RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 WDR62O43379 1518 aa31.68■■■□□ 2.66
TTC39B-204ENST00000505732 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.66
TTC39B-204ENST00000505732 FHAD1B1AJZ9 1412 aa31.67■■■□□ 2.66
TTC39B-204ENST00000505732 EFCAB5A4FU69 1503 aa31.66■■■□□ 2.66
TTC39B-204ENST00000505732 FHOD3Q2V2M9 1422 aa31.64■■■□□ 2.66
TTC39B-204ENST00000505732 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
TTC39B-204ENST00000505732 IFT140Q96RY7 1462 aa31.62■■■□□ 2.65
TTC39B-204ENST00000505732 MAP3K1Q13233 1512 aa31.62■■■□□ 2.65
TTC39B-204ENST00000505732 PBRM1Q86U86 1689 aa31.58■■■□□ 2.65
TTC39B-204ENST00000505732 TIAM1Q13009 1591 aa31.58■■■□□ 2.65
TTC39B-204ENST00000505732 GRIN2BQ13224 1484 aa31.55■■■□□ 2.64
TTC39B-204ENST00000505732 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
TTC39B-204ENST00000505732 PCF11O94913 1555 aaKnown RBP31.53■■■□□ 2.64
TTC39B-204ENST00000505732 RRBP1Q9P2E9 1410 aaKnown RBP31.52■■■□□ 2.64
TTC39B-204ENST00000505732 ATP1B4Q9UN42 357 aaPredicted RBP31.5■■■□□ 2.63
TTC39B-204ENST00000505732 ADAMTS12P58397 1594 aa31.48■■■□□ 2.63
TTC39B-204ENST00000505732 LRRC9Q6ZRR7 1453 aa31.48■■■□□ 2.63
TTC39B-204ENST00000505732 CASKIN1Q8WXD9 1431 aa31.47■■■□□ 2.63
TTC39B-204ENST00000505732 FYCO1Q9BQS8 1478 aa31.46■■■□□ 2.63
TTC39B-204ENST00000505732 FMN1Q68DA7 1419 aa31.46■■■□□ 2.63
TTC39B-204ENST00000505732 SAMD9Q5K651 1589 aa31.45■■■□□ 2.62
TTC39B-204ENST00000505732 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
TTC39B-204ENST00000505732 CCNB3Q8WWL7 1395 aa31.42■■■□□ 2.62
TTC39B-204ENST00000505732 CFAP43Q8NDM7 1665 aa31.39■■■□□ 2.62
TTC39B-204ENST00000505732 SNAPC4Q5SXM2 1469 aa31.35■■■□□ 2.61
TTC39B-204ENST00000505732 EIF4G3O43432 1585 aaKnown RBP31.32■■■□□ 2.6
TTC39B-204ENST00000505732 PHLDB1Q86UU1 1377 aa31.3■■■□□ 2.6
TTC39B-204ENST00000505732 IQGAP2Q13576 1575 aa31.3■■■□□ 2.6
TTC39B-204ENST00000505732 ITGAEP38570 1179 aa31.21■■■□□ 2.59
TTC39B-204ENST00000505732 GRIN2AQ12879 1464 aa31.19■■■□□ 2.58
TTC39B-204ENST00000505732 KIAA0586Q9BVV6 1533 aa31.17■■■□□ 2.58
TTC39B-204ENST00000505732 MAGI1Q96QZ7 1491 aaPredicted RBP31.17■■■□□ 2.58
TTC39B-204ENST00000505732 UGGT2Q9NYU1 1516 aa31.16■■■□□ 2.58
TTC39B-204ENST00000505732 MTUS2Q5JR59 1369 aa31.13■■■□□ 2.57
TTC39B-204ENST00000505732 CHMP7Q8WUX9 453 aaPredicted RBP31.12■■■□□ 2.57
TTC39B-204ENST00000505732 FAM50AQ14320 339 aaKnown RBP31.11■■■□□ 2.57
TTC39B-204ENST00000505732 LRRIQ1Q96JM4 1722 aa31.11■■■□□ 2.57
TTC39B-204ENST00000505732 DHX57Q6P158 1386 aaKnown RBP31.09■■■□□ 2.57
TTC39B-204ENST00000505732 SYNJ2O15056 1496 aa31.09■■■□□ 2.57
TTC39B-204ENST00000505732 FBLN2P98095 1184 aa31.03■■■□□ 2.56
TTC39B-204ENST00000505732 CLSPNQ9HAW4 1339 aa31.02■■■□□ 2.56
TTC39B-204ENST00000505732 DISP1Q96F81 1524 aa31.01■■■□□ 2.56
TTC39B-204ENST00000505732 CCDC18Q5T9S5 1454 aa31.01■■■□□ 2.56
TTC39B-204ENST00000505732 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31■■■□□ 2.55
TTC39B-204ENST00000505732 HECW1Q76N89 1606 aa30.99■■■□□ 2.55
TTC39B-204ENST00000505732 KIAA0556O60303 1618 aa30.97■■■□□ 2.55
TTC39B-204ENST00000505732 CEP170Q5SW79 1584 aa30.97■■■□□ 2.55
TTC39B-204ENST00000505732 FGD6Q6ZV73 1430 aa30.97■■■□□ 2.55
TTC39B-204ENST00000505732 EHBP1L1Q8N3D4 1523 aa30.96■■■□□ 2.55
TTC39B-204ENST00000505732 RAB3GAP2Q9H2M9 1393 aa30.96■■■□□ 2.55
TTC39B-204ENST00000505732 NCOA2Q15596 1464 aa30.95■■■□□ 2.55
TTC39B-204ENST00000505732 EPRSP07814 1512 aaKnown RBP30.95■■■□□ 2.55
TTC39B-204ENST00000505732 SETD5Q9C0A6 1442 aa30.93■■■□□ 2.54
TTC39B-204ENST00000505732 MAGI3Q5TCQ9 1506 aa30.92■■■□□ 2.54
TTC39B-204ENST00000505732 NUP160Q12769 1436 aa30.91■■■□□ 2.54
TTC39B-204ENST00000505732 SUPT6HQ7KZ85 1726 aaKnown RBP30.9■■■□□ 2.54
TTC39B-204ENST00000505732 MYOM3Q5VTT5 1437 aa30.88■■■□□ 2.53
TTC39B-204ENST00000505732 CDK13Q14004 1512 aaKnown RBP30.87■■■□□ 2.53
TTC39B-204ENST00000505732 ARID3CA6NKF2 412 aa30.85■■■□□ 2.53
TTC39B-204ENST00000505732 JPH4Q96JJ6 628 aa30.84■■■□□ 2.53
TTC39B-204ENST00000505732 ARHGEF11O15085 1522 aa30.84■■■□□ 2.53
TTC39B-204ENST00000505732 ZNF316A6NFI3 1004 aaPredicted RBP30.79■■■□□ 2.52
TTC39B-204ENST00000505732 NUP153P49790 1475 aaKnown RBP30.77■■■□□ 2.52
TTC39B-204ENST00000505732 CARMIL2Q6F5E8 1435 aa30.76■■■□□ 2.52
TTC39B-204ENST00000505732 RAPGEF6Q8TEU7 1601 aa30.75■■■□□ 2.51
TTC39B-204ENST00000505732 PTPRKQ15262 1439 aa30.72■■■□□ 2.51
TTC39B-204ENST00000505732 DIEXFQ68CQ4 756 aaKnown RBP30.71■■■□□ 2.51
TTC39B-204ENST00000505732 PTPN23Q9H3S7 1636 aa30.69■■■□□ 2.5
TTC39B-204ENST00000505732 PLB1Q6P1J6 1458 aa30.67■■■□□ 2.5
TTC39B-204ENST00000505732 MAPKBP1O60336 1514 aa30.66■■■□□ 2.5
TTC39B-204ENST00000505732 CDK11AQ9UQ88 783 aaPredicted RBP30.65■■■□□ 2.5
TTC39B-204ENST00000505732 TCOF1Q13428 1488 aaKnown RBP30.65■■■□□ 2.5
TTC39B-204ENST00000505732 MIA2Q96PC5 1412 aa30.62■■■□□ 2.49
TTC39B-204ENST00000505732 HFM1A2PYH4 1435 aa30.62■■■□□ 2.49
TTC39B-204ENST00000505732 NAIPQ13075 1403 aa30.54■■■□□ 2.48
TTC39B-204ENST00000505732 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
TTC39B-204ENST00000505732 TROQ12816 1431 aaPredicted RBP30.52■■■□□ 2.48
TTC39B-204ENST00000505732 CHD1O14646 1710 aa30.5■■■□□ 2.47
TTC39B-204ENST00000505732 CHIC2Q9UKJ5 165 aa30.48■■■□□ 2.47
TTC39B-204ENST00000505732 ABCA8O94911 1581 aa30.48■■■□□ 2.47
TTC39B-204ENST00000505732 SIN3AQ96ST3 1273 aa30.46■■■□□ 2.47
TTC39B-204ENST00000505732 RRP7BPQ9NSQ0 103 aa30.45■■■□□ 2.47
TTC39B-204ENST00000505732 PTPRGP23470 1445 aa30.43■■■□□ 2.46
TTC39B-204ENST00000505732 UACAQ9BZF9 1416 aa30.43■■■□□ 2.46
TTC39B-204ENST00000505732 NEUROD1Q13562 356 aa30.41■■■□□ 2.46
TTC39B-204ENST00000505732 ZNF644Q9H582 1327 aaPredicted RBP30.4■■■□□ 2.46
TTC39B-204ENST00000505732 ATP10BO94823 1461 aa30.4■■■□□ 2.46
TTC39B-204ENST00000505732 AKNAQ7Z591 1439 aa30.38■■■□□ 2.45
TTC39B-204ENST00000505732 PLEKHD1A6NEE1 506 aa30.38■■■□□ 2.45
TTC39B-204ENST00000505732 DAPK1P53355 1430 aa30.35■■■□□ 2.45
TTC39B-204ENST00000505732 ADCY10Q96PN6 1610 aa30.34■■■□□ 2.45
TTC39B-204ENST00000505732 CFDP1Q9UEE9 299 aaPredicted RBP30.34■■■□□ 2.45
TTC39B-204ENST00000505732 KIF14Q15058 1648 aa30.34■■■□□ 2.45
TTC39B-204ENST00000505732 GPATCH8Q9UKJ3 1502 aaKnown RBP30.34■■■□□ 2.45
TTC39B-204ENST00000505732 TIMELESSQ9UNS1 1208 aa30.33■■■□□ 2.45
TTC39B-204ENST00000505732 ABCC5O15440 1437 aa30.32■■■□□ 2.44
TTC39B-204ENST00000505732 SHROOM2Q13796 1616 aa30.32■■■□□ 2.44
TTC39B-204ENST00000505732 GCC2Q8IWJ2 1684 aa30.31■■■□□ 2.44
TTC39B-204ENST00000505732 DNMT1P26358 1616 aaKnown RBP30.28■■■□□ 2.44
TTC39B-204ENST00000505732 ROCK1Q13464 1354 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 232.7 ms