RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
LIN54-204ENST00000505397 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
LIN54-204ENST00000505397 DIEXFQ68CQ4 756 aaKnown RBP25.48■■□□□ 1.67
LIN54-204ENST00000505397 THOC2Q8NI27 1593 aaKnown RBP25.46■■□□□ 1.67
LIN54-204ENST00000505397 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.66
LIN54-204ENST00000505397 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
LIN54-204ENST00000505397 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
LIN54-204ENST00000505397 ADAMTS12P58397 1594 aa25.33■■□□□ 1.65
LIN54-204ENST00000505397 EFCAB5A4FU69 1503 aa25.33■■□□□ 1.65
LIN54-204ENST00000505397 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
LIN54-204ENST00000505397 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
LIN54-204ENST00000505397 ZNF316A6NFI3 1004 aaPredicted RBP25.32■■□□□ 1.64
LIN54-204ENST00000505397 HNRNPUL2Q1KMD3 747 aaKnown RBP25.31■■□□□ 1.64
LIN54-204ENST00000505397 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
LIN54-204ENST00000505397 NEUROD1Q13562 356 aa25.27■■□□□ 1.64
LIN54-204ENST00000505397 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
LIN54-204ENST00000505397 FHOD3Q2V2M9 1422 aa25.2■■□□□ 1.62
LIN54-204ENST00000505397 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
LIN54-204ENST00000505397 SNAPC4Q5SXM2 1469 aa25.18■■□□□ 1.62
LIN54-204ENST00000505397 SAMD9Q5K651 1589 aa25.17■■□□□ 1.62
LIN54-204ENST00000505397 CENPBP07199 599 aaPredicted RBP25.16■■□□□ 1.62
LIN54-204ENST00000505397 PCF11O94913 1555 aaKnown RBP25.16■■□□□ 1.62
LIN54-204ENST00000505397 TIAM1Q13009 1591 aa25.13■■□□□ 1.61
LIN54-204ENST00000505397 IQGAP2Q13576 1575 aa25.13■■□□□ 1.61
LIN54-204ENST00000505397 MAP3K1Q13233 1512 aa25.13■■□□□ 1.61
LIN54-204ENST00000505397 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
LIN54-204ENST00000505397 FMN1Q68DA7 1419 aa25.11■■□□□ 1.61
LIN54-204ENST00000505397 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
LIN54-204ENST00000505397 FYCO1Q9BQS8 1478 aa25.1■■□□□ 1.61
LIN54-204ENST00000505397 CLSPNQ9HAW4 1339 aa25.08■■□□□ 1.61
LIN54-204ENST00000505397 CFAP43Q8NDM7 1665 aa25.08■■□□□ 1.6
LIN54-204ENST00000505397 RRBP1Q9P2E9 1410 aaKnown RBP25.06■■□□□ 1.6
LIN54-204ENST00000505397 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
LIN54-204ENST00000505397 CASKIN1Q8WXD9 1431 aa25.06■■□□□ 1.6
LIN54-204ENST00000505397 ATP1B4Q9UN42 357 aaPredicted RBP25.05■■□□□ 1.6
LIN54-204ENST00000505397 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
LIN54-204ENST00000505397 DHX57Q6P158 1386 aaKnown RBP25.01■■□□□ 1.59
LIN54-204ENST00000505397 LRRC9Q6ZRR7 1453 aa24.99■■□□□ 1.59
LIN54-204ENST00000505397 GTF3C3Q9Y5Q9 886 aa24.99■■□□□ 1.59
LIN54-204ENST00000505397 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
LIN54-204ENST00000505397 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
LIN54-204ENST00000505397 UGGT2Q9NYU1 1516 aa24.96■■□□□ 1.59
LIN54-204ENST00000505397 FBLN2P98095 1184 aa24.92■■□□□ 1.58
LIN54-204ENST00000505397 MIER1Q8N108 512 aa24.92■■□□□ 1.58
LIN54-204ENST00000505397 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
LIN54-204ENST00000505397 CCNB3Q8WWL7 1395 aa24.87■■□□□ 1.57
LIN54-204ENST00000505397 KIAA0556O60303 1618 aa24.86■■□□□ 1.57
LIN54-204ENST00000505397 LRRIQ1Q96JM4 1722 aa24.86■■□□□ 1.57
LIN54-204ENST00000505397 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
LIN54-204ENST00000505397 NUP160Q12769 1436 aa24.83■■□□□ 1.56
LIN54-204ENST00000505397 DISP1Q96F81 1524 aa24.81■■□□□ 1.56
LIN54-204ENST00000505397 CCDC18Q5T9S5 1454 aa24.8■■□□□ 1.56
LIN54-204ENST00000505397 MTUS2Q5JR59 1369 aa24.8■■□□□ 1.56
LIN54-204ENST00000505397 PHLDB1Q86UU1 1377 aa24.77■■□□□ 1.56
LIN54-204ENST00000505397 EHBP1L1Q8N3D4 1523 aa24.73■■□□□ 1.55
LIN54-204ENST00000505397 YTHDC1Q96MU7 727 aaKnown RBP24.72■■□□□ 1.55
LIN54-204ENST00000505397 CHD1O14646 1710 aa24.71■■□□□ 1.55
LIN54-204ENST00000505397 CARMIL2Q6F5E8 1435 aa24.71■■□□□ 1.55
LIN54-204ENST00000505397 SUPT6HQ7KZ85 1726 aaKnown RBP24.71■■□□□ 1.55
LIN54-204ENST00000505397 EPRSP07814 1512 aaKnown RBP24.7■■□□□ 1.54
LIN54-204ENST00000505397 JPH4Q96JJ6 628 aa24.68■■□□□ 1.54
LIN54-204ENST00000505397 RAPGEF6Q8TEU7 1601 aa24.67■■□□□ 1.54
LIN54-204ENST00000505397 ITGAEP38570 1179 aa24.65■■□□□ 1.54
LIN54-204ENST00000505397 CDK13Q14004 1512 aaKnown RBP24.64■■□□□ 1.54
LIN54-204ENST00000505397 FAM50AQ14320 339 aaKnown RBP24.64■■□□□ 1.53
LIN54-204ENST00000505397 NCOA2Q15596 1464 aa24.63■■□□□ 1.53
LIN54-204ENST00000505397 RAB3GAP2Q9H2M9 1393 aa24.63■■□□□ 1.53
LIN54-204ENST00000505397 MAPKBP1O60336 1514 aa24.61■■□□□ 1.53
LIN54-204ENST00000505397 MAGI3Q5TCQ9 1506 aa24.61■■□□□ 1.53
LIN54-204ENST00000505397 FGD6Q6ZV73 1430 aa24.6■■□□□ 1.53
LIN54-204ENST00000505397 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.53
LIN54-204ENST00000505397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.57■■□□□ 1.528e-6■□□□□ 8.4
LIN54-204ENST00000505397 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
LIN54-204ENST00000505397 MYOM3Q5VTT5 1437 aa24.56■■□□□ 1.52
LIN54-204ENST00000505397 SETD5Q9C0A6 1442 aa24.56■■□□□ 1.52
LIN54-204ENST00000505397 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
LIN54-204ENST00000505397 PLB1Q6P1J6 1458 aa24.52■■□□□ 1.52
LIN54-204ENST00000505397 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
LIN54-204ENST00000505397 CDK11AQ9UQ88 783 aaPredicted RBP24.49■■□□□ 1.51
LIN54-204ENST00000505397 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
LIN54-204ENST00000505397 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
LIN54-204ENST00000505397 ABCA8O94911 1581 aa24.44■■□□□ 1.5
LIN54-204ENST00000505397 PTPRGP23470 1445 aa24.39■■□□□ 1.5
LIN54-204ENST00000505397 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
LIN54-204ENST00000505397 MIA2Q96PC5 1412 aa24.38■■□□□ 1.49
LIN54-204ENST00000505397 TCOF1Q13428 1488 aaKnown RBP24.37■■□□□ 1.49
LIN54-204ENST00000505397 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
LIN54-204ENST00000505397 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
LIN54-204ENST00000505397 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.49
LIN54-204ENST00000505397 ITSN2Q9NZM3 1697 aa24.3■■□□□ 1.48
LIN54-204ENST00000505397 ATP10BO94823 1461 aa24.29■■□□□ 1.48
LIN54-204ENST00000505397 PTPRKQ15262 1439 aa24.28■■□□□ 1.48
LIN54-204ENST00000505397 SIN3AQ96ST3 1273 aa24.27■■□□□ 1.48
LIN54-204ENST00000505397 KIF14Q15058 1648 aa24.27■■□□□ 1.48
LIN54-204ENST00000505397 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
LIN54-204ENST00000505397 PLEKHD1A6NEE1 506 aa24.27■■□□□ 1.48
LIN54-204ENST00000505397 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
LIN54-204ENST00000505397 UACAQ9BZF9 1416 aa24.26■■□□□ 1.47
LIN54-204ENST00000505397 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
LIN54-204ENST00000505397 NAIPQ13075 1403 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms