RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CHMP7Q8WUX9 453 aaPredicted RBP26.74■■□□□ 1.87
LMNA-216ENST00000496738 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
LMNA-216ENST00000496738 ARHGAP35Q9NRY4 1499 aa26.68■■□□□ 1.86
LMNA-216ENST00000496738 ARAP1Q96P48 1450 aa26.66■■□□□ 1.86
LMNA-216ENST00000496738 P3H3Q8IVL6 736 aa26.62■■□□□ 1.85
LMNA-216ENST00000496738 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
LMNA-216ENST00000496738 IQGAP2Q13576 1575 aa26.59■■□□□ 1.85
LMNA-216ENST00000496738 VPS8Q8N3P4 1428 aa26.58■■□□□ 1.85
LMNA-216ENST00000496738 CHD1O14646 1710 aa26.58■■□□□ 1.85
LMNA-216ENST00000496738 PPARGC1BQ86YN6 1023 aaKnown RBP26.56■■□□□ 1.84
LMNA-216ENST00000496738 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
LMNA-216ENST00000496738 FHOD3Q2V2M9 1422 aa26.52■■□□□ 1.84
LMNA-216ENST00000496738 EFCAB5A4FU69 1503 aa26.52■■□□□ 1.84
LMNA-216ENST00000496738 NUP160Q12769 1436 aa26.51■■□□□ 1.83
LMNA-216ENST00000496738 SAMD9Q5K651 1589 aa26.49■■□□□ 1.83
LMNA-216ENST00000496738 TTBK1Q5TCY1 1321 aaPredicted RBP26.42■■□□□ 1.82
LMNA-216ENST00000496738 UGGT2Q9NYU1 1516 aa26.42■■□□□ 1.82
LMNA-216ENST00000496738 DISP1Q96F81 1524 aa26.35■■□□□ 1.81
LMNA-216ENST00000496738 PCF11O94913 1555 aaKnown RBP26.34■■□□□ 1.81
LMNA-216ENST00000496738 APLP2Q06481 763 aa26.34■■□□□ 1.81
LMNA-216ENST00000496738 KIAA0556O60303 1618 aa26.34■■□□□ 1.81
LMNA-216ENST00000496738 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
LMNA-216ENST00000496738 ATP1B4Q9UN42 357 aaPredicted RBP26.31■■□□□ 1.8
LMNA-216ENST00000496738 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
LMNA-216ENST00000496738 CASKIN1Q8WXD9 1431 aa26.22■■□□□ 1.79
LMNA-216ENST00000496738 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
LMNA-216ENST00000496738 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
LMNA-216ENST00000496738 FYCO1Q9BQS8 1478 aa26.21■■□□□ 1.79
LMNA-216ENST00000496738 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
LMNA-216ENST00000496738 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
LMNA-216ENST00000496738 SHROOM2Q13796 1616 aa26.18■■□□□ 1.78
LMNA-216ENST00000496738 KANK4Q5T7N3 995 aaPredicted RBP26.18■■□□□ 1.78
LMNA-216ENST00000496738 TRIM26Q12899 539 aaPredicted RBP26.17■■□□□ 1.78
LMNA-216ENST00000496738 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
LMNA-216ENST00000496738 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
LMNA-216ENST00000496738 LRRIQ1Q96JM4 1722 aa26.12■■□□□ 1.77
LMNA-216ENST00000496738 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
LMNA-216ENST00000496738 ARID3CA6NKF2 412 aa26.1■■□□□ 1.77
LMNA-216ENST00000496738 HECW1Q76N89 1606 aa26.08■■□□□ 1.77
LMNA-216ENST00000496738 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
LMNA-216ENST00000496738 MAP3K1Q13233 1512 aa26.07■■□□□ 1.76
LMNA-216ENST00000496738 PLB1Q6P1J6 1458 aa26.06■■□□□ 1.76
LMNA-216ENST00000496738 RAPGEF6Q8TEU7 1601 aa26.05■■□□□ 1.76
LMNA-216ENST00000496738 LRRC9Q6ZRR7 1453 aa26.02■■□□□ 1.76
LMNA-216ENST00000496738 CDK13Q14004 1512 aaKnown RBP26.01■■□□□ 1.75
LMNA-216ENST00000496738 PTPRGP23470 1445 aa26.01■■□□□ 1.75
LMNA-216ENST00000496738 EPRSP07814 1512 aaKnown RBP25.99■■□□□ 1.75
LMNA-216ENST00000496738 NUP153P49790 1475 aaKnown RBP25.99■■□□□ 1.75
LMNA-216ENST00000496738 CCDC18Q5T9S5 1454 aa25.96■■□□□ 1.75
LMNA-216ENST00000496738 ABCA8O94911 1581 aa25.94■■□□□ 1.74
LMNA-216ENST00000496738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.92■■□□□ 1.74
LMNA-216ENST00000496738 HNRNPUL2Q1KMD3 747 aaKnown RBP25.92■■□□□ 1.74
LMNA-216ENST00000496738 MTUS2Q5JR59 1369 aa25.92■■□□□ 1.74
LMNA-216ENST00000496738 MAGI3Q5TCQ9 1506 aa25.9■■□□□ 1.74
LMNA-216ENST00000496738 UACAQ9BZF9 1416 aa25.85■■□□□ 1.73
LMNA-216ENST00000496738 EHBP1L1Q8N3D4 1523 aa25.84■■□□□ 1.73
LMNA-216ENST00000496738 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
LMNA-216ENST00000496738 ATP10BO94823 1461 aa25.78■■□□□ 1.72
LMNA-216ENST00000496738 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
LMNA-216ENST00000496738 ABCC2Q92887 1545 aa25.77■■□□□ 1.72
LMNA-216ENST00000496738 NCOA2Q15596 1464 aa25.76■■□□□ 1.71
LMNA-216ENST00000496738 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
LMNA-216ENST00000496738 CDK11AQ9UQ88 783 aaPredicted RBP25.74■■□□□ 1.71
LMNA-216ENST00000496738 RRBP1Q9P2E9 1410 aaKnown RBP25.72■■□□□ 1.71
LMNA-216ENST00000496738 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
LMNA-216ENST00000496738 TROQ12816 1431 aaPredicted RBP25.68■■□□□ 1.7
LMNA-216ENST00000496738 ARHGEF11O15085 1522 aa25.67■■□□□ 1.7
LMNA-216ENST00000496738 UHRF1BP1LA0JNW5 1464 aa25.66■■□□□ 1.7
LMNA-216ENST00000496738 ADCY10Q96PN6 1610 aa25.66■■□□□ 1.7
LMNA-216ENST00000496738 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
LMNA-216ENST00000496738 KIF14Q15058 1648 aa25.64■■□□□ 1.7
LMNA-216ENST00000496738 ZCCHC11Q5TAX3 1644 aaKnown RBP25.63■■□□□ 1.69
LMNA-216ENST00000496738 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
LMNA-216ENST00000496738 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
LMNA-216ENST00000496738 FGD6Q6ZV73 1430 aa25.61■■□□□ 1.69
LMNA-216ENST00000496738 ITGAEP38570 1179 aa25.61■■□□□ 1.69
LMNA-216ENST00000496738 KDM5BQ9UGL1 1544 aa25.59■■□□□ 1.69
LMNA-216ENST00000496738 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
LMNA-216ENST00000496738 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
LMNA-216ENST00000496738 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
LMNA-216ENST00000496738 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
LMNA-216ENST00000496738 KCNH8Q96L42 1107 aa25.49■■□□□ 1.67
LMNA-216ENST00000496738 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
LMNA-216ENST00000496738 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
LMNA-216ENST00000496738 GPATCH8Q9UKJ3 1502 aaKnown RBP25.46■■□□□ 1.67
LMNA-216ENST00000496738 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
LMNA-216ENST00000496738 MIA2Q96PC5 1412 aa25.45■■□□□ 1.66
LMNA-216ENST00000496738 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
LMNA-216ENST00000496738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.43■■□□□ 1.66
LMNA-216ENST00000496738 TTC37Q6PGP7 1564 aa25.42■■□□□ 1.66
LMNA-216ENST00000496738 TCOF1Q13428 1488 aaKnown RBP25.42■■□□□ 1.66
LMNA-216ENST00000496738 ZNF644Q9H582 1327 aaPredicted RBP25.42■■□□□ 1.66
LMNA-216ENST00000496738 NPM1P06748 294 aaKnown RBP eCLIP25.42■■□□□ 1.66
LMNA-216ENST00000496738 CFDP1Q9UEE9 299 aaPredicted RBP25.42■■□□□ 1.66
LMNA-216ENST00000496738 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.41■■□□□ 1.669e-7■■□□□ 11.4
LMNA-216ENST00000496738 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
LMNA-216ENST00000496738 WDR7Q9Y4E6 1490 aa25.39■■□□□ 1.66
LMNA-216ENST00000496738 ASXL2Q76L83 1435 aa25.38■■□□□ 1.65
LMNA-216ENST00000496738 PTPRKQ15262 1439 aa25.35■■□□□ 1.65
LMNA-216ENST00000496738 CAMSAP2Q08AD1 1489 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms