RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
SFXN1-204ENST00000502865 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
SFXN1-204ENST00000502865 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
SFXN1-204ENST00000502865 CHMP7Q8WUX9 453 aaPredicted RBP15.61■□□□□ 0.09
SFXN1-204ENST00000502865 FBLN2P98095 1184 aa15.6■□□□□ 0.09
SFXN1-204ENST00000502865 CLIP1P30622 1438 aa15.59■□□□□ 0.09
SFXN1-204ENST00000502865 CHD1O14646 1710 aa15.57■□□□□ 0.08
SFXN1-204ENST00000502865 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
SFXN1-204ENST00000502865 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
SFXN1-204ENST00000502865 NUP160Q12769 1436 aa15.53■□□□□ 0.08
SFXN1-204ENST00000502865 IQGAP2Q13576 1575 aa15.51■□□□□ 0.07
SFXN1-204ENST00000502865 KIAA0586Q9BVV6 1533 aa15.51■□□□□ 0.07
SFXN1-204ENST00000502865 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
SFXN1-204ENST00000502865 P3H3Q8IVL6 736 aa15.47■□□□□ 0.07
SFXN1-204ENST00000502865 SAMD9Q5K651 1589 aa15.46■□□□□ 0.07
SFXN1-204ENST00000502865 UGGT2Q9NYU1 1516 aa15.45■□□□□ 0.06
SFXN1-204ENST00000502865 EFCAB5A4FU69 1503 aa15.44■□□□□ 0.06
SFXN1-204ENST00000502865 FHOD3Q2V2M9 1422 aa15.43■□□□□ 0.06
SFXN1-204ENST00000502865 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
SFXN1-204ENST00000502865 DISP1Q96F81 1524 aa15.4■□□□□ 0.06
SFXN1-204ENST00000502865 JPH4Q96JJ6 628 aa15.4■□□□□ 0.06
SFXN1-204ENST00000502865 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
SFXN1-204ENST00000502865 FOXD1Q16676 465 aa15.38■□□□□ 0.05
SFXN1-204ENST00000502865 KIAA0556O60303 1618 aa15.37■□□□□ 0.05
SFXN1-204ENST00000502865 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
SFXN1-204ENST00000502865 PRG4Q92954 1404 aaPredicted RBP15.33■□□□□ 0.04
SFXN1-204ENST00000502865 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
SFXN1-204ENST00000502865 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
SFXN1-204ENST00000502865 PCF11O94913 1555 aaKnown RBP15.31■□□□□ 0.04
SFXN1-204ENST00000502865 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
SFXN1-204ENST00000502865 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
SFXN1-204ENST00000502865 FMN1Q68DA7 1419 aa15.29■□□□□ 0.04
SFXN1-204ENST00000502865 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
SFXN1-204ENST00000502865 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.04
SFXN1-204ENST00000502865 LRRIQ1Q96JM4 1722 aa15.24■□□□□ 0.03
SFXN1-204ENST00000502865 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
SFXN1-204ENST00000502865 FYCO1Q9BQS8 1478 aa15.24■□□□□ 0.03
SFXN1-204ENST00000502865 APLP2Q06481 763 aa15.22■□□□□ 0.03
SFXN1-204ENST00000502865 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
SFXN1-204ENST00000502865 RAPGEF6Q8TEU7 1601 aa15.2■□□□□ 0.02
SFXN1-204ENST00000502865 PLB1Q6P1J6 1458 aa15.2■□□□□ 0.02
SFXN1-204ENST00000502865 TIAM1Q13009 1591 aa15.19■□□□□ 0.02
SFXN1-204ENST00000502865 PTPRGP23470 1445 aa15.19■□□□□ 0.02
SFXN1-204ENST00000502865 MAP3K1Q13233 1512 aa15.18■□□□□ 0.02
SFXN1-204ENST00000502865 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
SFXN1-204ENST00000502865 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
SFXN1-204ENST00000502865 ABCA8O94911 1581 aa15.17■□□□□ 0.02
SFXN1-204ENST00000502865 NUP153P49790 1475 aaKnown RBP15.16■□□□□ 0.02
SFXN1-204ENST00000502865 EPRSP07814 1512 aaKnown RBP15.14■□□□□ 0.01
SFXN1-204ENST00000502865 ARID3CA6NKF2 412 aa15.14■□□□□ 0.01
SFXN1-204ENST00000502865 CDK13Q14004 1512 aaKnown RBP15.13■□□□□ 0.01
SFXN1-204ENST00000502865 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
SFXN1-204ENST00000502865 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
SFXN1-204ENST00000502865 CCDC18Q5T9S5 1454 aa15.11■□□□□ 0.01
SFXN1-204ENST00000502865 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
SFXN1-204ENST00000502865 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
SFXN1-204ENST00000502865 ATP10BO94823 1461 aa15.08■□□□□ 0
SFXN1-204ENST00000502865 ARHGEF11O15085 1522 aa15.07■□□□□ 0
SFXN1-204ENST00000502865 ABCC2Q92887 1545 aa15.07■□□□□ 0
SFXN1-204ENST00000502865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
SFXN1-204ENST00000502865 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
SFXN1-204ENST00000502865 UHRF1BP1LA0JNW5 1464 aa15.04■□□□□ -0
SFXN1-204ENST00000502865 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
SFXN1-204ENST00000502865 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
SFXN1-204ENST00000502865 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
SFXN1-204ENST00000502865 MTUS2Q5JR59 1369 aa15.03■□□□□ -0
SFXN1-204ENST00000502865 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
SFXN1-204ENST00000502865 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
SFXN1-204ENST00000502865 EHBP1L1Q8N3D4 1523 aa15.02■□□□□ -0
SFXN1-204ENST00000502865 ZCCHC11Q5TAX3 1644 aaKnown RBP14.99□□□□□ -0.01
SFXN1-204ENST00000502865 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
SFXN1-204ENST00000502865 KDM5BQ9UGL1 1544 aa14.99□□□□□ -0.01
SFXN1-204ENST00000502865 SUPT6HQ7KZ85 1726 aaKnown RBP14.98□□□□□ -0.01
SFXN1-204ENST00000502865 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
SFXN1-204ENST00000502865 CDK11AQ9UQ88 783 aaPredicted RBP14.98□□□□□ -0.01
SFXN1-204ENST00000502865 TROQ12816 1431 aaPredicted RBP14.97□□□□□ -0.01
SFXN1-204ENST00000502865 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
SFXN1-204ENST00000502865 KIF14Q15058 1648 aa14.95□□□□□ -0.02
SFXN1-204ENST00000502865 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
SFXN1-204ENST00000502865 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
SFXN1-204ENST00000502865 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
SFXN1-204ENST00000502865 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
SFXN1-204ENST00000502865 ABCC10Q5T3U5 1492 aa14.89□□□□□ -0.03
SFXN1-204ENST00000502865 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
SFXN1-204ENST00000502865 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
SFXN1-204ENST00000502865 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
SFXN1-204ENST00000502865 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
SFXN1-204ENST00000502865 GPATCH8Q9UKJ3 1502 aaKnown RBP14.85□□□□□ -0.03
SFXN1-204ENST00000502865 ASXL2Q76L83 1435 aa14.84□□□□□ -0.03
SFXN1-204ENST00000502865 CDC42BPAQ5VT25 1732 aa14.84□□□□□ -0.03
SFXN1-204ENST00000502865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.84□□□□□ -0.03
SFXN1-204ENST00000502865 FAM50AQ14320 339 aaKnown RBP14.84□□□□□ -0.03
SFXN1-204ENST00000502865 WDR7Q9Y4E6 1490 aa14.83□□□□□ -0.03
SFXN1-204ENST00000502865 TTC37Q6PGP7 1564 aa14.83□□□□□ -0.04
SFXN1-204ENST00000502865 PTPN23Q9H3S7 1636 aa14.83□□□□□ -0.04
SFXN1-204ENST00000502865 MIA2Q96PC5 1412 aa14.82□□□□□ -0.04
SFXN1-204ENST00000502865 TCOF1Q13428 1488 aaKnown RBP14.81□□□□□ -0.04
SFXN1-204ENST00000502865 ITSN2Q9NZM3 1697 aa14.81□□□□□ -0.04
SFXN1-204ENST00000502865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.04
SFXN1-204ENST00000502865 CDC42BPBQ9Y5S2 1711 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms