RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 CCNB3Q8WWL7 1395 aa27.75■■■□□ 2.03
LPCAT1-203ENST00000503252 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
LPCAT1-203ENST00000503252 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
LPCAT1-203ENST00000503252 FHOD3Q2V2M9 1422 aa27.72■■■□□ 2.03
LPCAT1-203ENST00000503252 DIEXFQ68CQ4 756 aaKnown RBP27.72■■■□□ 2.03
LPCAT1-203ENST00000503252 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
LPCAT1-203ENST00000503252 PCF11O94913 1555 aaKnown RBP27.7■■■□□ 2.03
LPCAT1-203ENST00000503252 CTTNBP2Q8WZ74 1663 aa27.7■■■□□ 2.02
LPCAT1-203ENST00000503252 LRRC9Q6ZRR7 1453 aa27.69■■■□□ 2.02
LPCAT1-203ENST00000503252 SCAF1Q9H7N4 1312 aaKnown RBP27.68■■■□□ 2.02
LPCAT1-203ENST00000503252 EFCAB5A4FU69 1503 aa27.67■■■□□ 2.02
LPCAT1-203ENST00000503252 ATP1B4Q9UN42 357 aaPredicted RBP27.65■■■□□ 2.02
LPCAT1-203ENST00000503252 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
LPCAT1-203ENST00000503252 ZNF316A6NFI3 1004 aaPredicted RBP27.65■■■□□ 2.02
LPCAT1-203ENST00000503252 ITGAEP38570 1179 aa27.63■■■□□ 2.01
LPCAT1-203ENST00000503252 CFAP43Q8NDM7 1665 aa27.61■■■□□ 2.01
LPCAT1-203ENST00000503252 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
LPCAT1-203ENST00000503252 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
LPCAT1-203ENST00000503252 FYCO1Q9BQS8 1478 aa27.58■■■□□ 2
LPCAT1-203ENST00000503252 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
LPCAT1-203ENST00000503252 CLSPNQ9HAW4 1339 aa27.56■■■□□ 2
LPCAT1-203ENST00000503252 AQRO60306 1485 aaKnown RBP eCLIP27.54■■■□□ 24e-6■■■■■ 31
LPCAT1-203ENST00000503252 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
LPCAT1-203ENST00000503252 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
LPCAT1-203ENST00000503252 SAMD9Q5K651 1589 aa27.47■■□□□ 1.99
LPCAT1-203ENST00000503252 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
LPCAT1-203ENST00000503252 FAM50AQ14320 339 aaKnown RBP27.44■■□□□ 1.98
LPCAT1-203ENST00000503252 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
LPCAT1-203ENST00000503252 RAB3GAP2Q9H2M9 1393 aa27.42■■□□□ 1.98
LPCAT1-203ENST00000503252 SETD5Q9C0A6 1442 aa27.34■■□□□ 1.97
LPCAT1-203ENST00000503252 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
LPCAT1-203ENST00000503252 LRRIQ1Q96JM4 1722 aa27.32■■□□□ 1.96
LPCAT1-203ENST00000503252 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
LPCAT1-203ENST00000503252 MTUS2Q5JR59 1369 aa27.3■■□□□ 1.96
LPCAT1-203ENST00000503252 ZNF608Q9ULD9 1512 aaPredicted RBP27.29■■□□□ 1.96
LPCAT1-203ENST00000503252 WDR62O43379 1518 aa27.28■■□□□ 1.96
LPCAT1-203ENST00000503252 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
LPCAT1-203ENST00000503252 MAPKBP1O60336 1514 aa27.25■■□□□ 1.95
LPCAT1-203ENST00000503252 IQGAP2Q13576 1575 aa27.24■■□□□ 1.95
LPCAT1-203ENST00000503252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.24■■□□□ 1.95
LPCAT1-203ENST00000503252 FGD6Q6ZV73 1430 aa27.24■■□□□ 1.95
LPCAT1-203ENST00000503252 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
LPCAT1-203ENST00000503252 MIER1Q8N108 512 aa27.19■■□□□ 1.94
LPCAT1-203ENST00000503252 NEUROD1Q13562 356 aa27.19■■□□□ 1.94
LPCAT1-203ENST00000503252 ACIN1Q9UKV3 1341 aaKnown RBP27.18■■□□□ 1.94
LPCAT1-203ENST00000503252 NCOA2Q15596 1464 aa27.18■■□□□ 1.94
LPCAT1-203ENST00000503252 EHBP1L1Q8N3D4 1523 aa27.13■■□□□ 1.93
LPCAT1-203ENST00000503252 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
LPCAT1-203ENST00000503252 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
LPCAT1-203ENST00000503252 SUPT6HQ7KZ85 1726 aaKnown RBP27.12■■□□□ 1.93
LPCAT1-203ENST00000503252 MYOM3Q5VTT5 1437 aa27.11■■□□□ 1.93
LPCAT1-203ENST00000503252 CCDC18Q5T9S5 1454 aa27.1■■□□□ 1.93
LPCAT1-203ENST00000503252 CENPBP07199 599 aaPredicted RBP27.09■■□□□ 1.93
LPCAT1-203ENST00000503252 HECW1Q76N89 1606 aa27.09■■□□□ 1.93
LPCAT1-203ENST00000503252 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
LPCAT1-203ENST00000503252 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
LPCAT1-203ENST00000503252 PTPRKQ15262 1439 aa27.08■■□□□ 1.93
LPCAT1-203ENST00000503252 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
LPCAT1-203ENST00000503252 EPRSP07814 1512 aaKnown RBP27.05■■□□□ 1.92
LPCAT1-203ENST00000503252 ARHGEF11O15085 1522 aa27.04■■□□□ 1.92
LPCAT1-203ENST00000503252 KIAA0586Q9BVV6 1533 aa27.03■■□□□ 1.92
LPCAT1-203ENST00000503252 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
LPCAT1-203ENST00000503252 GRIN2AQ12879 1464 aa27.02■■□□□ 1.92
LPCAT1-203ENST00000503252 CDK13Q14004 1512 aaKnown RBP27.02■■□□□ 1.92
LPCAT1-203ENST00000503252 YTHDC1Q96MU7 727 aaKnown RBP26.99■■□□□ 1.91
LPCAT1-203ENST00000503252 PTPN23Q9H3S7 1636 aa26.99■■□□□ 1.91
LPCAT1-203ENST00000503252 HFM1A2PYH4 1435 aa26.98■■□□□ 1.91
LPCAT1-203ENST00000503252 DISP1Q96F81 1524 aa26.98■■□□□ 1.91
LPCAT1-203ENST00000503252 KIAA0556O60303 1618 aa26.96■■□□□ 1.91
LPCAT1-203ENST00000503252 NAIPQ13075 1403 aa26.92■■□□□ 1.9
LPCAT1-203ENST00000503252 MAGI1Q96QZ7 1491 aaPredicted RBP26.92■■□□□ 1.9
LPCAT1-203ENST00000503252 CHMP7Q8WUX9 453 aaPredicted RBP26.9■■□□□ 1.9
LPCAT1-203ENST00000503252 TCOF1Q13428 1488 aaKnown RBP26.89■■□□□ 1.9
LPCAT1-203ENST00000503252 UACAQ9BZF9 1416 aa26.87■■□□□ 1.89
LPCAT1-203ENST00000503252 SYNJ2O15056 1496 aa26.86■■□□□ 1.89
LPCAT1-203ENST00000503252 CEP170Q5SW79 1584 aa26.86■■□□□ 1.89
LPCAT1-203ENST00000503252 FBLN2P98095 1184 aa26.85■■□□□ 1.89
LPCAT1-203ENST00000503252 NUP153P49790 1475 aaKnown RBP26.84■■□□□ 1.89
LPCAT1-203ENST00000503252 CHIC2Q9UKJ5 165 aa26.84■■□□□ 1.89
LPCAT1-203ENST00000503252 TIMELESSQ9UNS1 1208 aa26.84■■□□□ 1.89
LPCAT1-203ENST00000503252 GTF3C3Q9Y5Q9 886 aa26.84■■□□□ 1.89
LPCAT1-203ENST00000503252 RRP7BPQ9NSQ0 103 aa26.83■■□□□ 1.88
LPCAT1-203ENST00000503252 MIA2Q96PC5 1412 aa26.81■■□□□ 1.88
LPCAT1-203ENST00000503252 RAPGEF6Q8TEU7 1601 aa26.81■■□□□ 1.88
LPCAT1-203ENST00000503252 PPP1R15AO75807 674 aaPredicted RBP26.77■■□□□ 1.88
LPCAT1-203ENST00000503252 NUP160Q12769 1436 aa26.73■■□□□ 1.87
LPCAT1-203ENST00000503252 GCC2Q8IWJ2 1684 aa26.72■■□□□ 1.87
LPCAT1-203ENST00000503252 JPH4Q96JJ6 628 aa26.71■■□□□ 1.87
LPCAT1-203ENST00000503252 PLB1Q6P1J6 1458 aa26.71■■□□□ 1.87
LPCAT1-203ENST00000503252 TONSLQ96HA7 1378 aa26.7■■□□□ 1.86
LPCAT1-203ENST00000503252 CDK11AQ9UQ88 783 aaPredicted RBP26.7■■□□□ 1.86
LPCAT1-203ENST00000503252 AKNAQ7Z591 1439 aa26.69■■□□□ 1.86
LPCAT1-203ENST00000503252 KDM6BO15054 1643 aa26.69■■□□□ 1.86
LPCAT1-203ENST00000503252 BCL11AQ9H165 835 aa26.69■■□□□ 1.86
LPCAT1-203ENST00000503252 PRKCSHP14314 528 aaPredicted RBP26.67■■□□□ 1.86
LPCAT1-203ENST00000503252 ZNF644Q9H582 1327 aaPredicted RBP26.67■■□□□ 1.86
LPCAT1-203ENST00000503252 PRG4Q92954 1404 aaPredicted RBP26.66■■□□□ 1.86
LPCAT1-203ENST00000503252 CARMIL2Q6F5E8 1435 aa26.65■■□□□ 1.86
LPCAT1-203ENST00000503252 TRIM52Q96A61 297 aa26.64■■□□□ 1.86
LPCAT1-203ENST00000503252 DAPK1P53355 1430 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms