RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 NUP160Q12769 1436 aa33.29■■■□□ 2.92
CTSD-206ENST00000497544 KDM6BO15054 1643 aa33.29■■■□□ 2.92
CTSD-206ENST00000497544 IGF1RP08069 1367 aa33.29■■■□□ 2.92
CTSD-206ENST00000497544 ABCC10Q5T3U5 1492 aa33.29■■■□□ 2.92
CTSD-206ENST00000497544 FAM69CQ0P6D2 419 aa33.26■■■□□ 2.91
CTSD-206ENST00000497544 DIP2BQ9P265 1576 aa33.23■■■□□ 2.91
CTSD-206ENST00000497544 FAM9AQ8IZU1 332 aaPredicted RBP33.22■■■□□ 2.91
CTSD-206ENST00000497544 EEA1Q15075 1411 aa33.2■■■□□ 2.91
CTSD-206ENST00000497544 ADAMTS12P58397 1594 aa33.2■■■□□ 2.91
CTSD-206ENST00000497544 CSRNP3Q8WYN3 585 aa33.17■■■□□ 2.9
CTSD-206ENST00000497544 FHAD1B1AJZ9 1412 aa33.17■■■□□ 2.9
CTSD-206ENST00000497544 MAPKBP1O60336 1514 aa33.14■■■□□ 2.9
CTSD-206ENST00000497544 CARMIL1Q5VZK9 1371 aa33.12■■■□□ 2.89
CTSD-206ENST00000497544 TSPOAP1O95153 1857 aa33.12■■■□□ 2.89
CTSD-206ENST00000497544 CUL7Q14999 1698 aa33.11■■■□□ 2.89
CTSD-206ENST00000497544 PRG4Q92954 1404 aaPredicted RBP33.05■■■□□ 2.88
CTSD-206ENST00000497544 HECW2Q9P2P5 1572 aa33.02■■■□□ 2.88
CTSD-206ENST00000497544 ADCY10Q96PN6 1610 aa32.98■■■□□ 2.87
CTSD-206ENST00000497544 ADGRL1O94910 1474 aa32.98■■■□□ 2.87
CTSD-206ENST00000497544 RAPGEF2Q9Y4G8 1499 aa32.96■■■□□ 2.87
CTSD-206ENST00000497544 NPM1P06748 294 aaKnown RBP eCLIP32.94■■■□□ 2.86
CTSD-206ENST00000497544 PRXQ9BXM0 1461 aa32.93■■■□□ 2.86
CTSD-206ENST00000497544 JPH4Q96JJ6 628 aa32.86■■■□□ 2.85
CTSD-206ENST00000497544 EHMT2Q96KQ7 1210 aa32.77■■■□□ 2.84
CTSD-206ENST00000497544 KIF21BO75037 1637 aa32.77■■■□□ 2.84
CTSD-206ENST00000497544 PPRC1Q5VV67 1664 aaKnown RBP32.74■■■□□ 2.83
CTSD-206ENST00000497544 FBXO41Q8TF61 875 aa32.69■■■□□ 2.82
CTSD-206ENST00000497544 KIAA0586Q9BVV6 1533 aa32.67■■■□□ 2.82
CTSD-206ENST00000497544 UBTFP17480 764 aaKnown RBP32.67■■■□□ 2.82
CTSD-206ENST00000497544 GOLGA3Q08378 1498 aa32.66■■■□□ 2.82
CTSD-206ENST00000497544 CTTNBP2Q8WZ74 1663 aa32.57■■■□□ 2.8
CTSD-206ENST00000497544 COL17A1Q9UMD9 1497 aaPredicted RBP32.54■■■□□ 2.8
CTSD-206ENST00000497544 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
CTSD-206ENST00000497544 GLI2P10070 1586 aa32.53■■■□□ 2.8
CTSD-206ENST00000497544 LOC105371045A0A1W2PR82 267 aa32.48■■■□□ 2.79
CTSD-206ENST00000497544 RANGAP1P46060 587 aaPredicted RBP32.42■■■□□ 2.78
CTSD-206ENST00000497544 ASXL2Q76L83 1435 aa32.42■■■□□ 2.78
CTSD-206ENST00000497544 ABCC2Q92887 1545 aa32.38■■■□□ 2.77
CTSD-206ENST00000497544 PLB1Q6P1J6 1458 aa32.38■■■□□ 2.77
CTSD-206ENST00000497544 UGGT2Q9NYU1 1516 aa32.37■■■□□ 2.77
CTSD-206ENST00000497544 TNIKQ9UKE5 1360 aa32.37■■■□□ 2.77
CTSD-206ENST00000497544 CARMIL2Q6F5E8 1435 aa32.36■■■□□ 2.77
CTSD-206ENST00000497544 MAP3K4Q9Y6R4 1608 aa32.35■■■□□ 2.77
CTSD-206ENST00000497544 PTPRGP23470 1445 aa32.31■■■□□ 2.76
CTSD-206ENST00000497544 LMTK3Q96Q04 1460 aa32.29■■■□□ 2.76
CTSD-206ENST00000497544 DISP1Q96F81 1524 aa32.26■■■□□ 2.75
CTSD-206ENST00000497544 TEX14Q8IWB6 1497 aa32.25■■■□□ 2.75
CTSD-206ENST00000497544 P3H3Q8IVL6 736 aa32.25■■■□□ 2.75
CTSD-206ENST00000497544 EPRSP07814 1512 aaKnown RBP32.23■■■□□ 2.75
CTSD-206ENST00000497544 TTBK1Q5TCY1 1321 aaPredicted RBP32.23■■■□□ 2.75
CTSD-206ENST00000497544 KIAA0556O60303 1618 aa32.2■■■□□ 2.75
CTSD-206ENST00000497544 UHRF1BP1LA0JNW5 1464 aa32.16■■■□□ 2.74
CTSD-206ENST00000497544 SAMD9Q5K651 1589 aa32.15■■■□□ 2.74
CTSD-206ENST00000497544 EFCAB5A4FU69 1503 aa32.14■■■□□ 2.74
CTSD-206ENST00000497544 CLIP1P30622 1438 aa32.1■■■□□ 2.73
CTSD-206ENST00000497544 ARHGAP35Q9NRY4 1499 aa32.08■■■□□ 2.73
CTSD-206ENST00000497544 CEP162Q5TB80 1403 aa32.07■■■□□ 2.72
CTSD-206ENST00000497544 FHOD3Q2V2M9 1422 aa32.05■■■□□ 2.72
CTSD-206ENST00000497544 UACAQ9BZF9 1416 aa32.04■■■□□ 2.72
CTSD-206ENST00000497544 KDM5BQ9UGL1 1544 aa32.04■■■□□ 2.72
CTSD-206ENST00000497544 ZCCHC11Q5TAX3 1644 aaKnown RBP32.04■■■□□ 2.72
CTSD-206ENST00000497544 ILDR2Q71H61 639 aa31.98■■■□□ 2.71
CTSD-206ENST00000497544 SOCS7O14512 581 aa31.97■■■□□ 2.71
CTSD-206ENST00000497544 PTPRMP28827 1452 aa31.92■■■□□ 2.7
CTSD-206ENST00000497544 ADAMTSL3P82987 1691 aa31.91■■■□□ 2.7
CTSD-206ENST00000497544 FMN1Q68DA7 1419 aa31.9■■■□□ 2.7
CTSD-206ENST00000497544 PCF11O94913 1555 aaKnown RBP31.88■■■□□ 2.69
CTSD-206ENST00000497544 MAGI3Q5TCQ9 1506 aa31.86■■■□□ 2.69
CTSD-206ENST00000497544 WDR7Q9Y4E6 1490 aa31.86■■■□□ 2.69
CTSD-206ENST00000497544 CFAP43Q8NDM7 1665 aa31.86■■■□□ 2.69
CTSD-206ENST00000497544 DISP3Q9P2K9 1392 aa31.82■■■□□ 2.69
CTSD-206ENST00000497544 ABCA8O94911 1581 aa31.82■■■□□ 2.68
CTSD-206ENST00000497544 ATP1B4Q9UN42 357 aaPredicted RBP31.82■■■□□ 2.68
CTSD-206ENST00000497544 CD109Q6YHK3 1445 aa31.8■■■□□ 2.68
CTSD-206ENST00000497544 RAPGEF6Q8TEU7 1601 aa31.78■■■□□ 2.68
CTSD-206ENST00000497544 ARID3CA6NKF2 412 aa31.72■■■□□ 2.67
CTSD-206ENST00000497544 MADDQ8WXG6 1647 aa31.7■■■□□ 2.66
CTSD-206ENST00000497544 BCORL1Q5H9F3 1711 aa31.69■■■□□ 2.66
CTSD-206ENST00000497544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
CTSD-206ENST00000497544 HNRNPUL2Q1KMD3 747 aaKnown RBP31.68■■■□□ 2.66
CTSD-206ENST00000497544 CASKIN1Q8WXD9 1431 aa31.67■■■□□ 2.66
CTSD-206ENST00000497544 CERKQ8TCT0 537 aa31.67■■■□□ 2.66
CTSD-206ENST00000497544 ARAP3Q8WWN8 1544 aa31.66■■■□□ 2.66
CTSD-206ENST00000497544 NUP153P49790 1475 aaKnown RBP31.65■■■□□ 2.66
CTSD-206ENST00000497544 VPS8Q8N3P4 1428 aa31.65■■■□□ 2.66
CTSD-206ENST00000497544 HECW1Q76N89 1606 aa31.64■■■□□ 2.65
CTSD-206ENST00000497544 ATP10BO94823 1461 aa31.62■■■□□ 2.65
CTSD-206ENST00000497544 FYCO1Q9BQS8 1478 aa31.6■■■□□ 2.65
CTSD-206ENST00000497544 KCNH8Q96L42 1107 aa31.59■■■□□ 2.65
CTSD-206ENST00000497544 SPATA31D1Q6ZQQ2 1576 aa31.56■■■□□ 2.64
CTSD-206ENST00000497544 HSPA2P54652 639 aa31.56■■■□□ 2.64
CTSD-206ENST00000497544 RIMS1Q86UR5 1692 aaKnown RBP31.55■■■□□ 2.64
CTSD-206ENST00000497544 PLEKHD1A6NEE1 506 aa31.52■■■□□ 2.64
CTSD-206ENST00000497544 CDK13Q14004 1512 aaKnown RBP31.5■■■□□ 2.63
CTSD-206ENST00000497544 CDK11AQ9UQ88 783 aaPredicted RBP31.5■■■□□ 2.63
CTSD-206ENST00000497544 CCDC18Q5T9S5 1454 aa31.49■■■□□ 2.63
CTSD-206ENST00000497544 LRRIQ1Q96JM4 1722 aa31.46■■■□□ 2.63
CTSD-206ENST00000497544 APLP2Q06481 763 aa31.46■■■□□ 2.63
CTSD-206ENST00000497544 FRMPD1Q5SYB0 1578 aa31.41■■■□□ 2.62
CTSD-206ENST00000497544 ARID4BQ4LE39 1312 aaPredicted RBP31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms