RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
NR1I3-222ENST00000506018 CUL7Q14999 1698 aa17.98■□□□□ 0.47
NR1I3-222ENST00000506018 ERCC6L2Q5T890 1561 aa17.93■□□□□ 0.46
NR1I3-222ENST00000506018 RUSC2Q8N2Y8 1516 aa17.92■□□□□ 0.46
NR1I3-222ENST00000506018 IGF1RP08069 1367 aa17.91■□□□□ 0.46
NR1I3-222ENST00000506018 JPH4Q96JJ6 628 aa17.9■□□□□ 0.46
NR1I3-222ENST00000506018 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.45
NR1I3-222ENST00000506018 KIAA0586Q9BVV6 1533 aa17.85■□□□□ 0.45
NR1I3-222ENST00000506018 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
NR1I3-222ENST00000506018 FOXD1Q16676 465 aa17.79■□□□□ 0.44
NR1I3-222ENST00000506018 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
NR1I3-222ENST00000506018 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
NR1I3-222ENST00000506018 CARMIL2Q6F5E8 1435 aa17.72■□□□□ 0.43
NR1I3-222ENST00000506018 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
NR1I3-222ENST00000506018 ADCY10Q96PN6 1610 aa17.66■□□□□ 0.42
NR1I3-222ENST00000506018 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
NR1I3-222ENST00000506018 PTPRGP23470 1445 aa17.65■□□□□ 0.42
NR1I3-222ENST00000506018 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.42
NR1I3-222ENST00000506018 MAPKBP1O60336 1514 aa17.64■□□□□ 0.41
NR1I3-222ENST00000506018 CTTNBP2Q8WZ74 1663 aa17.63■□□□□ 0.41
NR1I3-222ENST00000506018 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
NR1I3-222ENST00000506018 UGGT2Q9NYU1 1516 aa17.59■□□□□ 0.41
NR1I3-222ENST00000506018 ABCC10Q5T3U5 1492 aa17.58■□□□□ 0.4
NR1I3-222ENST00000506018 FAM69CQ0P6D2 419 aa17.56■□□□□ 0.4
NR1I3-222ENST00000506018 DISP1Q96F81 1524 aa17.56■□□□□ 0.4
NR1I3-222ENST00000506018 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
NR1I3-222ENST00000506018 DIP2BQ9P265 1576 aa17.54■□□□□ 0.4
NR1I3-222ENST00000506018 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
NR1I3-222ENST00000506018 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
NR1I3-222ENST00000506018 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
NR1I3-222ENST00000506018 UACAQ9BZF9 1416 aa17.52■□□□□ 0.4
NR1I3-222ENST00000506018 UHRF1BP1LA0JNW5 1464 aa17.52■□□□□ 0.4
NR1I3-222ENST00000506018 EEA1Q15075 1411 aa17.49■□□□□ 0.39
NR1I3-222ENST00000506018 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
NR1I3-222ENST00000506018 PLB1Q6P1J6 1458 aa17.47■□□□□ 0.39
NR1I3-222ENST00000506018 TSPOAP1O95153 1857 aa17.47■□□□□ 0.39
NR1I3-222ENST00000506018 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
NR1I3-222ENST00000506018 ASXL2Q76L83 1435 aa17.44■□□□□ 0.38
NR1I3-222ENST00000506018 KDM5BQ9UGL1 1544 aa17.43■□□□□ 0.38
NR1I3-222ENST00000506018 ZCCHC11Q5TAX3 1644 aaKnown RBP17.42■□□□□ 0.38
NR1I3-222ENST00000506018 GLI2P10070 1586 aa17.4■□□□□ 0.38
NR1I3-222ENST00000506018 KDM6BO15054 1643 aa17.39■□□□□ 0.37
NR1I3-222ENST00000506018 ABCA8O94911 1581 aa17.36■□□□□ 0.37
NR1I3-222ENST00000506018 EPRSP07814 1512 aaKnown RBP17.33■□□□□ 0.37
NR1I3-222ENST00000506018 WDR7Q9Y4E6 1490 aa17.32■□□□□ 0.36
NR1I3-222ENST00000506018 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
NR1I3-222ENST00000506018 KIF21BO75037 1637 aa17.31■□□□□ 0.36
NR1I3-222ENST00000506018 MAP3K4Q9Y6R4 1608 aa17.31■□□□□ 0.36
NR1I3-222ENST00000506018 TEX14Q8IWB6 1497 aa17.31■□□□□ 0.36
NR1I3-222ENST00000506018 PPRC1Q5VV67 1664 aaKnown RBP17.3■□□□□ 0.36
NR1I3-222ENST00000506018 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
NR1I3-222ENST00000506018 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
NR1I3-222ENST00000506018 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
NR1I3-222ENST00000506018 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
NR1I3-222ENST00000506018 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
NR1I3-222ENST00000506018 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
NR1I3-222ENST00000506018 CD109Q6YHK3 1445 aa17.2■□□□□ 0.34
NR1I3-222ENST00000506018 ATP10BO94823 1461 aa17.19■□□□□ 0.34
NR1I3-222ENST00000506018 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
NR1I3-222ENST00000506018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
NR1I3-222ENST00000506018 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
NR1I3-222ENST00000506018 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
NR1I3-222ENST00000506018 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
NR1I3-222ENST00000506018 MAGI3Q5TCQ9 1506 aa17.17■□□□□ 0.34
NR1I3-222ENST00000506018 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
NR1I3-222ENST00000506018 ADRA2BP18089 450 aa17.13■□□□□ 0.33
NR1I3-222ENST00000506018 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
NR1I3-222ENST00000506018 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
NR1I3-222ENST00000506018 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
NR1I3-222ENST00000506018 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
NR1I3-222ENST00000506018 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.32
NR1I3-222ENST00000506018 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.32
NR1I3-222ENST00000506018 FMN1Q68DA7 1419 aa17.07■□□□□ 0.32
NR1I3-222ENST00000506018 HECW1Q76N89 1606 aa17.04■□□□□ 0.32
NR1I3-222ENST00000506018 ARAP3Q8WWN8 1544 aa17.03■□□□□ 0.32
NR1I3-222ENST00000506018 KDM4FA0A1W2PPD8 638 aa17.02■□□□□ 0.32
NR1I3-222ENST00000506018 NEO1Q92859 1461 aa17.02■□□□□ 0.31
NR1I3-222ENST00000506018 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.31
NR1I3-222ENST00000506018 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
NR1I3-222ENST00000506018 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
NR1I3-222ENST00000506018 ADGRL1O94910 1474 aa17■□□□□ 0.31
NR1I3-222ENST00000506018 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
NR1I3-222ENST00000506018 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
NR1I3-222ENST00000506018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.96■□□□□ 0.3
NR1I3-222ENST00000506018 TTC37Q6PGP7 1564 aa16.93■□□□□ 0.3
NR1I3-222ENST00000506018 FANCAO15360 1455 aa16.92■□□□□ 0.3
NR1I3-222ENST00000506018 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
NR1I3-222ENST00000506018 CLIP1P30622 1438 aa16.9■□□□□ 0.3
NR1I3-222ENST00000506018 AKNAQ7Z591 1439 aa16.9■□□□□ 0.3
NR1I3-222ENST00000506018 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
NR1I3-222ENST00000506018 RAPGEF3O95398 923 aa16.89■□□□□ 0.3
NR1I3-222ENST00000506018 KIF14Q15058 1648 aa16.89■□□□□ 0.29
NR1I3-222ENST00000506018 CCDC18Q5T9S5 1454 aa16.88■□□□□ 0.29
NR1I3-222ENST00000506018 RICTORQ6R327 1708 aa16.87■□□□□ 0.29
NR1I3-222ENST00000506018 FRMPD1Q5SYB0 1578 aa16.87■□□□□ 0.29
NR1I3-222ENST00000506018 LRRIQ1Q96JM4 1722 aa16.87■□□□□ 0.29
NR1I3-222ENST00000506018 PLCH2O75038 1416 aa16.86■□□□□ 0.29
NR1I3-222ENST00000506018 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
NR1I3-222ENST00000506018 CASKIN1Q8WXD9 1431 aa16.86■□□□□ 0.29
NR1I3-222ENST00000506018 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms