RNA–Protein interactions for RNA: ENST00000497146.5

PTGER3-211, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-211ENST00000497146 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
PTGER3-211ENST00000497146 ZEB1P37275 1124 aaPredicted RBP32.98■■■□□ 2.87
PTGER3-211ENST00000497146 FHAD1B1AJZ9 1412 aa32.98■■■□□ 2.87
PTGER3-211ENST00000497146 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
PTGER3-211ENST00000497146 AQRO60306 1485 aaKnown RBP eCLIP32.96■■■□□ 2.87
PTGER3-211ENST00000497146 MAP3K1Q13233 1512 aa32.89■■■□□ 2.86
PTGER3-211ENST00000497146 ZNF608Q9ULD9 1512 aaPredicted RBP32.86■■■□□ 2.85
PTGER3-211ENST00000497146 EIF4G3O43432 1585 aaKnown RBP32.86■■■□□ 2.85
PTGER3-211ENST00000497146 SAMD9Q5K651 1589 aa32.82■■■□□ 2.85
PTGER3-211ENST00000497146 KANK4Q5T7N3 995 aaPredicted RBP32.81■■■□□ 2.84
PTGER3-211ENST00000497146 TIAM1Q13009 1591 aa32.8■■■□□ 2.84
PTGER3-211ENST00000497146 FHOD3Q2V2M9 1422 aa32.79■■■□□ 2.84
PTGER3-211ENST00000497146 PCF11O94913 1555 aaKnown RBP32.78■■■□□ 2.84
PTGER3-211ENST00000497146 FMN1Q68DA7 1419 aa32.77■■■□□ 2.84
PTGER3-211ENST00000497146 FYCO1Q9BQS8 1478 aa32.77■■■□□ 2.84
PTGER3-211ENST00000497146 CFAP43Q8NDM7 1665 aa32.74■■■□□ 2.83
PTGER3-211ENST00000497146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.73■■■□□ 2.83
PTGER3-211ENST00000497146 P3H3Q8IVL6 736 aa32.72■■■□□ 2.83
PTGER3-211ENST00000497146 IQGAP2Q13576 1575 aa32.72■■■□□ 2.83
PTGER3-211ENST00000497146 CASKIN1Q8WXD9 1431 aa32.7■■■□□ 2.83
PTGER3-211ENST00000497146 SNAPC4Q5SXM2 1469 aa32.7■■■□□ 2.83
PTGER3-211ENST00000497146 MAGI1Q96QZ7 1491 aaPredicted RBP32.68■■■□□ 2.82
PTGER3-211ENST00000497146 CCER1Q8TC90 406 aaPredicted RBP32.65■■■□□ 2.82
PTGER3-211ENST00000497146 LRRC9Q6ZRR7 1453 aa32.62■■■□□ 2.81
PTGER3-211ENST00000497146 RRBP1Q9P2E9 1410 aaKnown RBP32.61■■■□□ 2.81
PTGER3-211ENST00000497146 GRIN2AQ12879 1464 aa32.6■■■□□ 2.81
PTGER3-211ENST00000497146 HNRNPUL2Q1KMD3 747 aaKnown RBP32.58■■■□□ 2.81
PTGER3-211ENST00000497146 SYNJ2O15056 1496 aa32.54■■■□□ 2.8
PTGER3-211ENST00000497146 KIAA0586Q9BVV6 1533 aa32.54■■■□□ 2.8
PTGER3-211ENST00000497146 UGGT2Q9NYU1 1516 aa32.53■■■□□ 2.8
PTGER3-211ENST00000497146 ATP1B4Q9UN42 357 aaPredicted RBP32.49■■■□□ 2.79
PTGER3-211ENST00000497146 CCNB3Q8WWL7 1395 aa32.47■■■□□ 2.79
PTGER3-211ENST00000497146 CHMP7Q8WUX9 453 aaPredicted RBP32.41■■■□□ 2.78
PTGER3-211ENST00000497146 HECW1Q76N89 1606 aa32.38■■■□□ 2.77
PTGER3-211ENST00000497146 CCDC18Q5T9S5 1454 aa32.38■■■□□ 2.77
PTGER3-211ENST00000497146 LRRIQ1Q96JM4 1722 aa32.37■■■□□ 2.77
PTGER3-211ENST00000497146 KIAA0556O60303 1618 aa32.37■■■□□ 2.77
PTGER3-211ENST00000497146 CEP170Q5SW79 1584 aa32.35■■■□□ 2.77
PTGER3-211ENST00000497146 NUP160Q12769 1436 aa32.31■■■□□ 2.76
PTGER3-211ENST00000497146 PHLDB1Q86UU1 1377 aa32.3■■■□□ 2.76
PTGER3-211ENST00000497146 MTUS2Q5JR59 1369 aa32.3■■■□□ 2.76
PTGER3-211ENST00000497146 DISP1Q96F81 1524 aa32.29■■■□□ 2.76
PTGER3-211ENST00000497146 EHBP1L1Q8N3D4 1523 aa32.28■■■□□ 2.76
PTGER3-211ENST00000497146 FBLN2P98095 1184 aa32.25■■■□□ 2.75
PTGER3-211ENST00000497146 SUPT6HQ7KZ85 1726 aaKnown RBP32.22■■■□□ 2.75
PTGER3-211ENST00000497146 EPRSP07814 1512 aaKnown RBP32.18■■■□□ 2.74
PTGER3-211ENST00000497146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.18■■■□□ 2.74
PTGER3-211ENST00000497146 CARMIL2Q6F5E8 1435 aa32.15■■■□□ 2.74
PTGER3-211ENST00000497146 NCOA2Q15596 1464 aa32.12■■■□□ 2.73
PTGER3-211ENST00000497146 RAPGEF6Q8TEU7 1601 aa32.12■■■□□ 2.73
PTGER3-211ENST00000497146 FGD6Q6ZV73 1430 aa32.1■■■□□ 2.73
PTGER3-211ENST00000497146 ITGAEP38570 1179 aa32.07■■■□□ 2.72
PTGER3-211ENST00000497146 FAM50AQ14320 339 aaKnown RBP32.07■■■□□ 2.72
PTGER3-211ENST00000497146 ARHGEF11O15085 1522 aa32.06■■■□□ 2.72
PTGER3-211ENST00000497146 MAGI3Q5TCQ9 1506 aa32.06■■■□□ 2.72
PTGER3-211ENST00000497146 JPH4Q96JJ6 628 aa32.05■■■□□ 2.72
PTGER3-211ENST00000497146 MYOM3Q5VTT5 1437 aa32.05■■■□□ 2.72
PTGER3-211ENST00000497146 CLSPNQ9HAW4 1339 aa32.04■■■□□ 2.72
PTGER3-211ENST00000497146 CHD1O14646 1710 aa32.04■■■□□ 2.72
PTGER3-211ENST00000497146 CDK13Q14004 1512 aaKnown RBP32.04■■■□□ 2.72
PTGER3-211ENST00000497146 NUP153P49790 1475 aaKnown RBP32.01■■■□□ 2.71
PTGER3-211ENST00000497146 DHX57Q6P158 1386 aaKnown RBP31.99■■■□□ 2.71
PTGER3-211ENST00000497146 SETD5Q9C0A6 1442 aa31.92■■■□□ 2.7
PTGER3-211ENST00000497146 CDK11AQ9UQ88 783 aaPredicted RBP31.91■■■□□ 2.7
PTGER3-211ENST00000497146 PTPN23Q9H3S7 1636 aa31.91■■■□□ 2.7
PTGER3-211ENST00000497146 RAB3GAP2Q9H2M9 1393 aa31.9■■■□□ 2.7
PTGER3-211ENST00000497146 PLB1Q6P1J6 1458 aa31.88■■■□□ 2.69
PTGER3-211ENST00000497146 MIA2Q96PC5 1412 aa31.85■■■□□ 2.69
PTGER3-211ENST00000497146 TCOF1Q13428 1488 aaKnown RBP31.84■■■□□ 2.69
PTGER3-211ENST00000497146 SHROOM2Q13796 1616 aa31.83■■■□□ 2.69
PTGER3-211ENST00000497146 ABCA8O94911 1581 aa31.83■■■□□ 2.69
PTGER3-211ENST00000497146 PRG4Q92954 1404 aaPredicted RBP31.82■■■□□ 2.68
PTGER3-211ENST00000497146 ARID3CA6NKF2 412 aa31.81■■■□□ 2.68
PTGER3-211ENST00000497146 TROQ12816 1431 aaPredicted RBP31.76■■■□□ 2.68
PTGER3-211ENST00000497146 ADCY10Q96PN6 1610 aa31.74■■■□□ 2.67
PTGER3-211ENST00000497146 HFM1A2PYH4 1435 aa31.72■■■□□ 2.67
PTGER3-211ENST00000497146 PTPRGP23470 1445 aa31.7■■■□□ 2.67
PTGER3-211ENST00000497146 ITSN2Q9NZM3 1697 aa31.69■■■□□ 2.66
PTGER3-211ENST00000497146 PTPRKQ15262 1439 aa31.69■■■□□ 2.66
PTGER3-211ENST00000497146 CLASP1Q7Z460 1538 aa31.64■■■□□ 2.66
PTGER3-211ENST00000497146 AKNAQ7Z591 1439 aa31.62■■■□□ 2.65
PTGER3-211ENST00000497146 MAPKBP1O60336 1514 aa31.61■■■□□ 2.65
PTGER3-211ENST00000497146 KIF14Q15058 1648 aa31.6■■■□□ 2.65
PTGER3-211ENST00000497146 ATP10BO94823 1461 aa31.6■■■□□ 2.65
PTGER3-211ENST00000497146 GCC2Q8IWJ2 1684 aa31.58■■■□□ 2.65
PTGER3-211ENST00000497146 NAIPQ13075 1403 aa31.57■■■□□ 2.64
PTGER3-211ENST00000497146 ZNF316A6NFI3 1004 aaPredicted RBP31.57■■■□□ 2.64
PTGER3-211ENST00000497146 PLEKHD1A6NEE1 506 aa31.56■■■□□ 2.64
PTGER3-211ENST00000497146 DNMT1P26358 1616 aaKnown RBP31.55■■■□□ 2.64
PTGER3-211ENST00000497146 UACAQ9BZF9 1416 aa31.54■■■□□ 2.64
PTGER3-211ENST00000497146 GPATCH8Q9UKJ3 1502 aaKnown RBP31.49■■■□□ 2.63
PTGER3-211ENST00000497146 DAPK1P53355 1430 aa31.48■■■□□ 2.63
PTGER3-211ENST00000497146 ABCC2Q92887 1545 aa31.47■■■□□ 2.63
PTGER3-211ENST00000497146 ERCC6L2Q5T890 1561 aa31.47■■■□□ 2.63
PTGER3-211ENST00000497146 CAMSAP2Q08AD1 1489 aa31.45■■■□□ 2.63
PTGER3-211ENST00000497146 CFDP1Q9UEE9 299 aaPredicted RBP31.45■■■□□ 2.62
PTGER3-211ENST00000497146 ROCK1Q13464 1354 aa31.45■■■□□ 2.62
PTGER3-211ENST00000497146 DIEXFQ68CQ4 756 aaKnown RBP31.44■■■□□ 2.62
PTGER3-211ENST00000497146 CDC42BPAQ5VT25 1732 aa31.43■■■□□ 2.62
PTGER3-211ENST00000497146 ABCC10Q5T3U5 1492 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms