RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 PRXQ9BXM0 1461 aa33.02■■■□□ 2.88
HLA-B-255ENST00000498007 SHROOM2Q13796 1616 aa33.02■■■□□ 2.88
HLA-B-255ENST00000498007 CSRNP3Q8WYN3 585 aa33■■■□□ 2.87
HLA-B-255ENST00000498007 KIAA0586Q9BVV6 1533 aa32.97■■■□□ 2.87
HLA-B-255ENST00000498007 ERCC6L2Q5T890 1561 aa32.92■■■□□ 2.86
HLA-B-255ENST00000498007 ARAP1Q96P48 1450 aa32.91■■■□□ 2.86
HLA-B-255ENST00000498007 IQGAP2Q13576 1575 aa32.9■■■□□ 2.86
HLA-B-255ENST00000498007 CTTNBP2Q8WZ74 1663 aa32.9■■■□□ 2.86
HLA-B-255ENST00000498007 JPH4Q96JJ6 628 aa32.86■■■□□ 2.85
HLA-B-255ENST00000498007 PRG4Q92954 1404 aaPredicted RBP32.85■■■□□ 2.85
HLA-B-255ENST00000498007 KIF21BO75037 1637 aa32.82■■■□□ 2.84
HLA-B-255ENST00000498007 CYB5RLQ6IPT4 315 aa32.79■■■□□ 2.84
HLA-B-255ENST00000498007 UGGT2Q9NYU1 1516 aa32.67■■■□□ 2.82
HLA-B-255ENST00000498007 EHMT2Q96KQ7 1210 aa32.66■■■□□ 2.82
HLA-B-255ENST00000498007 GOLGA3Q08378 1498 aa32.63■■■□□ 2.81
HLA-B-255ENST00000498007 CARMIL2Q6F5E8 1435 aa32.63■■■□□ 2.81
HLA-B-255ENST00000498007 DISP1Q96F81 1524 aa32.61■■■□□ 2.81
HLA-B-255ENST00000498007 KIAA0556O60303 1618 aa32.59■■■□□ 2.81
HLA-B-255ENST00000498007 TTBK1Q5TCY1 1321 aaPredicted RBP32.51■■■□□ 2.8
HLA-B-255ENST00000498007 TNIKQ9UKE5 1360 aa32.5■■■□□ 2.79
HLA-B-255ENST00000498007 UBTFP17480 764 aaKnown RBP32.49■■■□□ 2.79
HLA-B-255ENST00000498007 PTPRGP23470 1445 aa32.46■■■□□ 2.79
HLA-B-255ENST00000498007 RANGAP1P46060 587 aaPredicted RBP32.44■■■□□ 2.78
HLA-B-255ENST00000498007 SAMD9Q5K651 1589 aa32.43■■■□□ 2.78
HLA-B-255ENST00000498007 ADCY10Q96PN6 1610 aa32.39■■■□□ 2.78
HLA-B-255ENST00000498007 P3H3Q8IVL6 736 aa32.34■■■□□ 2.77
HLA-B-255ENST00000498007 EFCAB5A4FU69 1503 aa32.31■■■□□ 2.76
HLA-B-255ENST00000498007 UACAQ9BZF9 1416 aa32.26■■■□□ 2.76
HLA-B-255ENST00000498007 FHOD3Q2V2M9 1422 aa32.25■■■□□ 2.75
HLA-B-255ENST00000498007 ABCC2Q92887 1545 aa32.24■■■□□ 2.75
HLA-B-255ENST00000498007 PLB1Q6P1J6 1458 aa32.22■■■□□ 2.75
HLA-B-255ENST00000498007 UHRF1BP1LA0JNW5 1464 aa32.21■■■□□ 2.75
HLA-B-255ENST00000498007 NPM1P06748 294 aaKnown RBP eCLIP32.18■■■□□ 2.74
HLA-B-255ENST00000498007 ABCA8O94911 1581 aa32.18■■■□□ 2.74
HLA-B-255ENST00000498007 ARHGAP35Q9NRY4 1499 aa32.16■■■□□ 2.74
HLA-B-255ENST00000498007 MAPKBP1O60336 1514 aa32.1■■■□□ 2.73
HLA-B-255ENST00000498007 ZCCHC11Q5TAX3 1644 aaKnown RBP32.09■■■□□ 2.73
HLA-B-255ENST00000498007 RAPGEF6Q8TEU7 1601 aa32.09■■■□□ 2.73
HLA-B-255ENST00000498007 TRHP20396 242 aaPredicted RBP32.09■■■□□ 2.73
HLA-B-255ENST00000498007 KDM5BQ9UGL1 1544 aa32.06■■■□□ 2.72
HLA-B-255ENST00000498007 LOC105371045A0A1W2PR82 267 aa32.05■■■□□ 2.72
HLA-B-255ENST00000498007 CLIP1P30622 1438 aa32.03■■■□□ 2.72
HLA-B-255ENST00000498007 FMN1Q68DA7 1419 aa31.97■■■□□ 2.71
HLA-B-255ENST00000498007 ARID3CA6NKF2 412 aa31.96■■■□□ 2.71
HLA-B-255ENST00000498007 ASXL2Q76L83 1435 aa31.96■■■□□ 2.71
HLA-B-255ENST00000498007 CEP162Q5TB80 1403 aa31.95■■■□□ 2.71
HLA-B-255ENST00000498007 KIF13AQ9H1H9 1805 aa31.95■■■□□ 2.7
HLA-B-255ENST00000498007 NUP153P49790 1475 aaKnown RBP31.93■■■□□ 2.7
HLA-B-255ENST00000498007 DIP2BQ9P265 1576 aa31.93■■■□□ 2.7
HLA-B-255ENST00000498007 ABCC10Q5T3U5 1492 aa31.9■■■□□ 2.7
HLA-B-255ENST00000498007 ATP10BO94823 1461 aa31.88■■■□□ 2.69
HLA-B-255ENST00000498007 HECW1Q76N89 1606 aa31.87■■■□□ 2.69
HLA-B-255ENST00000498007 PCF11O94913 1555 aaKnown RBP31.84■■■□□ 2.69
HLA-B-255ENST00000498007 WDR7Q9Y4E6 1490 aa31.84■■■□□ 2.69
HLA-B-255ENST00000498007 FAM69CQ0P6D2 419 aa31.82■■■□□ 2.68
HLA-B-255ENST00000498007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.81■■■□□ 2.68
HLA-B-255ENST00000498007 HNRNPUL2Q1KMD3 747 aaKnown RBP31.81■■■□□ 2.68
HLA-B-255ENST00000498007 ATP1B4Q9UN42 357 aaPredicted RBP31.81■■■□□ 2.68
HLA-B-255ENST00000498007 CDK13Q14004 1512 aaKnown RBP31.78■■■□□ 2.68
HLA-B-255ENST00000498007 EPRSP07814 1512 aaKnown RBP31.77■■■□□ 2.68
HLA-B-255ENST00000498007 LRRIQ1Q96JM4 1722 aa31.75■■■□□ 2.67
HLA-B-255ENST00000498007 CASKIN1Q8WXD9 1431 aa31.74■■■□□ 2.67
HLA-B-255ENST00000498007 GLI2P10070 1586 aa31.73■■■□□ 2.67
HLA-B-255ENST00000498007 FYCO1Q9BQS8 1478 aa31.72■■■□□ 2.67
HLA-B-255ENST00000498007 TSPOAP1O95153 1857 aa31.69■■■□□ 2.66
HLA-B-255ENST00000498007 KCNH8Q96L42 1107 aa31.67■■■□□ 2.66
HLA-B-255ENST00000498007 MAP3K4Q9Y6R4 1608 aa31.64■■■□□ 2.66
HLA-B-255ENST00000498007 CCDC18Q5T9S5 1454 aa31.63■■■□□ 2.65
HLA-B-255ENST00000498007 PLEKHD1A6NEE1 506 aa31.59■■■□□ 2.65
HLA-B-255ENST00000498007 CFAP43Q8NDM7 1665 aa31.59■■■□□ 2.65
HLA-B-255ENST00000498007 PPRC1Q5VV67 1664 aaKnown RBP31.57■■■□□ 2.65
HLA-B-255ENST00000498007 ABCA9Q8IUA7 1624 aa31.54■■■□□ 2.64
HLA-B-255ENST00000498007 VPS8Q8N3P4 1428 aa31.54■■■□□ 2.64
HLA-B-255ENST00000498007 CDK11AQ9UQ88 783 aaPredicted RBP31.51■■■□□ 2.63
HLA-B-255ENST00000498007 CD109Q6YHK3 1445 aa31.49■■■□□ 2.63
HLA-B-255ENST00000498007 KIF14Q15058 1648 aa31.46■■■□□ 2.63
HLA-B-255ENST00000498007 TROQ12816 1431 aaPredicted RBP31.46■■■□□ 2.63
HLA-B-255ENST00000498007 TTC37Q6PGP7 1564 aa31.46■■■□□ 2.63
HLA-B-255ENST00000498007 MAGI3Q5TCQ9 1506 aa31.45■■■□□ 2.63
HLA-B-255ENST00000498007 TEX14Q8IWB6 1497 aa31.45■■■□□ 2.62
HLA-B-255ENST00000498007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.44■■■□□ 2.62
HLA-B-255ENST00000498007 KDM6BO15054 1643 aa31.38■■■□□ 2.61
HLA-B-255ENST00000498007 TIAM1Q13009 1591 aa31.34■■■□□ 2.61
HLA-B-255ENST00000498007 MYO5CQ9NQX4 1742 aa31.32■■■□□ 2.61
HLA-B-255ENST00000498007 MTUS2Q5JR59 1369 aa31.3■■■□□ 2.6
HLA-B-255ENST00000498007 EHBP1L1Q8N3D4 1523 aa31.3■■■□□ 2.6
HLA-B-255ENST00000498007 CFAP74Q9C0B2 1584 aa31.25■■■□□ 2.59
HLA-B-255ENST00000498007 FANCAO15360 1455 aa31.22■■■□□ 2.59
HLA-B-255ENST00000498007 NEO1Q92859 1461 aa31.21■■■□□ 2.59
HLA-B-255ENST00000498007 PLCH2O75038 1416 aa31.21■■■□□ 2.59
HLA-B-255ENST00000498007 COL17A1Q9UMD9 1497 aaPredicted RBP31.2■■■□□ 2.58
HLA-B-255ENST00000498007 PREX2Q70Z35 1606 aa31.2■■■□□ 2.58
HLA-B-255ENST00000498007 MAP3K1Q13233 1512 aa31.19■■■□□ 2.58
HLA-B-255ENST00000498007 CDC42BPAQ5VT25 1732 aa31.18■■■□□ 2.58
HLA-B-255ENST00000498007 ARHGAP5Q13017 1502 aa31.18■■■□□ 2.58
HLA-B-255ENST00000498007 ARAP3Q8WWN8 1544 aa31.17■■■□□ 2.58
HLA-B-255ENST00000498007 LRRC9Q6ZRR7 1453 aa31.16■■■□□ 2.58
HLA-B-255ENST00000498007 SUPT6HQ7KZ85 1726 aaKnown RBP31.16■■■□□ 2.58
HLA-B-255ENST00000498007 CDC42BPBQ9Y5S2 1711 aa31.16■■■□□ 2.58
HLA-B-255ENST00000498007 APLP2Q06481 763 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms