RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
DDX41-203ENST00000504781 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
DDX41-203ENST00000504781 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
DDX41-203ENST00000504781 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
DDX41-203ENST00000504781 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
DDX41-203ENST00000504781 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.17
DDX41-203ENST00000504781 CUL7Q14999 1698 aa16.11■□□□□ 0.17
DDX41-203ENST00000504781 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
DDX41-203ENST00000504781 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
DDX41-203ENST00000504781 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
DDX41-203ENST00000504781 ADAMTS12P58397 1594 aa16■□□□□ 0.15
DDX41-203ENST00000504781 CLIP1P30622 1438 aa16■□□□□ 0.15
DDX41-203ENST00000504781 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
DDX41-203ENST00000504781 NUP160Q12769 1436 aa15.95■□□□□ 0.14
DDX41-203ENST00000504781 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
DDX41-203ENST00000504781 RANGAP1P46060 587 aaPredicted RBP15.9■□□□□ 0.14
DDX41-203ENST00000504781 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
DDX41-203ENST00000504781 PRG4Q92954 1404 aaPredicted RBP15.87■□□□□ 0.13
DDX41-203ENST00000504781 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
DDX41-203ENST00000504781 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
DDX41-203ENST00000504781 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
DDX41-203ENST00000504781 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
DDX41-203ENST00000504781 SHROOM2Q13796 1616 aa15.84■□□□□ 0.13
DDX41-203ENST00000504781 APLP2Q06481 763 aa15.82■□□□□ 0.12
DDX41-203ENST00000504781 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
DDX41-203ENST00000504781 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
DDX41-203ENST00000504781 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
DDX41-203ENST00000504781 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
DDX41-203ENST00000504781 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
DDX41-203ENST00000504781 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
DDX41-203ENST00000504781 UGGT2Q9NYU1 1516 aa15.75■□□□□ 0.11
DDX41-203ENST00000504781 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
DDX41-203ENST00000504781 SAMD9Q5K651 1589 aa15.72■□□□□ 0.11
DDX41-203ENST00000504781 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
DDX41-203ENST00000504781 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
DDX41-203ENST00000504781 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
DDX41-203ENST00000504781 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
DDX41-203ENST00000504781 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
DDX41-203ENST00000504781 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
DDX41-203ENST00000504781 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
DDX41-203ENST00000504781 PTPRGP23470 1445 aa15.64■□□□□ 0.09
DDX41-203ENST00000504781 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
DDX41-203ENST00000504781 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
DDX41-203ENST00000504781 FYCO1Q9BQS8 1478 aa15.61■□□□□ 0.09
DDX41-203ENST00000504781 ATP1B4Q9UN42 357 aaPredicted RBP15.61■□□□□ 0.09
DDX41-203ENST00000504781 KIF13AQ9H1H9 1805 aa15.6■□□□□ 0.09
DDX41-203ENST00000504781 KIAA0556O60303 1618 aa15.59■□□□□ 0.09
DDX41-203ENST00000504781 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
DDX41-203ENST00000504781 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
DDX41-203ENST00000504781 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
DDX41-203ENST00000504781 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
DDX41-203ENST00000504781 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
DDX41-203ENST00000504781 DIP2BQ9P265 1576 aa15.52■□□□□ 0.07
DDX41-203ENST00000504781 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
DDX41-203ENST00000504781 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
DDX41-203ENST00000504781 CCDC18Q5T9S5 1454 aa15.5■□□□□ 0.07
DDX41-203ENST00000504781 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
DDX41-203ENST00000504781 ABCC2Q92887 1545 aa15.49■□□□□ 0.07
DDX41-203ENST00000504781 TSPOAP1O95153 1857 aa15.48■□□□□ 0.07
DDX41-203ENST00000504781 HECW1Q76N89 1606 aa15.47■□□□□ 0.07
DDX41-203ENST00000504781 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
DDX41-203ENST00000504781 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.07
DDX41-203ENST00000504781 RAPGEF6Q8TEU7 1601 aa15.46■□□□□ 0.06
DDX41-203ENST00000504781 CFAP43Q8NDM7 1665 aa15.45■□□□□ 0.06
DDX41-203ENST00000504781 MTUS2Q5JR59 1369 aa15.45■□□□□ 0.06
DDX41-203ENST00000504781 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
DDX41-203ENST00000504781 PLB1Q6P1J6 1458 aa15.44■□□□□ 0.06
DDX41-203ENST00000504781 KDM6BO15054 1643 aa15.42■□□□□ 0.06
DDX41-203ENST00000504781 ABCA8O94911 1581 aa15.41■□□□□ 0.06
DDX41-203ENST00000504781 NUP153P49790 1475 aaKnown RBP15.41■□□□□ 0.06
DDX41-203ENST00000504781 PLEKHD1A6NEE1 506 aa15.4■□□□□ 0.06
DDX41-203ENST00000504781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
DDX41-203ENST00000504781 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
DDX41-203ENST00000504781 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
DDX41-203ENST00000504781 RRBP1Q9P2E9 1410 aaKnown RBP15.38■□□□□ 0.05
DDX41-203ENST00000504781 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
DDX41-203ENST00000504781 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
DDX41-203ENST00000504781 ATP10BO94823 1461 aa15.37■□□□□ 0.05
DDX41-203ENST00000504781 ZCCHC11Q5TAX3 1644 aaKnown RBP15.36■□□□□ 0.05
DDX41-203ENST00000504781 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
DDX41-203ENST00000504781 EHBP1L1Q8N3D4 1523 aa15.35■□□□□ 0.05
DDX41-203ENST00000504781 GLI2P10070 1586 aa15.35■□□□□ 0.05
DDX41-203ENST00000504781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.35■□□□□ 0.05
DDX41-203ENST00000504781 CCNB3Q8WWL7 1395 aa15.34■□□□□ 0.05
DDX41-203ENST00000504781 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.05
DDX41-203ENST00000504781 PHLDB1Q86UU1 1377 aa15.33■□□□□ 0.04
DDX41-203ENST00000504781 SUPT6HQ7KZ85 1726 aaKnown RBP15.32■□□□□ 0.04
DDX41-203ENST00000504781 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
DDX41-203ENST00000504781 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
DDX41-203ENST00000504781 MAGI3Q5TCQ9 1506 aa15.3■□□□□ 0.04
DDX41-203ENST00000504781 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
DDX41-203ENST00000504781 PPRC1Q5VV67 1664 aaKnown RBP15.29■□□□□ 0.04
DDX41-203ENST00000504781 KDM4FA0A1W2PPD8 638 aa15.29■□□□□ 0.04
DDX41-203ENST00000504781 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.04
DDX41-203ENST00000504781 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
DDX41-203ENST00000504781 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
DDX41-203ENST00000504781 MIA2Q96PC5 1412 aa15.26■□□□□ 0.03
DDX41-203ENST00000504781 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
DDX41-203ENST00000504781 COL17A1Q9UMD9 1497 aaPredicted RBP15.25■□□□□ 0.03
DDX41-203ENST00000504781 CD109Q6YHK3 1445 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms