RNA–Protein interactions for RNA: ENST00000504609.3

LINC01033-201, Transcript of long intergenic non-protein coding RNA 1033, humanhuman

TSL 5 BASIC

Gene LINC01033, Length 735 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01033-201ENST00000504609 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
LINC01033-201ENST00000504609 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
LINC01033-201ENST00000504609 ABCC9O60706 1549 aa24.25■■□□□ 1.47
LINC01033-201ENST00000504609 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
LINC01033-201ENST00000504609 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
LINC01033-201ENST00000504609 NACADO15069 1562 aa23.05■■□□□ 1.28
LINC01033-201ENST00000504609 ZCCHC6Q5VYS8 1495 aaKnown RBP22.76■■□□□ 1.23
LINC01033-201ENST00000504609 MYO15BQ96JP2 1530 aa22.74■■□□□ 1.23
LINC01033-201ENST00000504609 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
LINC01033-201ENST00000504609 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
LINC01033-201ENST00000504609 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
LINC01033-201ENST00000504609 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
LINC01033-201ENST00000504609 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
LINC01033-201ENST00000504609 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
LINC01033-201ENST00000504609 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
LINC01033-201ENST00000504609 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
LINC01033-201ENST00000504609 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
LINC01033-201ENST00000504609 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
LINC01033-201ENST00000504609 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
LINC01033-201ENST00000504609 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
LINC01033-201ENST00000504609 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
LINC01033-201ENST00000504609 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
LINC01033-201ENST00000504609 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
LINC01033-201ENST00000504609 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
LINC01033-201ENST00000504609 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
LINC01033-201ENST00000504609 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
LINC01033-201ENST00000504609 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
LINC01033-201ENST00000504609 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
LINC01033-201ENST00000504609 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
LINC01033-201ENST00000504609 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
LINC01033-201ENST00000504609 WIZO95785 1651 aa20.94■□□□□ 0.94
LINC01033-201ENST00000504609 NESP48681 1621 aa20.9■□□□□ 0.94
LINC01033-201ENST00000504609 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
LINC01033-201ENST00000504609 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
LINC01033-201ENST00000504609 CUX2O14529 1486 aa20.72■□□□□ 0.91
LINC01033-201ENST00000504609 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.9
LINC01033-201ENST00000504609 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
LINC01033-201ENST00000504609 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
LINC01033-201ENST00000504609 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
LINC01033-201ENST00000504609 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
LINC01033-201ENST00000504609 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
LINC01033-201ENST00000504609 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
LINC01033-201ENST00000504609 CFTRP13569 1480 aa20.44■□□□□ 0.86
LINC01033-201ENST00000504609 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
LINC01033-201ENST00000504609 PRDM2Q13029 1718 aa20.39■□□□□ 0.86
LINC01033-201ENST00000504609 WDR62O43379 1518 aa20.39■□□□□ 0.85
LINC01033-201ENST00000504609 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
LINC01033-201ENST00000504609 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
LINC01033-201ENST00000504609 URB2Q14146 1524 aaKnown RBP20.25■□□□□ 0.83
LINC01033-201ENST00000504609 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
LINC01033-201ENST00000504609 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
LINC01033-201ENST00000504609 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
LINC01033-201ENST00000504609 ABCC8Q09428 1581 aa20■□□□□ 0.79
LINC01033-201ENST00000504609 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
LINC01033-201ENST00000504609 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
LINC01033-201ENST00000504609 EIF4G3O43432 1585 aaKnown RBP19.91■□□□□ 0.78
LINC01033-201ENST00000504609 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
LINC01033-201ENST00000504609 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
LINC01033-201ENST00000504609 CUX1P39880 1505 aa19.85■□□□□ 0.77
LINC01033-201ENST00000504609 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
LINC01033-201ENST00000504609 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.76
LINC01033-201ENST00000504609 AQRO60306 1485 aaKnown RBP eCLIP19.81■□□□□ 0.761e-9■■■□□ 15.5
LINC01033-201ENST00000504609 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
LINC01033-201ENST00000504609 SOGA1O94964 1423 aa19.79■□□□□ 0.76
LINC01033-201ENST00000504609 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
LINC01033-201ENST00000504609 CHD1O14646 1710 aa19.75■□□□□ 0.75
LINC01033-201ENST00000504609 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
LINC01033-201ENST00000504609 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
LINC01033-201ENST00000504609 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
LINC01033-201ENST00000504609 FBLN2P98095 1184 aa19.68■□□□□ 0.74
LINC01033-201ENST00000504609 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
LINC01033-201ENST00000504609 PBRM1Q86U86 1689 aa19.63■□□□□ 0.73
LINC01033-201ENST00000504609 SYNJ1O43426 1573 aa19.62■□□□□ 0.73
LINC01033-201ENST00000504609 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
LINC01033-201ENST00000504609 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
LINC01033-201ENST00000504609 RIMBP3CA6NJZ7 1639 aa19.61■□□□□ 0.73
LINC01033-201ENST00000504609 RIMBP3BA6NNM3 1639 aa19.61■□□□□ 0.73
LINC01033-201ENST00000504609 RIMBP3Q9UFD9 1639 aa19.61■□□□□ 0.73
LINC01033-201ENST00000504609 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
LINC01033-201ENST00000504609 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
LINC01033-201ENST00000504609 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
LINC01033-201ENST00000504609 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
LINC01033-201ENST00000504609 ABCA5Q8WWZ7 1642 aa19.57■□□□□ 0.72
LINC01033-201ENST00000504609 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
LINC01033-201ENST00000504609 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
LINC01033-201ENST00000504609 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
LINC01033-201ENST00000504609 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
LINC01033-201ENST00000504609 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
LINC01033-201ENST00000504609 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
LINC01033-201ENST00000504609 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
LINC01033-201ENST00000504609 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
LINC01033-201ENST00000504609 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
LINC01033-201ENST00000504609 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
LINC01033-201ENST00000504609 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
LINC01033-201ENST00000504609 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
LINC01033-201ENST00000504609 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
LINC01033-201ENST00000504609 NUP160Q12769 1436 aa19.24■□□□□ 0.67
LINC01033-201ENST00000504609 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
LINC01033-201ENST00000504609 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
LINC01033-201ENST00000504609 CUL7Q14999 1698 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms