RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 NISCHQ9Y2I1 1504 aa22.63■■□□□ 1.21
SFXN1-204ENST00000502865 CCDC180Q9P1Z9 1646 aa19.82■□□□□ 0.76
SFXN1-204ENST00000502865 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-204ENST00000502865 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
SFXN1-204ENST00000502865 ABCC9O60706 1549 aa18.95■□□□□ 0.62
SFXN1-204ENST00000502865 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
SFXN1-204ENST00000502865 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
SFXN1-204ENST00000502865 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
SFXN1-204ENST00000502865 NACADO15069 1562 aa18.51■□□□□ 0.55
SFXN1-204ENST00000502865 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
SFXN1-204ENST00000502865 SHROOM4Q9ULL8 1493 aa18.32■□□□□ 0.52
SFXN1-204ENST00000502865 SCRIBQ14160 1630 aa18.21■□□□□ 0.51
SFXN1-204ENST00000502865 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
SFXN1-204ENST00000502865 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.48
SFXN1-204ENST00000502865 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
SFXN1-204ENST00000502865 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
SFXN1-204ENST00000502865 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
SFXN1-204ENST00000502865 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
SFXN1-204ENST00000502865 SUPT5HO00267 1087 aaKnown RBP17.51■□□□□ 0.39
SFXN1-204ENST00000502865 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
SFXN1-204ENST00000502865 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-204ENST00000502865 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
SFXN1-204ENST00000502865 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
SFXN1-204ENST00000502865 WIZO95785 1651 aa17.35■□□□□ 0.37
SFXN1-204ENST00000502865 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
SFXN1-204ENST00000502865 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
SFXN1-204ENST00000502865 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
SFXN1-204ENST00000502865 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
SFXN1-204ENST00000502865 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
SFXN1-204ENST00000502865 CC2D2AQ9P2K1 1620 aa17.15■□□□□ 0.34
SFXN1-204ENST00000502865 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
SFXN1-204ENST00000502865 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
SFXN1-204ENST00000502865 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
SFXN1-204ENST00000502865 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
SFXN1-204ENST00000502865 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
SFXN1-204ENST00000502865 CFTRP13569 1480 aa16.65■□□□□ 0.26
SFXN1-204ENST00000502865 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
SFXN1-204ENST00000502865 NESP48681 1621 aa16.59■□□□□ 0.25
SFXN1-204ENST00000502865 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
SFXN1-204ENST00000502865 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
SFXN1-204ENST00000502865 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
SFXN1-204ENST00000502865 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
SFXN1-204ENST00000502865 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
SFXN1-204ENST00000502865 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
SFXN1-204ENST00000502865 SENP3Q9H4L4 574 aaPredicted RBP16.41■□□□□ 0.22
SFXN1-204ENST00000502865 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
SFXN1-204ENST00000502865 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
SFXN1-204ENST00000502865 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
SFXN1-204ENST00000502865 CUX1P39880 1505 aa16.37■□□□□ 0.21
SFXN1-204ENST00000502865 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
SFXN1-204ENST00000502865 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
SFXN1-204ENST00000502865 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
SFXN1-204ENST00000502865 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
SFXN1-204ENST00000502865 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
SFXN1-204ENST00000502865 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
SFXN1-204ENST00000502865 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
SFXN1-204ENST00000502865 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
SFXN1-204ENST00000502865 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
SFXN1-204ENST00000502865 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
SFXN1-204ENST00000502865 SOGA1O94964 1423 aa16.2■□□□□ 0.18
SFXN1-204ENST00000502865 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
SFXN1-204ENST00000502865 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
SFXN1-204ENST00000502865 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
SFXN1-204ENST00000502865 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
SFXN1-204ENST00000502865 WDR62O43379 1518 aa16.14■□□□□ 0.18
SFXN1-204ENST00000502865 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
SFXN1-204ENST00000502865 CUX2O14529 1486 aa16.07■□□□□ 0.16
SFXN1-204ENST00000502865 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
SFXN1-204ENST00000502865 EEA1Q15075 1411 aa16.05■□□□□ 0.16
SFXN1-204ENST00000502865 LOC105371045A0A1W2PR82 267 aa16.05■□□□□ 0.16
SFXN1-204ENST00000502865 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
SFXN1-204ENST00000502865 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
SFXN1-204ENST00000502865 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
SFXN1-204ENST00000502865 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
SFXN1-204ENST00000502865 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
SFXN1-204ENST00000502865 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
SFXN1-204ENST00000502865 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
SFXN1-204ENST00000502865 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
SFXN1-204ENST00000502865 IGF1RP08069 1367 aa15.95■□□□□ 0.14
SFXN1-204ENST00000502865 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
SFXN1-204ENST00000502865 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.142e-9■■■□□ 19.1
SFXN1-204ENST00000502865 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
SFXN1-204ENST00000502865 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
SFXN1-204ENST00000502865 KIF21BO75037 1637 aa15.9■□□□□ 0.14
SFXN1-204ENST00000502865 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
SFXN1-204ENST00000502865 RAPGEF2Q9Y4G8 1499 aa15.86■□□□□ 0.13
SFXN1-204ENST00000502865 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
SFXN1-204ENST00000502865 CARMIL1Q5VZK9 1371 aa15.85■□□□□ 0.13
SFXN1-204ENST00000502865 GOLGA3Q08378 1498 aa15.84■□□□□ 0.13
SFXN1-204ENST00000502865 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
SFXN1-204ENST00000502865 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
SFXN1-204ENST00000502865 CUL7Q14999 1698 aa15.8■□□□□ 0.12
SFXN1-204ENST00000502865 UBTFP17480 764 aaKnown RBP15.79■□□□□ 0.12
SFXN1-204ENST00000502865 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
SFXN1-204ENST00000502865 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
SFXN1-204ENST00000502865 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
SFXN1-204ENST00000502865 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
SFXN1-204ENST00000502865 MAGI1Q96QZ7 1491 aaPredicted RBP15.69■□□□□ 0.1
SFXN1-204ENST00000502865 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
SFXN1-204ENST00000502865 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms