q6PGP7 1564 aa22.41■■□□□ 1.18
POLR2J3-212ENST00000507355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
POLR2J3-212ENST00000507355 ZFYVE16Q7Z3T8 1539 aa22.4■■□□□ 1.18
POLR2J3-212ENST00000507355 POGZQ7Z3K3 1410 aa22.4■■□□□ 1.18
POLR2J3-212ENST00000507355 ZMYM4Q5VZL5 1548 aa22.38■■□□□ 1.17
POLR2J3-212ENST00000507355 YEATS2Q9ULM3 1422 aa22.38■■□□□ 1.17
POLR2J3-212ENST00000507355 EFCAB5A4FU69 1503 aa22.37■■□□□ 1.17
POLR2J3-212ENST00000507355 MLECQ14165 292 aa22.36■■□□□ 1.17
POLR2J3-212ENST00000507355 FER1L4A9Z1Z3 1794 aa22.35■■□□□ 1.17
POLR2J3-212ENST00000507355 HECW1Q76N89 1606 aa22.33■■□□□ 1.17
POLR2J3-212ENST00000507355 CDK13Q14004 1512 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms