RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
NDUFS4-204ENST00000506974 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
NDUFS4-204ENST00000506974 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.24
NDUFS4-204ENST00000506974 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
NDUFS4-204ENST00000506974 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
NDUFS4-204ENST00000506974 CUL7Q14999 1698 aa16.55■□□□□ 0.24
NDUFS4-204ENST00000506974 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
NDUFS4-204ENST00000506974 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
NDUFS4-204ENST00000506974 KIF21BO75037 1637 aa16.51■□□□□ 0.23
NDUFS4-204ENST00000506974 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
NDUFS4-204ENST00000506974 IGF1RP08069 1367 aa16.51■□□□□ 0.23
NDUFS4-204ENST00000506974 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
NDUFS4-204ENST00000506974 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
NDUFS4-204ENST00000506974 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
NDUFS4-204ENST00000506974 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
NDUFS4-204ENST00000506974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.227e-8■□□□□ 11.3
NDUFS4-204ENST00000506974 CHD1O14646 1710 aa16.42■□□□□ 0.22
NDUFS4-204ENST00000506974 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
NDUFS4-204ENST00000506974 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
NDUFS4-204ENST00000506974 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
NDUFS4-204ENST00000506974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
NDUFS4-204ENST00000506974 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
NDUFS4-204ENST00000506974 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
NDUFS4-204ENST00000506974 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
NDUFS4-204ENST00000506974 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
NDUFS4-204ENST00000506974 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
NDUFS4-204ENST00000506974 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
NDUFS4-204ENST00000506974 FBLN2P98095 1184 aa16.32■□□□□ 0.2
NDUFS4-204ENST00000506974 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
NDUFS4-204ENST00000506974 CEP170Q5SW79 1584 aa16.29■□□□□ 0.2
NDUFS4-204ENST00000506974 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
NDUFS4-204ENST00000506974 NUP160Q12769 1436 aa16.25■□□□□ 0.19
NDUFS4-204ENST00000506974 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
NDUFS4-204ENST00000506974 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
NDUFS4-204ENST00000506974 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
NDUFS4-204ENST00000506974 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
NDUFS4-204ENST00000506974 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
NDUFS4-204ENST00000506974 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
NDUFS4-204ENST00000506974 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
NDUFS4-204ENST00000506974 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
NDUFS4-204ENST00000506974 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
NDUFS4-204ENST00000506974 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
NDUFS4-204ENST00000506974 SHROOM2Q13796 1616 aa16.15■□□□□ 0.18
NDUFS4-204ENST00000506974 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
NDUFS4-204ENST00000506974 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
NDUFS4-204ENST00000506974 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
NDUFS4-204ENST00000506974 APLP2Q06481 763 aa16.1■□□□□ 0.17
NDUFS4-204ENST00000506974 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
NDUFS4-204ENST00000506974 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
NDUFS4-204ENST00000506974 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
NDUFS4-204ENST00000506974 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
NDUFS4-204ENST00000506974 ARHGAP35Q9NRY4 1499 aa16.06■□□□□ 0.16
NDUFS4-204ENST00000506974 CLIP1P30622 1438 aa16.06■□□□□ 0.16
NDUFS4-204ENST00000506974 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
NDUFS4-204ENST00000506974 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
NDUFS4-204ENST00000506974 FKBP8Q14318 412 aa16.01■□□□□ 0.15
NDUFS4-204ENST00000506974 JPH4Q96JJ6 628 aa16.01■□□□□ 0.15
NDUFS4-204ENST00000506974 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
NDUFS4-204ENST00000506974 RANGAP1P46060 587 aaPredicted RBP15.97■□□□□ 0.15
NDUFS4-204ENST00000506974 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
NDUFS4-204ENST00000506974 FHOD3Q2V2M9 1422 aa15.95■□□□□ 0.14
NDUFS4-204ENST00000506974 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
NDUFS4-204ENST00000506974 PCF11O94913 1555 aaKnown RBP15.9■□□□□ 0.14
NDUFS4-204ENST00000506974 LRRIQ1Q96JM4 1722 aa15.9■□□□□ 0.14
NDUFS4-204ENST00000506974 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
NDUFS4-204ENST00000506974 P3H3Q8IVL6 736 aa15.89■□□□□ 0.13
NDUFS4-204ENST00000506974 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
NDUFS4-204ENST00000506974 FMN1Q68DA7 1419 aa15.86■□□□□ 0.13
NDUFS4-204ENST00000506974 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
NDUFS4-204ENST00000506974 ABCA8O94911 1581 aa15.85■□□□□ 0.13
NDUFS4-204ENST00000506974 FYCO1Q9BQS8 1478 aa15.83■□□□□ 0.12
NDUFS4-204ENST00000506974 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
NDUFS4-204ENST00000506974 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
NDUFS4-204ENST00000506974 PTPRGP23470 1445 aa15.81■□□□□ 0.12
NDUFS4-204ENST00000506974 CFAP43Q8NDM7 1665 aa15.81■□□□□ 0.12
NDUFS4-204ENST00000506974 PLB1Q6P1J6 1458 aa15.8■□□□□ 0.12
NDUFS4-204ENST00000506974 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
NDUFS4-204ENST00000506974 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
NDUFS4-204ENST00000506974 ADCY10Q96PN6 1610 aa15.77■□□□□ 0.12
NDUFS4-204ENST00000506974 ABCC2Q92887 1545 aa15.77■□□□□ 0.11
NDUFS4-204ENST00000506974 NUP153P49790 1475 aaKnown RBP15.76■□□□□ 0.11
NDUFS4-204ENST00000506974 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
NDUFS4-204ENST00000506974 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
NDUFS4-204ENST00000506974 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
NDUFS4-204ENST00000506974 UACAQ9BZF9 1416 aa15.74■□□□□ 0.11
NDUFS4-204ENST00000506974 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
NDUFS4-204ENST00000506974 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
NDUFS4-204ENST00000506974 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
NDUFS4-204ENST00000506974 EPRSP07814 1512 aaKnown RBP15.72■□□□□ 0.11
NDUFS4-204ENST00000506974 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
NDUFS4-204ENST00000506974 ZCCHC11Q5TAX3 1644 aaKnown RBP15.71■□□□□ 0.11
NDUFS4-204ENST00000506974 CDK13Q14004 1512 aaKnown RBP15.7■□□□□ 0.1
NDUFS4-204ENST00000506974 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
NDUFS4-204ENST00000506974 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
NDUFS4-204ENST00000506974 ATP10BO94823 1461 aa15.66■□□□□ 0.1
NDUFS4-204ENST00000506974 MAGI3Q5TCQ9 1506 aa15.66■□□□□ 0.1
NDUFS4-204ENST00000506974 MAPKBP1O60336 1514 aa15.65■□□□□ 0.1
NDUFS4-204ENST00000506974 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
NDUFS4-204ENST00000506974 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
NDUFS4-204ENST00000506974 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms