RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 NISCHQ9Y2I1 1504 aa36.6■■■■□ 3.45
LIN54-204ENST00000505397 CCDC180Q9P1Z9 1646 aa31.81■■■□□ 2.68
LIN54-204ENST00000505397 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
LIN54-204ENST00000505397 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.44
LIN54-204ENST00000505397 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
LIN54-204ENST00000505397 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
LIN54-204ENST00000505397 ABCC9O60706 1549 aa29.87■■■□□ 2.37
LIN54-204ENST00000505397 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
LIN54-204ENST00000505397 NACADO15069 1562 aa29.54■■■□□ 2.32
LIN54-204ENST00000505397 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
LIN54-204ENST00000505397 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.27
LIN54-204ENST00000505397 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
LIN54-204ENST00000505397 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
LIN54-204ENST00000505397 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
LIN54-204ENST00000505397 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
LIN54-204ENST00000505397 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
LIN54-204ENST00000505397 BICRAQ9NZM4 1560 aa28.32■■■□□ 2.12
LIN54-204ENST00000505397 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
LIN54-204ENST00000505397 BAZ1AQ9NRL2 1556 aaPredicted RBP28.28■■■□□ 2.12
LIN54-204ENST00000505397 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
LIN54-204ENST00000505397 WIZO95785 1651 aa28.12■■■□□ 2.09
LIN54-204ENST00000505397 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
LIN54-204ENST00000505397 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
LIN54-204ENST00000505397 HRCP23327 699 aa27.77■■■□□ 2.04
LIN54-204ENST00000505397 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.02
LIN54-204ENST00000505397 PCGF6Q9BYE7 350 aa27.58■■■□□ 2.01
LIN54-204ENST00000505397 SMARCA2P51531 1590 aa27.57■■■□□ 2
LIN54-204ENST00000505397 LOC105371045A0A1W2PR82 267 aa27.57■■■□□ 2
LIN54-204ENST00000505397 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
LIN54-204ENST00000505397 CCDC88BA6NC98 1476 aa27.51■■■□□ 2
LIN54-204ENST00000505397 EIF4G1Q04637 1599 aaKnown RBP27.49■■□□□ 1.99
LIN54-204ENST00000505397 BAZ1BQ9UIG0 1483 aaKnown RBP27.46■■□□□ 1.99
LIN54-204ENST00000505397 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
LIN54-204ENST00000505397 HMGXB3Q12766 1538 aa27.26■■□□□ 1.95
LIN54-204ENST00000505397 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
LIN54-204ENST00000505397 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
LIN54-204ENST00000505397 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
LIN54-204ENST00000505397 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
LIN54-204ENST00000505397 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
LIN54-204ENST00000505397 FAM9AQ8IZU1 332 aaPredicted RBP26.92■■□□□ 1.9
LIN54-204ENST00000505397 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
LIN54-204ENST00000505397 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
LIN54-204ENST00000505397 CFTRP13569 1480 aa26.73■■□□□ 1.87
LIN54-204ENST00000505397 PRDM2Q13029 1718 aa26.69■■□□□ 1.86
LIN54-204ENST00000505397 ZEB1P37275 1124 aaPredicted RBP26.65■■□□□ 1.86
LIN54-204ENST00000505397 EEA1Q15075 1411 aa26.61■■□□□ 1.85
LIN54-204ENST00000505397 SOGA1O94964 1423 aa26.6■■□□□ 1.85
LIN54-204ENST00000505397 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
LIN54-204ENST00000505397 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
LIN54-204ENST00000505397 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.84
LIN54-204ENST00000505397 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
LIN54-204ENST00000505397 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
LIN54-204ENST00000505397 CUX1P39880 1505 aa26.44■■□□□ 1.82
LIN54-204ENST00000505397 CSRNP3Q8WYN3 585 aa26.43■■□□□ 1.82
LIN54-204ENST00000505397 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
LIN54-204ENST00000505397 LAMC3Q9Y6N6 1575 aa26.32■■□□□ 1.8
LIN54-204ENST00000505397 NESP48681 1621 aa26.29■■□□□ 1.8
LIN54-204ENST00000505397 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
LIN54-204ENST00000505397 KIF21BO75037 1637 aa26.26■■□□□ 1.79
LIN54-204ENST00000505397 CEP164Q9UPV0 1460 aa26.25■■□□□ 1.79
LIN54-204ENST00000505397 TNIKQ9UKE5 1360 aa26.21■■□□□ 1.79
LIN54-204ENST00000505397 UBTFP17480 764 aaKnown RBP26.19■■□□□ 1.78
LIN54-204ENST00000505397 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
LIN54-204ENST00000505397 CEP162Q5TB80 1403 aa26.16■■□□□ 1.78
LIN54-204ENST00000505397 KIF27Q86VH2 1401 aa26.16■■□□□ 1.78
LIN54-204ENST00000505397 DNMBPQ6XZF7 1577 aa26.14■■□□□ 1.78
LIN54-204ENST00000505397 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
LIN54-204ENST00000505397 PDS5BQ9NTI5 1447 aa26.11■■□□□ 1.77
LIN54-204ENST00000505397 TOPBP1Q92547 1522 aa26.06■■□□□ 1.76
LIN54-204ENST00000505397 RAPGEF2Q9Y4G8 1499 aa26.06■■□□□ 1.76
LIN54-204ENST00000505397 CUX2O14529 1486 aa26.04■■□□□ 1.76
LIN54-204ENST00000505397 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
LIN54-204ENST00000505397 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
LIN54-204ENST00000505397 PRXQ9BXM0 1461 aa26■■□□□ 1.75
LIN54-204ENST00000505397 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
LIN54-204ENST00000505397 URB2Q14146 1524 aaKnown RBP25.96■■□□□ 1.75
LIN54-204ENST00000505397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.95■■□□□ 1.75
LIN54-204ENST00000505397 CCER1Q8TC90 406 aaPredicted RBP25.9■■□□□ 1.74
LIN54-204ENST00000505397 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
LIN54-204ENST00000505397 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
LIN54-204ENST00000505397 CLIP1P30622 1438 aa25.87■■□□□ 1.73
LIN54-204ENST00000505397 IGF1RP08069 1367 aa25.84■■□□□ 1.73
LIN54-204ENST00000505397 WDR97A6NE52 1622 aa25.8■■□□□ 1.72
LIN54-204ENST00000505397 MRC2Q9UBG0 1479 aa25.76■■□□□ 1.71
LIN54-204ENST00000505397 CARMIL1Q5VZK9 1371 aa25.75■■□□□ 1.71
LIN54-204ENST00000505397 RANGAP1P46060 587 aaPredicted RBP25.73■■□□□ 1.71
LIN54-204ENST00000505397 TTBK1Q5TCY1 1321 aaPredicted RBP25.7■■□□□ 1.7
LIN54-204ENST00000505397 CUL7Q14999 1698 aa25.69■■□□□ 1.7
LIN54-204ENST00000505397 VPS8Q8N3P4 1428 aa25.68■■□□□ 1.7
LIN54-204ENST00000505397 ABCA5Q8WWZ7 1642 aa25.67■■□□□ 1.7
LIN54-204ENST00000505397 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.69
LIN54-204ENST00000505397 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
LIN54-204ENST00000505397 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
LIN54-204ENST00000505397 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
LIN54-204ENST00000505397 WDR62O43379 1518 aa25.6■■□□□ 1.69
LIN54-204ENST00000505397 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
LIN54-204ENST00000505397 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
LIN54-204ENST00000505397 APLP2Q06481 763 aa25.51■■□□□ 1.67
LIN54-204ENST00000505397 ARHGAP35Q9NRY4 1499 aa25.5■■□□□ 1.67
LIN54-204ENST00000505397 PBRM1Q86U86 1689 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms