RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 CC2D2AQ9P2K1 1620 aa7.59□□□□□ -1.19
CLDND1-208ENST00000503004 IGF1RP08069 1367 aa7.59□□□□□ -1.19
CLDND1-208ENST00000503004 FGD5Q6ZNL6 1462 aa7.58□□□□□ -1.2
CLDND1-208ENST00000503004 ARHGAP35Q9NRY4 1499 aa7.58□□□□□ -1.2
CLDND1-208ENST00000503004 ZNF316A6NFI3 1004 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-208ENST00000503004 CARMIL1Q5VZK9 1371 aa7.56□□□□□ -1.2
CLDND1-208ENST00000503004 ITGAEP38570 1179 aa7.56□□□□□ -1.2
CLDND1-208ENST00000503004 BCANQ96GW7 911 aa7.56□□□□□ -1.2
CLDND1-208ENST00000503004 ANO8Q9HCE9 1232 aaPredicted RBP7.56□□□□□ -1.2
CLDND1-208ENST00000503004 FANCD2Q9BXW9 1451 aa7.55□□□□□ -1.2
CLDND1-208ENST00000503004 P3H3Q8IVL6 736 aa7.55□□□□□ -1.2
CLDND1-208ENST00000503004 NESP48681 1621 aa7.55□□□□□ -1.2
CLDND1-208ENST00000503004 PRDM2Q13029 1718 aa7.55□□□□□ -1.2
CLDND1-208ENST00000503004 RAD54L2Q9Y4B4 1467 aa7.54□□□□□ -1.2
CLDND1-208ENST00000503004 DNAJC5BQ9UF47 199 aa7.53□□□□□ -1.2
CLDND1-208ENST00000503004 DHX57Q6P158 1386 aaKnown RBP7.52□□□□□ -1.21
CLDND1-208ENST00000503004 ATP1B4Q9UN42 357 aaPredicted RBP7.52□□□□□ -1.21
CLDND1-208ENST00000503004 RRBP1Q9P2E9 1410 aaKnown RBP7.51□□□□□ -1.21
CLDND1-208ENST00000503004 CCNB3Q8WWL7 1395 aa7.51□□□□□ -1.21
CLDND1-208ENST00000503004 TSHZ2Q9NRE2 1034 aa7.51□□□□□ -1.21
CLDND1-208ENST00000503004 POLA1P09884 1462 aaPredicted RBP7.5□□□□□ -1.21
CLDND1-208ENST00000503004 MIER1Q8N108 512 aa7.5□□□□□ -1.21
CLDND1-208ENST00000503004 TOPBP1Q92547 1522 aa7.49□□□□□ -1.21
CLDND1-208ENST00000503004 TULP1O00294 542 aaPredicted RBP7.48□□□□□ -1.21
CLDND1-208ENST00000503004 FHOD3Q2V2M9 1422 aa7.47□□□□□ -1.21
CLDND1-208ENST00000503004 ADRA2BP18089 450 aa7.47□□□□□ -1.21
CLDND1-208ENST00000503004 PLCB2Q00722 1185 aa7.47□□□□□ -1.21
CLDND1-208ENST00000503004 DNMBPQ6XZF7 1577 aa7.47□□□□□ -1.21
CLDND1-208ENST00000503004 TIAM1Q13009 1591 aa7.47□□□□□ -1.21
CLDND1-208ENST00000503004 PHLDB1Q86UU1 1377 aa7.47□□□□□ -1.21
CLDND1-208ENST00000503004 ABCA10Q8WWZ4 1543 aa7.46□□□□□ -1.21
CLDND1-208ENST00000503004 TDRD9Q8NDG6 1382 aaKnown RBP7.46□□□□□ -1.21
CLDND1-208ENST00000503004 FAM50AQ14320 339 aaKnown RBP7.46□□□□□ -1.22
CLDND1-208ENST00000503004 LRRC9Q6ZRR7 1453 aa7.46□□□□□ -1.22
CLDND1-208ENST00000503004 CLSPNQ9HAW4 1339 aa7.45□□□□□ -1.22
CLDND1-208ENST00000503004 ZBTB22O15209 634 aa7.45□□□□□ -1.22
CLDND1-208ENST00000503004 TPRNQ4KMQ1 711 aa7.45□□□□□ -1.22
CLDND1-208ENST00000503004 UBE2Q2Q8WVN8 375 aa7.45□□□□□ -1.22
CLDND1-208ENST00000503004 RAB3GAP2Q9H2M9 1393 aa7.45□□□□□ -1.22
CLDND1-208ENST00000503004 URB2Q14146 1524 aaKnown RBP7.44□□□□□ -1.22
CLDND1-208ENST00000503004 FHAD1B1AJZ9 1412 aa7.44□□□□□ -1.22
CLDND1-208ENST00000503004 PCF11O94913 1555 aaKnown RBP7.44□□□□□ -1.22
CLDND1-208ENST00000503004 EIF5BO60841 1220 aaKnown RBP7.44□□□□□ -1.22
CLDND1-208ENST00000503004 HOMEZQ8IX15 550 aa7.44□□□□□ -1.22
CLDND1-208ENST00000503004 MAP3K1Q13233 1512 aa7.41□□□□□ -1.22
CLDND1-208ENST00000503004 LAMC3Q9Y6N6 1575 aa7.41□□□□□ -1.22
CLDND1-208ENST00000503004 SALL2Q9Y467 1007 aaPredicted RBP7.4□□□□□ -1.22
CLDND1-208ENST00000503004 SIN3AQ96ST3 1273 aa7.4□□□□□ -1.23
CLDND1-208ENST00000503004 GAPVD1Q14C86 1478 aa7.39□□□□□ -1.23
CLDND1-208ENST00000503004 PLEKHG5O94827 1062 aa7.39□□□□□ -1.23
CLDND1-208ENST00000503004 SETD5Q9C0A6 1442 aa7.39□□□□□ -1.23
CLDND1-208ENST00000503004 PDS5BQ9NTI5 1447 aa7.39□□□□□ -1.23
CLDND1-208ENST00000503004 MAPKBP1O60336 1514 aa7.39□□□□□ -1.23
CLDND1-208ENST00000503004 CUL7Q14999 1698 aa7.39□□□□□ -1.23
CLDND1-208ENST00000503004 CASKIN1Q8WXD9 1431 aa7.39□□□□□ -1.23
CLDND1-208ENST00000503004 FYCO1Q9BQS8 1478 aa7.38□□□□□ -1.23
CLDND1-208ENST00000503004 SUPT16HQ9Y5B9 1047 aaKnown RBP7.38□□□□□ -1.23
CLDND1-208ENST00000503004 EFCAB5A4FU69 1503 aa7.38□□□□□ -1.23
CLDND1-208ENST00000503004 CFAP43Q8NDM7 1665 aa7.38□□□□□ -1.23
CLDND1-208ENST00000503004 CCDC136Q96JN2 1154 aa7.37□□□□□ -1.23
CLDND1-208ENST00000503004 WDR97A6NE52 1622 aa7.37□□□□□ -1.23
CLDND1-208ENST00000503004 MTUS2Q5JR59 1369 aa7.37□□□□□ -1.23
CLDND1-208ENST00000503004 FMN1Q68DA7 1419 aa7.37□□□□□ -1.23
CLDND1-208ENST00000503004 CTTNBP2Q8WZ74 1663 aa7.37□□□□□ -1.23
CLDND1-208ENST00000503004 KIF21AQ7Z4S6 1674 aa7.36□□□□□ -1.23
CLDND1-208ENST00000503004 ABCA5Q8WWZ7 1642 aa7.36□□□□□ -1.23
CLDND1-208ENST00000503004 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
CLDND1-208ENST00000503004 ARID3CA6NKF2 412 aa7.35□□□□□ -1.23
CLDND1-208ENST00000503004 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.231e-6■■■■□ 26.1
CLDND1-208ENST00000503004 HAP1P54257 671 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-208ENST00000503004 FGD6Q6ZV73 1430 aa7.34□□□□□ -1.23
CLDND1-208ENST00000503004 HIRIP3Q9BW71 556 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-208ENST00000503004 PTPRKQ15262 1439 aa7.33□□□□□ -1.24
CLDND1-208ENST00000503004 TARBP1Q13395 1621 aaKnown RBP7.32□□□□□ -1.24
CLDND1-208ENST00000503004 SAMD9Q5K651 1589 aa7.32□□□□□ -1.24
CLDND1-208ENST00000503004 LRRIQ1Q96JM4 1722 aa7.31□□□□□ -1.24
CLDND1-208ENST00000503004 KCNH8Q96L42 1107 aa7.31□□□□□ -1.24
CLDND1-208ENST00000503004 NCOA2Q15596 1464 aa7.31□□□□□ -1.24
CLDND1-208ENST00000503004 GRIN2BQ13224 1484 aa7.31□□□□□ -1.24
CLDND1-208ENST00000503004 CHIC2Q9UKJ5 165 aa7.3□□□□□ -1.24
CLDND1-208ENST00000503004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLDND1-208ENST00000503004 DDX10Q13206 875 aaKnown RBP7.3□□□□□ -1.24
CLDND1-208ENST00000503004 MSH5O43196 834 aa7.29□□□□□ -1.24
CLDND1-208ENST00000503004 MYOM3Q5VTT5 1437 aa7.29□□□□□ -1.24
CLDND1-208ENST00000503004 MAGI3Q5TCQ9 1506 aa7.29□□□□□ -1.24
CLDND1-208ENST00000503004 CCDC18Q5T9S5 1454 aa7.29□□□□□ -1.24
CLDND1-208ENST00000503004 ZNF608Q9ULD9 1512 aaPredicted RBP7.29□□□□□ -1.24
CLDND1-208ENST00000503004 RRP7BPQ9NSQ0 103 aa7.28□□□□□ -1.24
CLDND1-208ENST00000503004 PPP1R15AO75807 674 aaPredicted RBP7.28□□□□□ -1.24
CLDND1-208ENST00000503004 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
CLDND1-208ENST00000503004 HFM1A2PYH4 1435 aa7.28□□□□□ -1.24
CLDND1-208ENST00000503004 NAIPQ13075 1403 aa7.27□□□□□ -1.25
CLDND1-208ENST00000503004 MRC2Q9UBG0 1479 aa7.27□□□□□ -1.25
CLDND1-208ENST00000503004 CDK13Q14004 1512 aaKnown RBP7.26□□□□□ -1.25
CLDND1-208ENST00000503004 IQGAP2Q13576 1575 aa7.26□□□□□ -1.25
CLDND1-208ENST00000503004 PBRM1Q86U86 1689 aa7.26□□□□□ -1.25
CLDND1-208ENST00000503004 DEKP35659 375 aaKnown RBP7.26□□□□□ -1.25
CLDND1-208ENST00000503004 TONSLQ96HA7 1378 aa7.26□□□□□ -1.25
CLDND1-208ENST00000503004 VSIG10Q8N0Z9 540 aa7.26□□□□□ -1.25
CLDND1-208ENST00000503004 EHBP1L1Q8N3D4 1523 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms