RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 PRG4Q92954 1404 aaPredicted RBP26.17■■□□□ 1.78
NEK4-206ENST00000496822 JPH4Q96JJ6 628 aa26.14■■□□□ 1.78
NEK4-206ENST00000496822 KIAA0586Q9BVV6 1533 aa26.07■■□□□ 1.76
NEK4-206ENST00000496822 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
NEK4-206ENST00000496822 IQGAP2Q13576 1575 aa25.87■■□□□ 1.73
NEK4-206ENST00000496822 ADCY10Q96PN6 1610 aa25.87■■□□□ 1.73
NEK4-206ENST00000496822 RAPGEF2Q9Y4G8 1499 aa25.86■■□□□ 1.73
NEK4-206ENST00000496822 KIF13AQ9H1H9 1805 aa25.77■■□□□ 1.72
NEK4-206ENST00000496822 PTPRGP23470 1445 aa25.77■■□□□ 1.72
NEK4-206ENST00000496822 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
NEK4-206ENST00000496822 MAPKBP1O60336 1514 aa25.76■■□□□ 1.71
NEK4-206ENST00000496822 DISP1Q96F81 1524 aa25.76■■□□□ 1.71
NEK4-206ENST00000496822 TNIKQ9UKE5 1360 aa25.75■■□□□ 1.71
NEK4-206ENST00000496822 TTBK1Q5TCY1 1321 aaPredicted RBP25.74■■□□□ 1.71
NEK4-206ENST00000496822 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
NEK4-206ENST00000496822 UGGT2Q9NYU1 1516 aa25.72■■□□□ 1.71
NEK4-206ENST00000496822 ABCC10Q5T3U5 1492 aa25.71■■□□□ 1.71
NEK4-206ENST00000496822 PRXQ9BXM0 1461 aa25.69■■□□□ 1.7
NEK4-206ENST00000496822 DIP2BQ9P265 1576 aa25.68■■□□□ 1.7
NEK4-206ENST00000496822 KIAA0556O60303 1618 aa25.66■■□□□ 1.7
NEK4-206ENST00000496822 CTTNBP2Q8WZ74 1663 aa25.65■■□□□ 1.7
NEK4-206ENST00000496822 FAM69CQ0P6D2 419 aa25.64■■□□□ 1.7
NEK4-206ENST00000496822 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
NEK4-206ENST00000496822 UACAQ9BZF9 1416 aa25.6■■□□□ 1.69
NEK4-206ENST00000496822 UHRF1BP1LA0JNW5 1464 aa25.6■■□□□ 1.69
NEK4-206ENST00000496822 ASXL2Q76L83 1435 aa25.52■■□□□ 1.68
NEK4-206ENST00000496822 KDM5BQ9UGL1 1544 aa25.49■■□□□ 1.67
NEK4-206ENST00000496822 CSRNP3Q8WYN3 585 aa25.49■■□□□ 1.67
NEK4-206ENST00000496822 GOLGA3Q08378 1498 aa25.48■■□□□ 1.67
NEK4-206ENST00000496822 PLB1Q6P1J6 1458 aa25.47■■□□□ 1.67
NEK4-206ENST00000496822 ZCCHC11Q5TAX3 1644 aaKnown RBP25.45■■□□□ 1.67
NEK4-206ENST00000496822 TSPOAP1O95153 1857 aa25.43■■□□□ 1.66
NEK4-206ENST00000496822 EEA1Q15075 1411 aa25.43■■□□□ 1.66
NEK4-206ENST00000496822 ABCA8O94911 1581 aa25.4■■□□□ 1.66
NEK4-206ENST00000496822 GLI2P10070 1586 aa25.4■■□□□ 1.66
NEK4-206ENST00000496822 KDM6BO15054 1643 aa25.37■■□□□ 1.65
NEK4-206ENST00000496822 EPRSP07814 1512 aaKnown RBP25.37■■□□□ 1.65
NEK4-206ENST00000496822 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
NEK4-206ENST00000496822 PPRC1Q5VV67 1664 aaKnown RBP25.36■■□□□ 1.65
NEK4-206ENST00000496822 SAMD9Q5K651 1589 aa25.32■■□□□ 1.64
NEK4-206ENST00000496822 P3H3Q8IVL6 736 aa25.32■■□□□ 1.64
NEK4-206ENST00000496822 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
NEK4-206ENST00000496822 MAP3K4Q9Y6R4 1608 aa25.29■■□□□ 1.64
NEK4-206ENST00000496822 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
NEK4-206ENST00000496822 KIF21BO75037 1637 aa25.26■■□□□ 1.63
NEK4-206ENST00000496822 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
NEK4-206ENST00000496822 ARID3CA6NKF2 412 aa25.2■■□□□ 1.62
NEK4-206ENST00000496822 RANGAP1P46060 587 aaPredicted RBP25.2■■□□□ 1.62
NEK4-206ENST00000496822 FHOD3Q2V2M9 1422 aa25.18■■□□□ 1.62
NEK4-206ENST00000496822 ATP10BO94823 1461 aa25.17■■□□□ 1.62
NEK4-206ENST00000496822 COL17A1Q9UMD9 1497 aaPredicted RBP25.17■■□□□ 1.62
NEK4-206ENST00000496822 TEX14Q8IWB6 1497 aa25.16■■□□□ 1.62
NEK4-206ENST00000496822 RAPGEF6Q8TEU7 1601 aa25.16■■□□□ 1.62
NEK4-206ENST00000496822 KCNH8Q96L42 1107 aa25.14■■□□□ 1.62
NEK4-206ENST00000496822 CFAP43Q8NDM7 1665 aa25.12■■□□□ 1.61
NEK4-206ENST00000496822 EHMT2Q96KQ7 1210 aa25.11■■□□□ 1.61
NEK4-206ENST00000496822 CD109Q6YHK3 1445 aa25.11■■□□□ 1.61
NEK4-206ENST00000496822 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
NEK4-206ENST00000496822 EFCAB5A4FU69 1503 aa25.09■■□□□ 1.61
NEK4-206ENST00000496822 MAGI3Q5TCQ9 1506 aa25.08■■□□□ 1.61
NEK4-206ENST00000496822 KDM4FA0A1W2PPD8 638 aa25■■□□□ 1.59
NEK4-206ENST00000496822 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
NEK4-206ENST00000496822 ABCA9Q8IUA7 1624 aa24.99■■□□□ 1.59
NEK4-206ENST00000496822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
NEK4-206ENST00000496822 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
NEK4-206ENST00000496822 ARHGAP35Q9NRY4 1499 aa24.94■■□□□ 1.58
NEK4-206ENST00000496822 CDK13Q14004 1512 aaKnown RBP24.9■■□□□ 1.58
NEK4-206ENST00000496822 ADGRL1O94910 1474 aa24.89■■□□□ 1.57
NEK4-206ENST00000496822 ARAP3Q8WWN8 1544 aa24.87■■□□□ 1.57
NEK4-206ENST00000496822 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
NEK4-206ENST00000496822 FMN1Q68DA7 1419 aa24.84■■□□□ 1.57
NEK4-206ENST00000496822 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
NEK4-206ENST00000496822 NEO1Q92859 1461 aa24.82■■□□□ 1.56
NEK4-206ENST00000496822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.56
NEK4-206ENST00000496822 TTC37Q6PGP7 1564 aa24.8■■□□□ 1.56
NEK4-206ENST00000496822 PHLDB1Q86UU1 1377 aa24.79■■□□□ 1.56
NEK4-206ENST00000496822 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
NEK4-206ENST00000496822 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
NEK4-206ENST00000496822 RAPGEF3O95398 923 aa24.74■■□□□ 1.55
NEK4-206ENST00000496822 FANCAO15360 1455 aa24.7■■□□□ 1.55
NEK4-206ENST00000496822 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
NEK4-206ENST00000496822 PCF11O94913 1555 aaKnown RBP24.68■■□□□ 1.54
NEK4-206ENST00000496822 AKNAQ7Z591 1439 aa24.68■■□□□ 1.54
NEK4-206ENST00000496822 CFAP74Q9C0B2 1584 aa24.67■■□□□ 1.54
NEK4-206ENST00000496822 DENND4BO75064 1496 aaPredicted RBP24.65■■□□□ 1.54
NEK4-206ENST00000496822 KIF14Q15058 1648 aa24.65■■□□□ 1.54
NEK4-206ENST00000496822 RICTORQ6R327 1708 aa24.64■■□□□ 1.53
NEK4-206ENST00000496822 PLCH2O75038 1416 aa24.62■■□□□ 1.53
NEK4-206ENST00000496822 TROQ12816 1431 aaPredicted RBP24.62■■□□□ 1.53
NEK4-206ENST00000496822 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
NEK4-206ENST00000496822 CLIP1P30622 1438 aa24.61■■□□□ 1.53
NEK4-206ENST00000496822 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
NEK4-206ENST00000496822 ARHGEF40Q8TER5 1519 aa24.6■■□□□ 1.53
NEK4-206ENST00000496822 MYO5CQ9NQX4 1742 aa24.57■■□□□ 1.52
NEK4-206ENST00000496822 CCDC18Q5T9S5 1454 aa24.56■■□□□ 1.52
NEK4-206ENST00000496822 ZMYM4Q5VZL5 1548 aa24.56■■□□□ 1.52
NEK4-206ENST00000496822 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
NEK4-206ENST00000496822 SCAPERQ9BY12 1400 aa24.53■■□□□ 1.52
NEK4-206ENST00000496822 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
NEK4-206ENST00000496822 ADAMTSL3P82987 1691 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms