RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
HDLBP-246ENST00000496569 JPH4Q96JJ6 628 aa20.94■□□□□ 0.94
HDLBP-246ENST00000496569 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
HDLBP-246ENST00000496569 KIAA0586Q9BVV6 1533 aa20.91■□□□□ 0.94
HDLBP-246ENST00000496569 IQGAP2Q13576 1575 aa20.85■□□□□ 0.93
HDLBP-246ENST00000496569 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.93
HDLBP-246ENST00000496569 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
HDLBP-246ENST00000496569 ADCY10Q96PN6 1610 aa20.78■□□□□ 0.92
HDLBP-246ENST00000496569 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.91
HDLBP-246ENST00000496569 KIF13AQ9H1H9 1805 aa20.74■□□□□ 0.91
HDLBP-246ENST00000496569 DISP1Q96F81 1524 aa20.71■□□□□ 0.91
HDLBP-246ENST00000496569 PRXQ9BXM0 1461 aa20.7■□□□□ 0.9
HDLBP-246ENST00000496569 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
HDLBP-246ENST00000496569 KIAA0556O60303 1618 aa20.67■□□□□ 0.9
HDLBP-246ENST00000496569 CARMIL2Q6F5E8 1435 aa20.67■□□□□ 0.9
HDLBP-246ENST00000496569 PTPRGP23470 1445 aa20.66■□□□□ 0.9
HDLBP-246ENST00000496569 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.89
HDLBP-246ENST00000496569 FAM9AQ8IZU1 332 aaPredicted RBP20.61■□□□□ 0.89
HDLBP-246ENST00000496569 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
HDLBP-246ENST00000496569 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
HDLBP-246ENST00000496569 DIP2BQ9P265 1576 aa20.58■□□□□ 0.88
HDLBP-246ENST00000496569 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
HDLBP-246ENST00000496569 NPM1P06748 294 aaKnown RBP eCLIP20.55■□□□□ 0.88
HDLBP-246ENST00000496569 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
HDLBP-246ENST00000496569 ABCC2Q92887 1545 aa20.53■□□□□ 0.88
HDLBP-246ENST00000496569 EEA1Q15075 1411 aa20.53■□□□□ 0.88
HDLBP-246ENST00000496569 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.88
HDLBP-246ENST00000496569 UACAQ9BZF9 1416 aa20.52■□□□□ 0.87
HDLBP-246ENST00000496569 ZCCHC11Q5TAX3 1644 aaKnown RBP20.5■□□□□ 0.87
HDLBP-246ENST00000496569 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
HDLBP-246ENST00000496569 PLB1Q6P1J6 1458 aa20.49■□□□□ 0.87
HDLBP-246ENST00000496569 FAM69CQ0P6D2 419 aa20.48■□□□□ 0.87
HDLBP-246ENST00000496569 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
HDLBP-246ENST00000496569 KIF21BO75037 1637 aa20.46■□□□□ 0.87
HDLBP-246ENST00000496569 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
HDLBP-246ENST00000496569 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
HDLBP-246ENST00000496569 ASXL2Q76L83 1435 aa20.44■□□□□ 0.86
HDLBP-246ENST00000496569 ABCA8O94911 1581 aa20.44■□□□□ 0.86
HDLBP-246ENST00000496569 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
HDLBP-246ENST00000496569 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
HDLBP-246ENST00000496569 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
HDLBP-246ENST00000496569 PPRC1Q5VV67 1664 aaKnown RBP20.38■□□□□ 0.85
HDLBP-246ENST00000496569 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
HDLBP-246ENST00000496569 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
HDLBP-246ENST00000496569 GLI2P10070 1586 aa20.33■□□□□ 0.84
HDLBP-246ENST00000496569 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
HDLBP-246ENST00000496569 KDM6BO15054 1643 aa20.31■□□□□ 0.84
HDLBP-246ENST00000496569 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
HDLBP-246ENST00000496569 MAP3K4Q9Y6R4 1608 aa20.31■□□□□ 0.84
HDLBP-246ENST00000496569 WDR7Q9Y4E6 1490 aa20.3■□□□□ 0.84
HDLBP-246ENST00000496569 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
HDLBP-246ENST00000496569 ATP10BO94823 1461 aa20.24■□□□□ 0.83
HDLBP-246ENST00000496569 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
HDLBP-246ENST00000496569 NUP153P49790 1475 aaKnown RBP20.2■□□□□ 0.82
HDLBP-246ENST00000496569 KCNH8Q96L42 1107 aa20.2■□□□□ 0.82
HDLBP-246ENST00000496569 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
HDLBP-246ENST00000496569 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
HDLBP-246ENST00000496569 COL17A1Q9UMD9 1497 aaPredicted RBP20.14■□□□□ 0.81
HDLBP-246ENST00000496569 CDK13Q14004 1512 aaKnown RBP20.12■□□□□ 0.81
HDLBP-246ENST00000496569 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
HDLBP-246ENST00000496569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.11■□□□□ 0.81
HDLBP-246ENST00000496569 HNRNPUL2Q1KMD3 747 aaKnown RBP20.11■□□□□ 0.81
HDLBP-246ENST00000496569 TEX14Q8IWB6 1497 aa20.11■□□□□ 0.81
HDLBP-246ENST00000496569 ABCA9Q8IUA7 1624 aa20.09■□□□□ 0.81
HDLBP-246ENST00000496569 LRRIQ1Q96JM4 1722 aa20.09■□□□□ 0.81
HDLBP-246ENST00000496569 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
HDLBP-246ENST00000496569 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
HDLBP-246ENST00000496569 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
HDLBP-246ENST00000496569 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
HDLBP-246ENST00000496569 PCF11O94913 1555 aaKnown RBP20.01■□□□□ 0.79
HDLBP-246ENST00000496569 TTC37Q6PGP7 1564 aa20.01■□□□□ 0.79
HDLBP-246ENST00000496569 FMN1Q68DA7 1419 aa20■□□□□ 0.79
HDLBP-246ENST00000496569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■■■□ 21.9
HDLBP-246ENST00000496569 PLEKHD1A6NEE1 506 aa19.94■□□□□ 0.78
HDLBP-246ENST00000496569 KIF14Q15058 1648 aa19.94■□□□□ 0.78
HDLBP-246ENST00000496569 CLIP1P30622 1438 aa19.92■□□□□ 0.78
HDLBP-246ENST00000496569 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
HDLBP-246ENST00000496569 KDM4FA0A1W2PPD8 638 aa19.9■□□□□ 0.78
HDLBP-246ENST00000496569 ARAP3Q8WWN8 1544 aa19.9■□□□□ 0.78
HDLBP-246ENST00000496569 NEO1Q92859 1461 aa19.87■□□□□ 0.77
HDLBP-246ENST00000496569 MYO5CQ9NQX4 1742 aa19.87■□□□□ 0.77
HDLBP-246ENST00000496569 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
HDLBP-246ENST00000496569 CASKIN1Q8WXD9 1431 aa19.86■□□□□ 0.77
HDLBP-246ENST00000496569 RICTORQ6R327 1708 aa19.85■□□□□ 0.77
HDLBP-246ENST00000496569 CFAP74Q9C0B2 1584 aa19.84■□□□□ 0.77
HDLBP-246ENST00000496569 RAPGEF3O95398 923 aa19.84■□□□□ 0.77
HDLBP-246ENST00000496569 FANCAO15360 1455 aa19.84■□□□□ 0.77
HDLBP-246ENST00000496569 FYCO1Q9BQS8 1478 aa19.82■□□□□ 0.76
HDLBP-246ENST00000496569 TROQ12816 1431 aaPredicted RBP19.82■□□□□ 0.76
HDLBP-246ENST00000496569 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
HDLBP-246ENST00000496569 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
HDLBP-246ENST00000496569 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
HDLBP-246ENST00000496569 CDC42BPBQ9Y5S2 1711 aa19.79■□□□□ 0.76
HDLBP-246ENST00000496569 LOC105371045A0A1W2PR82 267 aa19.78■□□□□ 0.76
HDLBP-246ENST00000496569 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
HDLBP-246ENST00000496569 DENND4BO75064 1496 aaPredicted RBP19.76■□□□□ 0.75
HDLBP-246ENST00000496569 PLCH2O75038 1416 aa19.76■□□□□ 0.75
HDLBP-246ENST00000496569 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
HDLBP-246ENST00000496569 CDC42BPAQ5VT25 1732 aa19.75■□□□□ 0.75
HDLBP-246ENST00000496569 PREX2Q70Z35 1606 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms