RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 NISCHQ9Y2I1 1504 aa39.84■■■■□ 3.97
LPCAT1-203ENST00000503252 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
LPCAT1-203ENST00000503252 ZCCHC6Q5VYS8 1495 aaKnown RBP33.62■■■□□ 2.97
LPCAT1-203ENST00000503252 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
LPCAT1-203ENST00000503252 DCAF8L2P0C7V8 631 aa33.03■■■□□ 2.88
LPCAT1-203ENST00000503252 DCAF1Q9Y4B6 1507 aa32.74■■■□□ 2.83
LPCAT1-203ENST00000503252 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
LPCAT1-203ENST00000503252 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
LPCAT1-203ENST00000503252 ABCC9O60706 1549 aa31.86■■■□□ 2.69
LPCAT1-203ENST00000503252 SCRIBQ14160 1630 aa31.83■■■□□ 2.69
LPCAT1-203ENST00000503252 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
LPCAT1-203ENST00000503252 NACADO15069 1562 aa31.62■■■□□ 2.65
LPCAT1-203ENST00000503252 RSF1Q96T23 1441 aaPredicted RBP31.35■■■□□ 2.61
LPCAT1-203ENST00000503252 RB1CC1Q8TDY2 1594 aa31.17■■■□□ 2.58
LPCAT1-203ENST00000503252 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
LPCAT1-203ENST00000503252 MROH2BQ7Z745 1585 aa30.93■■■□□ 2.54
LPCAT1-203ENST00000503252 WIZO95785 1651 aa30.74■■■□□ 2.51
LPCAT1-203ENST00000503252 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
LPCAT1-203ENST00000503252 LOC105371045A0A1W2PR82 267 aa30.66■■■□□ 2.5
LPCAT1-203ENST00000503252 BAZ1AQ9NRL2 1556 aaPredicted RBP30.63■■■□□ 2.49
LPCAT1-203ENST00000503252 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
LPCAT1-203ENST00000503252 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
LPCAT1-203ENST00000503252 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.454e-9■■■□□ 14.7
LPCAT1-203ENST00000503252 BICRAQ9NZM4 1560 aa30.35■■■□□ 2.45
LPCAT1-203ENST00000503252 TOP2AP11388 1531 aaKnown RBP30.28■■■□□ 2.44
LPCAT1-203ENST00000503252 FAM9AQ8IZU1 332 aaPredicted RBP30.22■■■□□ 2.43
LPCAT1-203ENST00000503252 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
LPCAT1-203ENST00000503252 PCGF6Q9BYE7 350 aa30.18■■■□□ 2.42
LPCAT1-203ENST00000503252 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
LPCAT1-203ENST00000503252 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
LPCAT1-203ENST00000503252 EHMT2Q96KQ7 1210 aa29.93■■■□□ 2.38
LPCAT1-203ENST00000503252 HRCP23327 699 aa29.92■■■□□ 2.38
LPCAT1-203ENST00000503252 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
LPCAT1-203ENST00000503252 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
LPCAT1-203ENST00000503252 TRIM26Q12899 539 aaPredicted RBP29.75■■■□□ 2.35
LPCAT1-203ENST00000503252 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
LPCAT1-203ENST00000503252 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
LPCAT1-203ENST00000503252 SOGA1O94964 1423 aa29.52■■■□□ 2.32
LPCAT1-203ENST00000503252 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
LPCAT1-203ENST00000503252 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
LPCAT1-203ENST00000503252 PELP1Q8IZL8 1130 aaKnown RBP29.38■■■□□ 2.29
LPCAT1-203ENST00000503252 EEA1Q15075 1411 aa29.34■■■□□ 2.29
LPCAT1-203ENST00000503252 PPARGC1BQ86YN6 1023 aaKnown RBP29.34■■■□□ 2.29
LPCAT1-203ENST00000503252 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
LPCAT1-203ENST00000503252 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
LPCAT1-203ENST00000503252 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
LPCAT1-203ENST00000503252 HMGXB3Q12766 1538 aa29.22■■■□□ 2.27
LPCAT1-203ENST00000503252 TNIKQ9UKE5 1360 aa29.2■■■□□ 2.26
LPCAT1-203ENST00000503252 CEP162Q5TB80 1403 aa29.2■■■□□ 2.26
LPCAT1-203ENST00000503252 UBTFP17480 764 aaKnown RBP29.13■■■□□ 2.25
LPCAT1-203ENST00000503252 GOLGA3Q08378 1498 aa29.1■■■□□ 2.25
LPCAT1-203ENST00000503252 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
LPCAT1-203ENST00000503252 CEP164Q9UPV0 1460 aa28.99■■■□□ 2.23
LPCAT1-203ENST00000503252 KIF21BO75037 1637 aa28.96■■■□□ 2.23
LPCAT1-203ENST00000503252 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
LPCAT1-203ENST00000503252 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
LPCAT1-203ENST00000503252 CFTRP13569 1480 aa28.9■■■□□ 2.22
LPCAT1-203ENST00000503252 TTBK1Q5TCY1 1321 aaPredicted RBP28.86■■■□□ 2.21
LPCAT1-203ENST00000503252 CUX1P39880 1505 aa28.84■■■□□ 2.21
LPCAT1-203ENST00000503252 RAPGEF2Q9Y4G8 1499 aa28.83■■■□□ 2.21
LPCAT1-203ENST00000503252 CLIP1P30622 1438 aa28.74■■■□□ 2.19
LPCAT1-203ENST00000503252 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
LPCAT1-203ENST00000503252 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
LPCAT1-203ENST00000503252 CADPSQ9ULU8 1353 aa28.65■■■□□ 2.18
LPCAT1-203ENST00000503252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.63■■■□□ 2.17
LPCAT1-203ENST00000503252 PRXQ9BXM0 1461 aa28.63■■■□□ 2.17
LPCAT1-203ENST00000503252 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
LPCAT1-203ENST00000503252 MYT1Q01538 1121 aa28.62■■■□□ 2.17
LPCAT1-203ENST00000503252 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
LPCAT1-203ENST00000503252 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
LPCAT1-203ENST00000503252 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
LPCAT1-203ENST00000503252 CCER1Q8TC90 406 aaPredicted RBP28.52■■■□□ 2.16
LPCAT1-203ENST00000503252 CUX2O14529 1486 aa28.39■■■□□ 2.14
LPCAT1-203ENST00000503252 APLP2Q06481 763 aa28.38■■■□□ 2.13
LPCAT1-203ENST00000503252 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
LPCAT1-203ENST00000503252 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
LPCAT1-203ENST00000503252 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
LPCAT1-203ENST00000503252 IGF1RP08069 1367 aa28.32■■■□□ 2.12
LPCAT1-203ENST00000503252 NESP48681 1621 aa28.28■■■□□ 2.12
LPCAT1-203ENST00000503252 HNRNPUL2Q1KMD3 747 aaKnown RBP28.22■■■□□ 2.11
LPCAT1-203ENST00000503252 CARMIL1Q5VZK9 1371 aa28.18■■■□□ 2.1
LPCAT1-203ENST00000503252 ARHGAP35Q9NRY4 1499 aa28.18■■■□□ 2.1
LPCAT1-203ENST00000503252 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
LPCAT1-203ENST00000503252 TOPBP1Q92547 1522 aa28.14■■■□□ 2.1
LPCAT1-203ENST00000503252 RAD54L2Q9Y4B4 1467 aa28.13■■■□□ 2.09
LPCAT1-203ENST00000503252 KANK4Q5T7N3 995 aaPredicted RBP28.11■■■□□ 2.09
LPCAT1-203ENST00000503252 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
LPCAT1-203ENST00000503252 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
LPCAT1-203ENST00000503252 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
LPCAT1-203ENST00000503252 ABCA10Q8WWZ4 1543 aa28.05■■■□□ 2.08
LPCAT1-203ENST00000503252 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
LPCAT1-203ENST00000503252 PDS5BQ9NTI5 1447 aa27.89■■■□□ 2.05
LPCAT1-203ENST00000503252 RRBP1Q9P2E9 1410 aaKnown RBP27.85■■■□□ 2.05
LPCAT1-203ENST00000503252 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
LPCAT1-203ENST00000503252 CUL7Q14999 1698 aa27.83■■■□□ 2.05
LPCAT1-203ENST00000503252 P3H3Q8IVL6 736 aa27.83■■■□□ 2.05
LPCAT1-203ENST00000503252 KIF21AQ7Z4S6 1674 aa27.8■■■□□ 2.04
LPCAT1-203ENST00000503252 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
LPCAT1-203ENST00000503252 TIAM1Q13009 1591 aa27.79■■■□□ 2.04
LPCAT1-203ENST00000503252 MAP3K1Q13233 1512 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms