RNA–Protein interactions for RNA: ENST00000504609.3

LINC01033-201, Transcript of long intergenic non-protein coding RNA 1033, humanhuman

TSL 5 BASIC

Gene LINC01033, Length 735 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01033-201ENST00000504609 SHROOM2Q13796 1616 aa19.15■□□□□ 0.66
LINC01033-201ENST00000504609 RUSC2Q8N2Y8 1516 aa19.14■□□□□ 0.65
LINC01033-201ENST00000504609 IGF1RP08069 1367 aa19.12■□□□□ 0.65
LINC01033-201ENST00000504609 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
LINC01033-201ENST00000504609 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.64
LINC01033-201ENST00000504609 JPH4Q96JJ6 628 aa19.04■□□□□ 0.64
LINC01033-201ENST00000504609 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
LINC01033-201ENST00000504609 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
LINC01033-201ENST00000504609 IQGAP2Q13576 1575 aa18.92■□□□□ 0.62
LINC01033-201ENST00000504609 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
LINC01033-201ENST00000504609 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
LINC01033-201ENST00000504609 ADCY10Q96PN6 1610 aa18.85■□□□□ 0.61
LINC01033-201ENST00000504609 CTTNBP2Q8WZ74 1663 aa18.84■□□□□ 0.61
LINC01033-201ENST00000504609 CARMIL2Q6F5E8 1435 aa18.83■□□□□ 0.61
LINC01033-201ENST00000504609 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
LINC01033-201ENST00000504609 PTPRGP23470 1445 aa18.79■□□□□ 0.6
LINC01033-201ENST00000504609 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
LINC01033-201ENST00000504609 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
LINC01033-201ENST00000504609 DISP1Q96F81 1524 aa18.75■□□□□ 0.59
LINC01033-201ENST00000504609 UGGT2Q9NYU1 1516 aa18.75■□□□□ 0.59
LINC01033-201ENST00000504609 KIAA0556O60303 1618 aa18.75■□□□□ 0.59
LINC01033-201ENST00000504609 PRXQ9BXM0 1461 aa18.74■□□□□ 0.59
LINC01033-201ENST00000504609 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
LINC01033-201ENST00000504609 DIP2BQ9P265 1576 aa18.68■□□□□ 0.58
LINC01033-201ENST00000504609 FAM9AQ8IZU1 332 aaPredicted RBP18.68■□□□□ 0.58
LINC01033-201ENST00000504609 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
LINC01033-201ENST00000504609 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
LINC01033-201ENST00000504609 CSRNP3Q8WYN3 585 aa18.67■□□□□ 0.58
LINC01033-201ENST00000504609 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
LINC01033-201ENST00000504609 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
LINC01033-201ENST00000504609 TSPOAP1O95153 1857 aa18.65■□□□□ 0.58
LINC01033-201ENST00000504609 EEA1Q15075 1411 aa18.64■□□□□ 0.57
LINC01033-201ENST00000504609 GOLGA3Q08378 1498 aa18.64■□□□□ 0.57
LINC01033-201ENST00000504609 UHRF1BP1LA0JNW5 1464 aa18.62■□□□□ 0.57
LINC01033-201ENST00000504609 ZCCHC11Q5TAX3 1644 aaKnown RBP18.6■□□□□ 0.57
LINC01033-201ENST00000504609 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
LINC01033-201ENST00000504609 PLB1Q6P1J6 1458 aa18.58■□□□□ 0.56
LINC01033-201ENST00000504609 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
LINC01033-201ENST00000504609 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
LINC01033-201ENST00000504609 KDM5BQ9UGL1 1544 aa18.54■□□□□ 0.56
LINC01033-201ENST00000504609 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
LINC01033-201ENST00000504609 KIF21BO75037 1637 aa18.53■□□□□ 0.56
LINC01033-201ENST00000504609 ABCA8O94911 1581 aa18.52■□□□□ 0.56
LINC01033-201ENST00000504609 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
LINC01033-201ENST00000504609 KDM6BO15054 1643 aa18.49■□□□□ 0.55
LINC01033-201ENST00000504609 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
LINC01033-201ENST00000504609 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
LINC01033-201ENST00000504609 GLI2P10070 1586 aa18.47■□□□□ 0.55
LINC01033-201ENST00000504609 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.54
LINC01033-201ENST00000504609 PPRC1Q5VV67 1664 aaKnown RBP18.45■□□□□ 0.54
LINC01033-201ENST00000504609 FHOD3Q2V2M9 1422 aa18.43■□□□□ 0.54
LINC01033-201ENST00000504609 MAP3K4Q9Y6R4 1608 aa18.43■□□□□ 0.54
LINC01033-201ENST00000504609 RAPGEF6Q8TEU7 1601 aa18.42■□□□□ 0.54
LINC01033-201ENST00000504609 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
LINC01033-201ENST00000504609 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
LINC01033-201ENST00000504609 KCNH8Q96L42 1107 aa18.39■□□□□ 0.53
LINC01033-201ENST00000504609 EFCAB5A4FU69 1503 aa18.37■□□□□ 0.53
LINC01033-201ENST00000504609 ATP10BO94823 1461 aa18.35■□□□□ 0.53
LINC01033-201ENST00000504609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
LINC01033-201ENST00000504609 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
LINC01033-201ENST00000504609 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
LINC01033-201ENST00000504609 TEX14Q8IWB6 1497 aa18.34■□□□□ 0.53
LINC01033-201ENST00000504609 NUP153P49790 1475 aaKnown RBP18.31■□□□□ 0.52
LINC01033-201ENST00000504609 CD109Q6YHK3 1445 aa18.3■□□□□ 0.52
LINC01033-201ENST00000504609 COL17A1Q9UMD9 1497 aaPredicted RBP18.25■□□□□ 0.51
LINC01033-201ENST00000504609 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
LINC01033-201ENST00000504609 ARHGAP35Q9NRY4 1499 aa18.24■□□□□ 0.51
LINC01033-201ENST00000504609 ATP1B4Q9UN42 357 aaPredicted RBP18.23■□□□□ 0.51
LINC01033-201ENST00000504609 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
LINC01033-201ENST00000504609 CDK13Q14004 1512 aaKnown RBP18.22■□□□□ 0.51
LINC01033-201ENST00000504609 HECW1Q76N89 1606 aa18.2■□□□□ 0.5
LINC01033-201ENST00000504609 FMN1Q68DA7 1419 aa18.19■□□□□ 0.5
LINC01033-201ENST00000504609 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
LINC01033-201ENST00000504609 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
LINC01033-201ENST00000504609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC01033-201ENST00000504609 LRRIQ1Q96JM4 1722 aa18.11■□□□□ 0.49
LINC01033-201ENST00000504609 PCF11O94913 1555 aaKnown RBP18.1■□□□□ 0.49
LINC01033-201ENST00000504609 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
LINC01033-201ENST00000504609 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.49
LINC01033-201ENST00000504609 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
LINC01033-201ENST00000504609 NEO1Q92859 1461 aa18.07■□□□□ 0.48
LINC01033-201ENST00000504609 CFAP74Q9C0B2 1584 aa18.07■□□□□ 0.48
LINC01033-201ENST00000504609 CLIP1P30622 1438 aa18.06■□□□□ 0.48
LINC01033-201ENST00000504609 KIF14Q15058 1648 aa18.05■□□□□ 0.48
LINC01033-201ENST00000504609 FANCAO15360 1455 aa18.04■□□□□ 0.48
LINC01033-201ENST00000504609 RAPGEF3O95398 923 aa18.04■□□□□ 0.48
LINC01033-201ENST00000504609 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
LINC01033-201ENST00000504609 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
LINC01033-201ENST00000504609 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
LINC01033-201ENST00000504609 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
LINC01033-201ENST00000504609 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
LINC01033-201ENST00000504609 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
LINC01033-201ENST00000504609 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
LINC01033-201ENST00000504609 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
LINC01033-201ENST00000504609 RICTORQ6R327 1708 aa17.99■□□□□ 0.47
LINC01033-201ENST00000504609 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
LINC01033-201ENST00000504609 DENND4BO75064 1496 aaPredicted RBP17.98■□□□□ 0.47
LINC01033-201ENST00000504609 PLCH2O75038 1416 aa17.95■□□□□ 0.46
LINC01033-201ENST00000504609 ARHGAP5Q13017 1502 aa17.94■□□□□ 0.46
LINC01033-201ENST00000504609 ARHGEF40Q8TER5 1519 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms