RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
PRKCB-210ENST00000498739 PRXQ9BXM0 1461 aa27.95■■■□□ 2.07
PRKCB-210ENST00000498739 KIAA0586Q9BVV6 1533 aa27.95■■■□□ 2.06
PRKCB-210ENST00000498739 SHROOM2Q13796 1616 aa27.95■■■□□ 2.06
PRKCB-210ENST00000498739 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
PRKCB-210ENST00000498739 ARAP1Q96P48 1450 aa27.89■■■□□ 2.06
PRKCB-210ENST00000498739 ERCC6L2Q5T890 1561 aa27.88■■■□□ 2.05
PRKCB-210ENST00000498739 PRG4Q92954 1404 aaPredicted RBP27.85■■■□□ 2.05
PRKCB-210ENST00000498739 CYB5RLQ6IPT4 315 aa27.85■■■□□ 2.05
PRKCB-210ENST00000498739 IQGAP2Q13576 1575 aa27.83■■■□□ 2.05
PRKCB-210ENST00000498739 CTTNBP2Q8WZ74 1663 aa27.77■■■□□ 2.04
PRKCB-210ENST00000498739 KIF21BO75037 1637 aa27.73■■■□□ 2.03
PRKCB-210ENST00000498739 UGGT2Q9NYU1 1516 aa27.67■■■□□ 2.02
PRKCB-210ENST00000498739 CARMIL2Q6F5E8 1435 aa27.67■■■□□ 2.02
PRKCB-210ENST00000498739 EHMT2Q96KQ7 1210 aa27.63■■■□□ 2.01
PRKCB-210ENST00000498739 DISP1Q96F81 1524 aa27.62■■■□□ 2.01
PRKCB-210ENST00000498739 GOLGA3Q08378 1498 aa27.59■■■□□ 2.01
PRKCB-210ENST00000498739 KIAA0556O60303 1618 aa27.57■■■□□ 2
PRKCB-210ENST00000498739 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
PRKCB-210ENST00000498739 TNIKQ9UKE5 1360 aa27.56■■■□□ 2
PRKCB-210ENST00000498739 PTPRGP23470 1445 aa27.53■■■□□ 2
PRKCB-210ENST00000498739 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
PRKCB-210ENST00000498739 RANGAP1P46060 587 aaPredicted RBP27.47■■□□□ 1.99
PRKCB-210ENST00000498739 SAMD9Q5K651 1589 aa27.41■■□□□ 1.98
PRKCB-210ENST00000498739 P3H3Q8IVL6 736 aa27.41■■□□□ 1.98
PRKCB-210ENST00000498739 ADCY10Q96PN6 1610 aa27.41■■□□□ 1.98
PRKCB-210ENST00000498739 UACAQ9BZF9 1416 aa27.35■■□□□ 1.97
PRKCB-210ENST00000498739 NPM1P06748 294 aaKnown RBP eCLIP27.33■■□□□ 1.97
PRKCB-210ENST00000498739 EFCAB5A4FU69 1503 aa27.32■■□□□ 1.96
PRKCB-210ENST00000498739 UHRF1BP1LA0JNW5 1464 aa27.31■■□□□ 1.96
PRKCB-210ENST00000498739 ABCC2Q92887 1545 aa27.31■■□□□ 1.96
PRKCB-210ENST00000498739 FHOD3Q2V2M9 1422 aa27.29■■□□□ 1.96
PRKCB-210ENST00000498739 PLB1Q6P1J6 1458 aa27.29■■□□□ 1.96
PRKCB-210ENST00000498739 TRHP20396 242 aaPredicted RBP27.28■■□□□ 1.96
PRKCB-210ENST00000498739 ABCA8O94911 1581 aa27.24■■□□□ 1.95
PRKCB-210ENST00000498739 ARHGAP35Q9NRY4 1499 aa27.21■■□□□ 1.95
PRKCB-210ENST00000498739 MAPKBP1O60336 1514 aa27.2■■□□□ 1.94
PRKCB-210ENST00000498739 KDM5BQ9UGL1 1544 aa27.17■■□□□ 1.94
PRKCB-210ENST00000498739 ZCCHC11Q5TAX3 1644 aaKnown RBP27.15■■□□□ 1.94
PRKCB-210ENST00000498739 RAPGEF6Q8TEU7 1601 aa27.14■■□□□ 1.94
PRKCB-210ENST00000498739 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
PRKCB-210ENST00000498739 CLIP1P30622 1438 aa27.1■■□□□ 1.93
PRKCB-210ENST00000498739 ASXL2Q76L83 1435 aa27.09■■□□□ 1.93
PRKCB-210ENST00000498739 ARID3CA6NKF2 412 aa27.08■■□□□ 1.93
PRKCB-210ENST00000498739 FMN1Q68DA7 1419 aa27.07■■□□□ 1.92
PRKCB-210ENST00000498739 ABCC10Q5T3U5 1492 aa27.06■■□□□ 1.92
PRKCB-210ENST00000498739 NUP153P49790 1475 aaKnown RBP27.03■■□□□ 1.92
PRKCB-210ENST00000498739 DIP2BQ9P265 1576 aa27.03■■□□□ 1.92
PRKCB-210ENST00000498739 ATP10BO94823 1461 aa27.02■■□□□ 1.92
PRKCB-210ENST00000498739 FAM69CQ0P6D2 419 aa27.02■■□□□ 1.92
PRKCB-210ENST00000498739 KIF13AQ9H1H9 1805 aa27.02■■□□□ 1.92
PRKCB-210ENST00000498739 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
PRKCB-210ENST00000498739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.98■■□□□ 1.91
PRKCB-210ENST00000498739 HNRNPUL2Q1KMD3 747 aaKnown RBP26.98■■□□□ 1.91
PRKCB-210ENST00000498739 WDR7Q9Y4E6 1490 aa26.98■■□□□ 1.91
PRKCB-210ENST00000498739 ATP1B4Q9UN42 357 aaPredicted RBP26.96■■□□□ 1.91
PRKCB-210ENST00000498739 HECW1Q76N89 1606 aa26.95■■□□□ 1.91
PRKCB-210ENST00000498739 EPRSP07814 1512 aaKnown RBP26.93■■□□□ 1.9
PRKCB-210ENST00000498739 PCF11O94913 1555 aaKnown RBP26.89■■□□□ 1.9
PRKCB-210ENST00000498739 GLI2P10070 1586 aa26.89■■□□□ 1.9
PRKCB-210ENST00000498739 KCNH8Q96L42 1107 aa26.88■■□□□ 1.89
PRKCB-210ENST00000498739 CDK13Q14004 1512 aaKnown RBP26.88■■□□□ 1.89
PRKCB-210ENST00000498739 CASKIN1Q8WXD9 1431 aa26.87■■□□□ 1.89
PRKCB-210ENST00000498739 FYCO1Q9BQS8 1478 aa26.81■■□□□ 1.88
PRKCB-210ENST00000498739 PLEKHD1A6NEE1 506 aa26.81■■□□□ 1.88
PRKCB-210ENST00000498739 MAP3K4Q9Y6R4 1608 aa26.79■■□□□ 1.88
PRKCB-210ENST00000498739 LRRIQ1Q96JM4 1722 aa26.79■■□□□ 1.88
PRKCB-210ENST00000498739 TSPOAP1O95153 1857 aa26.79■■□□□ 1.88
PRKCB-210ENST00000498739 CCDC18Q5T9S5 1454 aa26.76■■□□□ 1.87
PRKCB-210ENST00000498739 CFAP43Q8NDM7 1665 aa26.73■■□□□ 1.87
PRKCB-210ENST00000498739 CDK11AQ9UQ88 783 aaPredicted RBP26.73■■□□□ 1.87
PRKCB-210ENST00000498739 PPRC1Q5VV67 1664 aaKnown RBP26.71■■□□□ 1.87
PRKCB-210ENST00000498739 CD109Q6YHK3 1445 aa26.71■■□□□ 1.87
PRKCB-210ENST00000498739 ABCA9Q8IUA7 1624 aa26.69■■□□□ 1.86
PRKCB-210ENST00000498739 VPS8Q8N3P4 1428 aa26.67■■□□□ 1.86
PRKCB-210ENST00000498739 TEX14Q8IWB6 1497 aa26.66■■□□□ 1.86
PRKCB-210ENST00000498739 TROQ12816 1431 aaPredicted RBP26.65■■□□□ 1.86
PRKCB-210ENST00000498739 MAGI3Q5TCQ9 1506 aa26.64■■□□□ 1.85
PRKCB-210ENST00000498739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.63■■□□□ 1.85
PRKCB-210ENST00000498739 TTC37Q6PGP7 1564 aa26.6■■□□□ 1.85
PRKCB-210ENST00000498739 KIF14Q15058 1648 aa26.6■■□□□ 1.85
PRKCB-210ENST00000498739 KDM6BO15054 1643 aa26.58■■□□□ 1.85
PRKCB-210ENST00000498739 MTUS2Q5JR59 1369 aa26.51■■□□□ 1.83
PRKCB-210ENST00000498739 TIAM1Q13009 1591 aa26.49■■□□□ 1.83
PRKCB-210ENST00000498739 EHBP1L1Q8N3D4 1523 aa26.46■■□□□ 1.83
PRKCB-210ENST00000498739 NEO1Q92859 1461 aa26.46■■□□□ 1.83
PRKCB-210ENST00000498739 COL17A1Q9UMD9 1497 aaPredicted RBP26.46■■□□□ 1.83
PRKCB-210ENST00000498739 PLCH2O75038 1416 aa26.46■■□□□ 1.83
PRKCB-210ENST00000498739 MYO5CQ9NQX4 1742 aa26.45■■□□□ 1.83
PRKCB-210ENST00000498739 FANCAO15360 1455 aa26.44■■□□□ 1.82
PRKCB-210ENST00000498739 PHLDB1Q86UU1 1377 aa26.43■■□□□ 1.82
PRKCB-210ENST00000498739 CFAP74Q9C0B2 1584 aa26.42■■□□□ 1.82
PRKCB-210ENST00000498739 MAP3K1Q13233 1512 aa26.39■■□□□ 1.82
PRKCB-210ENST00000498739 ARAP3Q8WWN8 1544 aa26.39■■□□□ 1.82
PRKCB-210ENST00000498739 ARHGAP5Q13017 1502 aa26.39■■□□□ 1.81
PRKCB-210ENST00000498739 AKNAQ7Z591 1439 aa26.39■■□□□ 1.81
PRKCB-210ENST00000498739 APLP2Q06481 763 aa26.38■■□□□ 1.81
PRKCB-210ENST00000498739 LRRC9Q6ZRR7 1453 aa26.36■■□□□ 1.81
PRKCB-210ENST00000498739 PREX2Q70Z35 1606 aa26.36■■□□□ 1.81
PRKCB-210ENST00000498739 EFCAB2Q5VUJ9 269 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms