RNA–Protein interactions for RNA: ENST00000506873.5

KLHL3-208, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,883 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-208ENST00000506873 CLIP1P30622 1438 aa23.46■■□□□ 1.35
KLHL3-208ENST00000506873 NUP160Q12769 1436 aa23.41■■□□□ 1.34
KLHL3-208ENST00000506873 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
KLHL3-208ENST00000506873 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
KLHL3-208ENST00000506873 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
KLHL3-208ENST00000506873 CHD1O14646 1710 aa23.36■■□□□ 1.33
KLHL3-208ENST00000506873 CTTNBP2Q8WZ74 1663 aa23.35■■□□□ 1.33
KLHL3-208ENST00000506873 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
KLHL3-208ENST00000506873 ARHGAP35Q9NRY4 1499 aa23.33■■□□□ 1.33
KLHL3-208ENST00000506873 IQGAP2Q13576 1575 aa23.32■■□□□ 1.32
KLHL3-208ENST00000506873 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
KLHL3-208ENST00000506873 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
KLHL3-208ENST00000506873 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
KLHL3-208ENST00000506873 FHOD3Q2V2M9 1422 aa23.22■■□□□ 1.31
KLHL3-208ENST00000506873 EFCAB5A4FU69 1503 aa23.2■■□□□ 1.3
KLHL3-208ENST00000506873 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
KLHL3-208ENST00000506873 VPS8Q8N3P4 1428 aa23.17■■□□□ 1.3
KLHL3-208ENST00000506873 SAMD9Q5K651 1589 aa23.16■■□□□ 1.3
KLHL3-208ENST00000506873 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
KLHL3-208ENST00000506873 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
KLHL3-208ENST00000506873 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
KLHL3-208ENST00000506873 CARMIL2Q6F5E8 1435 aa23.13■■□□□ 1.29
KLHL3-208ENST00000506873 KIAA0556O60303 1618 aa23.08■■□□□ 1.28
KLHL3-208ENST00000506873 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
KLHL3-208ENST00000506873 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
KLHL3-208ENST00000506873 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
KLHL3-208ENST00000506873 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
KLHL3-208ENST00000506873 ERCC6L2Q5T890 1561 aa23.02■■□□□ 1.27
KLHL3-208ENST00000506873 APLP2Q06481 763 aa23■■□□□ 1.27
KLHL3-208ENST00000506873 PTPRGP23470 1445 aa22.99■■□□□ 1.27
KLHL3-208ENST00000506873 CASKIN1Q8WXD9 1431 aa22.97■■□□□ 1.27
KLHL3-208ENST00000506873 PCF11O94913 1555 aaKnown RBP22.92■■□□□ 1.26
KLHL3-208ENST00000506873 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
KLHL3-208ENST00000506873 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
KLHL3-208ENST00000506873 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
KLHL3-208ENST00000506873 FYCO1Q9BQS8 1478 aa22.91■■□□□ 1.26
KLHL3-208ENST00000506873 NUP153P49790 1475 aaKnown RBP22.82■■□□□ 1.24
KLHL3-208ENST00000506873 UACAQ9BZF9 1416 aa22.81■■□□□ 1.24
KLHL3-208ENST00000506873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.81■■□□□ 1.24
KLHL3-208ENST00000506873 HNRNPUL2Q1KMD3 747 aaKnown RBP22.81■■□□□ 1.24
KLHL3-208ENST00000506873 RAPGEF6Q8TEU7 1601 aa22.8■■□□□ 1.24
KLHL3-208ENST00000506873 ABCA8O94911 1581 aa22.8■■□□□ 1.24
KLHL3-208ENST00000506873 EPRSP07814 1512 aaKnown RBP22.79■■□□□ 1.24
KLHL3-208ENST00000506873 MAP3K1Q13233 1512 aa22.78■■□□□ 1.24
KLHL3-208ENST00000506873 ARHGEF11O15085 1522 aa22.78■■□□□ 1.24
KLHL3-208ENST00000506873 TIAM1Q13009 1591 aa22.77■■□□□ 1.24
KLHL3-208ENST00000506873 HECW1Q76N89 1606 aa22.77■■□□□ 1.24
KLHL3-208ENST00000506873 CDK13Q14004 1512 aaKnown RBP22.75■■□□□ 1.23
KLHL3-208ENST00000506873 LRRC9Q6ZRR7 1453 aa22.74■■□□□ 1.23
KLHL3-208ENST00000506873 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
KLHL3-208ENST00000506873 LRRIQ1Q96JM4 1722 aa22.73■■□□□ 1.23
KLHL3-208ENST00000506873 CYB5RLQ6IPT4 315 aa22.73■■□□□ 1.23
KLHL3-208ENST00000506873 ATP10BO94823 1461 aa22.72■■□□□ 1.23
KLHL3-208ENST00000506873 MTUS2Q5JR59 1369 aa22.7■■□□□ 1.22
KLHL3-208ENST00000506873 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
KLHL3-208ENST00000506873 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
KLHL3-208ENST00000506873 UHRF1BP1LA0JNW5 1464 aa22.67■■□□□ 1.22
KLHL3-208ENST00000506873 PLEKHD1A6NEE1 506 aa22.66■■□□□ 1.22
KLHL3-208ENST00000506873 CFAP43Q8NDM7 1665 aa22.66■■□□□ 1.22
KLHL3-208ENST00000506873 TRIM26Q12899 539 aaPredicted RBP22.65■■□□□ 1.22
KLHL3-208ENST00000506873 RIMBP3CA6NJZ7 1639 aa22.65■■□□□ 1.22
KLHL3-208ENST00000506873 RIMBP3BA6NNM3 1639 aa22.65■■□□□ 1.22
KLHL3-208ENST00000506873 RIMBP3Q9UFD9 1639 aa22.65■■□□□ 1.22
KLHL3-208ENST00000506873 MAGI3Q5TCQ9 1506 aa22.64■■□□□ 1.22
KLHL3-208ENST00000506873 ADCY10Q96PN6 1610 aa22.6■■□□□ 1.21
KLHL3-208ENST00000506873 KDM5BQ9UGL1 1544 aa22.59■■□□□ 1.21
KLHL3-208ENST00000506873 PCGF6Q9BYE7 350 aa22.59■■□□□ 1.21
KLHL3-208ENST00000506873 NPM1P06748 294 aaKnown RBP eCLIP22.57■■□□□ 1.2
KLHL3-208ENST00000506873 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
KLHL3-208ENST00000506873 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
KLHL3-208ENST00000506873 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
KLHL3-208ENST00000506873 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
KLHL3-208ENST00000506873 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
KLHL3-208ENST00000506873 ZCCHC11Q5TAX3 1644 aaKnown RBP22.5■■□□□ 1.19
KLHL3-208ENST00000506873 DNAJC5Q9H3Z4 198 aa22.49■■□□□ 1.19
KLHL3-208ENST00000506873 SUPT6HQ7KZ85 1726 aaKnown RBP22.45■■□□□ 1.18
KLHL3-208ENST00000506873 ASXL2Q76L83 1435 aa22.43■■□□□ 1.18
KLHL3-208ENST00000506873 CCNB3Q8WWL7 1395 aa22.42■■□□□ 1.18
KLHL3-208ENST00000506873 RRBP1Q9P2E9 1410 aaKnown RBP22.41■■□□□ 1.18
KLHL3-208ENST00000506873 KIF14Q15058 1648 aa22.41■■□□□ 1.18
KLHL3-208ENST00000506873 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
KLHL3-208ENST00000506873 WDR7Q9Y4E6 1490 aa22.4■■□□□ 1.18
KLHL3-208ENST00000506873 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.18
KLHL3-208ENST00000506873 FGD6Q6ZV73 1430 aa22.38■■□□□ 1.17
KLHL3-208ENST00000506873 ABCC10Q5T3U5 1492 aa22.37■■□□□ 1.17
KLHL3-208ENST00000506873 CFDP1Q9UEE9 299 aaPredicted RBP22.37■■□□□ 1.17
KLHL3-208ENST00000506873 GPATCH8Q9UKJ3 1502 aaKnown RBP22.36■■□□□ 1.17
KLHL3-208ENST00000506873 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
KLHL3-208ENST00000506873 ITGAEP38570 1179 aa22.32■■□□□ 1.16
KLHL3-208ENST00000506873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.32■■□□□ 1.16
KLHL3-208ENST00000506873 ZNF777Q9ULD5 760 aaPredicted RBP22.32■■□□□ 1.16
KLHL3-208ENST00000506873 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
KLHL3-208ENST00000506873 MAPKBP1O60336 1514 aa22.27■■□□□ 1.16
KLHL3-208ENST00000506873 TTC37Q6PGP7 1564 aa22.27■■□□□ 1.16
KLHL3-208ENST00000506873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.26■■□□□ 1.15
KLHL3-208ENST00000506873 PLCH2O75038 1416 aa22.24■■□□□ 1.15
KLHL3-208ENST00000506873 PTPN23Q9H3S7 1636 aa22.22■■□□□ 1.15
KLHL3-208ENST00000506873 TCOF1Q13428 1488 aaKnown RBP22.21■■□□□ 1.15
KLHL3-208ENST00000506873 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
KLHL3-208ENST00000506873 EFCAB2Q5VUJ9 269 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms