RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 CHIC1Q5VXU3 224 aa32.42■■■□□ 2.78
LMNA-221ENST00000506981 CYB5RLQ6IPT4 315 aa32.42■■■□□ 2.78
LMNA-221ENST00000506981 EEA1Q15075 1411 aa32.39■■■□□ 2.78
LMNA-221ENST00000506981 ERCC6L2Q5T890 1561 aa32.39■■■□□ 2.78
LMNA-221ENST00000506981 JPH4Q96JJ6 628 aa32.35■■■□□ 2.77
LMNA-221ENST00000506981 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
LMNA-221ENST00000506981 CTTNBP2Q8WZ74 1663 aa32.34■■■□□ 2.77
LMNA-221ENST00000506981 IQGAP2Q13576 1575 aa32.33■■■□□ 2.77
LMNA-221ENST00000506981 PRXQ9BXM0 1461 aa32.29■■■□□ 2.76
LMNA-221ENST00000506981 CSRNP3Q8WYN3 585 aa32.26■■■□□ 2.75
LMNA-221ENST00000506981 FAM9AQ8IZU1 332 aaPredicted RBP32.18■■■□□ 2.74
LMNA-221ENST00000506981 CARMIL2Q6F5E8 1435 aa32.13■■■□□ 2.73
LMNA-221ENST00000506981 KIF21BO75037 1637 aa32.1■■■□□ 2.73
LMNA-221ENST00000506981 UGGT2Q9NYU1 1516 aa32.1■■■□□ 2.73
LMNA-221ENST00000506981 KIAA0556O60303 1618 aa32.01■■■□□ 2.72
LMNA-221ENST00000506981 DISP1Q96F81 1524 aa32■■■□□ 2.71
LMNA-221ENST00000506981 TNIKQ9UKE5 1360 aa31.98■■■□□ 2.71
LMNA-221ENST00000506981 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
LMNA-221ENST00000506981 PTPRGP23470 1445 aa31.95■■■□□ 2.71
LMNA-221ENST00000506981 TTBK1Q5TCY1 1321 aaPredicted RBP31.91■■■□□ 2.7
LMNA-221ENST00000506981 ADCY10Q96PN6 1610 aa31.9■■■□□ 2.7
LMNA-221ENST00000506981 TRHP20396 242 aaPredicted RBP31.82■■■□□ 2.68
LMNA-221ENST00000506981 NPM1P06748 294 aaKnown RBP eCLIP31.81■■■□□ 2.68
LMNA-221ENST00000506981 SAMD9Q5K651 1589 aa31.79■■■□□ 2.68
LMNA-221ENST00000506981 EHMT2Q96KQ7 1210 aa31.77■■■□□ 2.68
LMNA-221ENST00000506981 UBTFP17480 764 aaKnown RBP31.75■■■□□ 2.67
LMNA-221ENST00000506981 UACAQ9BZF9 1416 aa31.75■■■□□ 2.67
LMNA-221ENST00000506981 ABCC2Q92887 1545 aa31.74■■■□□ 2.67
LMNA-221ENST00000506981 UHRF1BP1LA0JNW5 1464 aa31.72■■■□□ 2.67
LMNA-221ENST00000506981 MAPKBP1O60336 1514 aa31.7■■■□□ 2.66
LMNA-221ENST00000506981 RANGAP1P46060 587 aaPredicted RBP31.68■■■□□ 2.66
LMNA-221ENST00000506981 EFCAB5A4FU69 1503 aa31.67■■■□□ 2.66
LMNA-221ENST00000506981 P3H3Q8IVL6 736 aa31.65■■■□□ 2.66
LMNA-221ENST00000506981 KIF13AQ9H1H9 1805 aa31.64■■■□□ 2.66
LMNA-221ENST00000506981 ABCA8O94911 1581 aa31.62■■■□□ 2.65
LMNA-221ENST00000506981 PLB1Q6P1J6 1458 aa31.61■■■□□ 2.65
LMNA-221ENST00000506981 ZCCHC11Q5TAX3 1644 aaKnown RBP31.6■■■□□ 2.65
LMNA-221ENST00000506981 KDM5BQ9UGL1 1544 aa31.56■■■□□ 2.64
LMNA-221ENST00000506981 FHOD3Q2V2M9 1422 aa31.55■■■□□ 2.64
LMNA-221ENST00000506981 RAPGEF6Q8TEU7 1601 aa31.53■■■□□ 2.64
LMNA-221ENST00000506981 DIP2BQ9P265 1576 aa31.52■■■□□ 2.64
LMNA-221ENST00000506981 ABCC10Q5T3U5 1492 aa31.51■■■□□ 2.63
LMNA-221ENST00000506981 ASXL2Q76L83 1435 aa31.48■■■□□ 2.63
LMNA-221ENST00000506981 ARHGAP35Q9NRY4 1499 aa31.42■■■□□ 2.62
LMNA-221ENST00000506981 FAM69CQ0P6D2 419 aa31.42■■■□□ 2.62
LMNA-221ENST00000506981 TSPOAP1O95153 1857 aa31.38■■■□□ 2.61
LMNA-221ENST00000506981 WDR7Q9Y4E6 1490 aa31.34■■■□□ 2.61
LMNA-221ENST00000506981 FMN1Q68DA7 1419 aa31.34■■■□□ 2.61
LMNA-221ENST00000506981 GLI2P10070 1586 aa31.33■■■□□ 2.61
LMNA-221ENST00000506981 ARID3CA6NKF2 412 aa31.31■■■□□ 2.6
LMNA-221ENST00000506981 ATP10BO94823 1461 aa31.31■■■□□ 2.6
LMNA-221ENST00000506981 NUP153P49790 1475 aaKnown RBP31.3■■■□□ 2.6
LMNA-221ENST00000506981 EPRSP07814 1512 aaKnown RBP31.29■■■□□ 2.6
LMNA-221ENST00000506981 HECW1Q76N89 1606 aa31.27■■■□□ 2.6
LMNA-221ENST00000506981 CLIP1P30622 1438 aa31.26■■■□□ 2.6
LMNA-221ENST00000506981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.24■■■□□ 2.59
LMNA-221ENST00000506981 HNRNPUL2Q1KMD3 747 aaKnown RBP31.24■■■□□ 2.59
LMNA-221ENST00000506981 MAP3K4Q9Y6R4 1608 aa31.23■■■□□ 2.59
LMNA-221ENST00000506981 CFAP43Q8NDM7 1665 aa31.19■■■□□ 2.58
LMNA-221ENST00000506981 PPRC1Q5VV67 1664 aaKnown RBP31.16■■■□□ 2.58
LMNA-221ENST00000506981 KCNH8Q96L42 1107 aa31.15■■■□□ 2.58
LMNA-221ENST00000506981 ATP1B4Q9UN42 357 aaPredicted RBP31.15■■■□□ 2.58
LMNA-221ENST00000506981 PCF11O94913 1555 aaKnown RBP31.13■■■□□ 2.57
LMNA-221ENST00000506981 CEP162Q5TB80 1403 aa31.12■■■□□ 2.57
LMNA-221ENST00000506981 CDK13Q14004 1512 aaKnown RBP31.12■■■□□ 2.57
LMNA-221ENST00000506981 LRRIQ1Q96JM4 1722 aa31.1■■■□□ 2.57
LMNA-221ENST00000506981 TEX14Q8IWB6 1497 aa31.08■■■□□ 2.57
LMNA-221ENST00000506981 KDM6BO15054 1643 aa31.07■■■□□ 2.56
LMNA-221ENST00000506981 LOC105371045A0A1W2PR82 267 aa31.07■■■□□ 2.56
LMNA-221ENST00000506981 ABCA9Q8IUA7 1624 aa31.06■■■□□ 2.56
LMNA-221ENST00000506981 PLEKHD1A6NEE1 506 aa31.06■■■□□ 2.56
LMNA-221ENST00000506981 CASKIN1Q8WXD9 1431 aa31.06■■■□□ 2.56
LMNA-221ENST00000506981 FYCO1Q9BQS8 1478 aa31.04■■■□□ 2.56
LMNA-221ENST00000506981 CD109Q6YHK3 1445 aa31.03■■■□□ 2.56
LMNA-221ENST00000506981 CCDC18Q5T9S5 1454 aa31.01■■■□□ 2.55
LMNA-221ENST00000506981 MAGI3Q5TCQ9 1506 aa30.98■■■□□ 2.55
LMNA-221ENST00000506981 CDK11AQ9UQ88 783 aaPredicted RBP30.97■■■□□ 2.55
LMNA-221ENST00000506981 KIF14Q15058 1648 aa30.9■■■□□ 2.54
LMNA-221ENST00000506981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.88■■■□□ 2.53
LMNA-221ENST00000506981 TTC37Q6PGP7 1564 aa30.88■■■□□ 2.53
LMNA-221ENST00000506981 TROQ12816 1431 aaPredicted RBP30.86■■■□□ 2.53
LMNA-221ENST00000506981 MYO5CQ9NQX4 1742 aa30.84■■■□□ 2.53
LMNA-221ENST00000506981 CFAP74Q9C0B2 1584 aa30.83■■■□□ 2.53
LMNA-221ENST00000506981 NEO1Q92859 1461 aa30.77■■■□□ 2.52
LMNA-221ENST00000506981 VPS8Q8N3P4 1428 aa30.75■■■□□ 2.51
LMNA-221ENST00000506981 PHLDB1Q86UU1 1377 aa30.75■■■□□ 2.51
LMNA-221ENST00000506981 COL17A1Q9UMD9 1497 aaPredicted RBP30.73■■■□□ 2.51
LMNA-221ENST00000506981 ARAP3Q8WWN8 1544 aa30.71■■■□□ 2.51
LMNA-221ENST00000506981 FANCAO15360 1455 aa30.7■■■□□ 2.51
LMNA-221ENST00000506981 PLCH2O75038 1416 aa30.66■■■□□ 2.5
LMNA-221ENST00000506981 MTUS2Q5JR59 1369 aa30.66■■■□□ 2.5
LMNA-221ENST00000506981 EHBP1L1Q8N3D4 1523 aa30.65■■■□□ 2.5
LMNA-221ENST00000506981 PREX2Q70Z35 1606 aa30.64■■■□□ 2.5
LMNA-221ENST00000506981 CDC42BPAQ5VT25 1732 aa30.64■■■□□ 2.5
LMNA-221ENST00000506981 CDC42BPBQ9Y5S2 1711 aa30.63■■■□□ 2.49
LMNA-221ENST00000506981 ARHGAP5Q13017 1502 aa30.63■■■□□ 2.49
LMNA-221ENST00000506981 AKNAQ7Z591 1439 aa30.62■■■□□ 2.49
LMNA-221ENST00000506981 TIAM1Q13009 1591 aa30.62■■■□□ 2.49
LMNA-221ENST00000506981 RICTORQ6R327 1708 aa30.58■■■□□ 2.49
LMNA-221ENST00000506981 EFCAB2Q5VUJ9 269 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms