RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NISCHQ9Y2I1 1504 aa23.07■■□□□ 1.28
DDX41-203ENST00000504781 ABCC9O60706 1549 aa20.27■□□□□ 0.83
DDX41-203ENST00000504781 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
DDX41-203ENST00000504781 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
DDX41-203ENST00000504781 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
DDX41-203ENST00000504781 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
DDX41-203ENST00000504781 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
DDX41-203ENST00000504781 NACADO15069 1562 aa19.1■□□□□ 0.65
DDX41-203ENST00000504781 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
DDX41-203ENST00000504781 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
DDX41-203ENST00000504781 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
DDX41-203ENST00000504781 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
DDX41-203ENST00000504781 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
DDX41-203ENST00000504781 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
DDX41-203ENST00000504781 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
DDX41-203ENST00000504781 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
DDX41-203ENST00000504781 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
DDX41-203ENST00000504781 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
DDX41-203ENST00000504781 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
DDX41-203ENST00000504781 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
DDX41-203ENST00000504781 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
DDX41-203ENST00000504781 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
DDX41-203ENST00000504781 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
DDX41-203ENST00000504781 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
DDX41-203ENST00000504781 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
DDX41-203ENST00000504781 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
DDX41-203ENST00000504781 WIZO95785 1651 aa17.58■□□□□ 0.41
DDX41-203ENST00000504781 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
DDX41-203ENST00000504781 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
DDX41-203ENST00000504781 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
DDX41-203ENST00000504781 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
DDX41-203ENST00000504781 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
DDX41-203ENST00000504781 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
DDX41-203ENST00000504781 NESP48681 1621 aa17.41■□□□□ 0.38
DDX41-203ENST00000504781 CUX2O14529 1486 aa17.36■□□□□ 0.37
DDX41-203ENST00000504781 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
DDX41-203ENST00000504781 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
DDX41-203ENST00000504781 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
DDX41-203ENST00000504781 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
DDX41-203ENST00000504781 PDS5BQ9NTI5 1447 aa17.19■□□□□ 0.34
DDX41-203ENST00000504781 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
DDX41-203ENST00000504781 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
DDX41-203ENST00000504781 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
DDX41-203ENST00000504781 MRC2Q9UBG0 1479 aa17.01■□□□□ 0.31
DDX41-203ENST00000504781 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
DDX41-203ENST00000504781 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
DDX41-203ENST00000504781 CFTRP13569 1480 aa16.96■□□□□ 0.31
DDX41-203ENST00000504781 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
DDX41-203ENST00000504781 WDR62O43379 1518 aa16.93■□□□□ 0.3
DDX41-203ENST00000504781 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
DDX41-203ENST00000504781 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
DDX41-203ENST00000504781 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
DDX41-203ENST00000504781 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
DDX41-203ENST00000504781 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
DDX41-203ENST00000504781 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
DDX41-203ENST00000504781 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
DDX41-203ENST00000504781 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
DDX41-203ENST00000504781 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
DDX41-203ENST00000504781 IFT140Q96RY7 1462 aa16.62■□□□□ 0.25
DDX41-203ENST00000504781 CUX1P39880 1505 aa16.6■□□□□ 0.25
DDX41-203ENST00000504781 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
DDX41-203ENST00000504781 EEA1Q15075 1411 aa16.6■□□□□ 0.25
DDX41-203ENST00000504781 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
DDX41-203ENST00000504781 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
DDX41-203ENST00000504781 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
DDX41-203ENST00000504781 SOGA1O94964 1423 aa16.52■□□□□ 0.23
DDX41-203ENST00000504781 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.232e-20■■■■■ 104.7
DDX41-203ENST00000504781 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
DDX41-203ENST00000504781 FBLN2P98095 1184 aa16.48■□□□□ 0.23
DDX41-203ENST00000504781 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
DDX41-203ENST00000504781 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
DDX41-203ENST00000504781 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
DDX41-203ENST00000504781 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
DDX41-203ENST00000504781 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
DDX41-203ENST00000504781 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
DDX41-203ENST00000504781 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
DDX41-203ENST00000504781 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
DDX41-203ENST00000504781 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
DDX41-203ENST00000504781 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
DDX41-203ENST00000504781 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
DDX41-203ENST00000504781 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
DDX41-203ENST00000504781 CHD1O14646 1710 aa16.35■□□□□ 0.21
DDX41-203ENST00000504781 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
DDX41-203ENST00000504781 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
DDX41-203ENST00000504781 IGF1RP08069 1367 aa16.32■□□□□ 0.2
DDX41-203ENST00000504781 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
DDX41-203ENST00000504781 SNAPC4Q5SXM2 1469 aa16.3■□□□□ 0.2
DDX41-203ENST00000504781 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.2
DDX41-203ENST00000504781 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
DDX41-203ENST00000504781 KIF21BO75037 1637 aa16.27■□□□□ 0.19
DDX41-203ENST00000504781 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
DDX41-203ENST00000504781 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
DDX41-203ENST00000504781 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
DDX41-203ENST00000504781 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
DDX41-203ENST00000504781 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
DDX41-203ENST00000504781 CARMIL1Q5VZK9 1371 aa16.23■□□□□ 0.19
DDX41-203ENST00000504781 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
DDX41-203ENST00000504781 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
DDX41-203ENST00000504781 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
DDX41-203ENST00000504781 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms