RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 MYT1Q01538 1121 aa17.64■□□□□ 0.41
HCN3-204ENST00000496230 CHIC2Q9UKJ5 165 aa17.64■□□□□ 0.41
HCN3-204ENST00000496230 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
HCN3-204ENST00000496230 ERCC6Q03468 1493 aa17.61■□□□□ 0.41
HCN3-204ENST00000496230 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
HCN3-204ENST00000496230 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
HCN3-204ENST00000496230 HIRIP3Q9BW71 556 aaPredicted RBP17.58■□□□□ 0.41
HCN3-204ENST00000496230 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
HCN3-204ENST00000496230 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
HCN3-204ENST00000496230 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
HCN3-204ENST00000496230 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
HCN3-204ENST00000496230 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
HCN3-204ENST00000496230 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
HCN3-204ENST00000496230 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
HCN3-204ENST00000496230 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
HCN3-204ENST00000496230 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
HCN3-204ENST00000496230 RRP7BPQ9NSQ0 103 aa17.51■□□□□ 0.39
HCN3-204ENST00000496230 MIER1Q8N108 512 aa17.48■□□□□ 0.39
HCN3-204ENST00000496230 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
HCN3-204ENST00000496230 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
HCN3-204ENST00000496230 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
HCN3-204ENST00000496230 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
HCN3-204ENST00000496230 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
HCN3-204ENST00000496230 PCF11O94913 1555 aaKnown RBP17.43■□□□□ 0.38
HCN3-204ENST00000496230 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
HCN3-204ENST00000496230 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
HCN3-204ENST00000496230 TIAM1Q13009 1591 aa17.38■□□□□ 0.37
HCN3-204ENST00000496230 FOXD1Q16676 465 aa17.38■□□□□ 0.37
HCN3-204ENST00000496230 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
HCN3-204ENST00000496230 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
HCN3-204ENST00000496230 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
HCN3-204ENST00000496230 FMN1Q68DA7 1419 aa17.33■□□□□ 0.36
HCN3-204ENST00000496230 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
HCN3-204ENST00000496230 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
HCN3-204ENST00000496230 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
HCN3-204ENST00000496230 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
HCN3-204ENST00000496230 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
HCN3-204ENST00000496230 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
HCN3-204ENST00000496230 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
HCN3-204ENST00000496230 CDK13Q14004 1512 aaKnown RBP17.27■□□□□ 0.36
HCN3-204ENST00000496230 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
HCN3-204ENST00000496230 CUL7Q14999 1698 aa17.26■□□□□ 0.35
HCN3-204ENST00000496230 DDX10Q13206 875 aaKnown RBP17.25■□□□□ 0.35
HCN3-204ENST00000496230 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
HCN3-204ENST00000496230 FYCO1Q9BQS8 1478 aa17.22■□□□□ 0.35
HCN3-204ENST00000496230 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
HCN3-204ENST00000496230 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.35
HCN3-204ENST00000496230 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
HCN3-204ENST00000496230 KCNH8Q96L42 1107 aa17.21■□□□□ 0.34
HCN3-204ENST00000496230 CTTNBP2Q8WZ74 1663 aa17.2■□□□□ 0.34
HCN3-204ENST00000496230 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
HCN3-204ENST00000496230 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
HCN3-204ENST00000496230 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
HCN3-204ENST00000496230 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
HCN3-204ENST00000496230 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
HCN3-204ENST00000496230 CFDP1Q9UEE9 299 aaPredicted RBP17.16■□□□□ 0.34
HCN3-204ENST00000496230 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
HCN3-204ENST00000496230 IQGAP2Q13576 1575 aa17.14■□□□□ 0.34
HCN3-204ENST00000496230 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
HCN3-204ENST00000496230 MAGI3Q5TCQ9 1506 aa17.14■□□□□ 0.33
HCN3-204ENST00000496230 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
HCN3-204ENST00000496230 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
HCN3-204ENST00000496230 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
HCN3-204ENST00000496230 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
HCN3-204ENST00000496230 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
HCN3-204ENST00000496230 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
HCN3-204ENST00000496230 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
HCN3-204ENST00000496230 EPRSP07814 1512 aaKnown RBP17.1■□□□□ 0.33
HCN3-204ENST00000496230 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
HCN3-204ENST00000496230 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
HCN3-204ENST00000496230 PLEKHD1A6NEE1 506 aa17.09■□□□□ 0.33
HCN3-204ENST00000496230 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
HCN3-204ENST00000496230 WDR62O43379 1518 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
HCN3-204ENST00000496230 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
HCN3-204ENST00000496230 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
HCN3-204ENST00000496230 KIAA0586Q9BVV6 1533 aa17.05■□□□□ 0.32
HCN3-204ENST00000496230 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
HCN3-204ENST00000496230 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
HCN3-204ENST00000496230 CFAP43Q8NDM7 1665 aa17.04■□□□□ 0.32
HCN3-204ENST00000496230 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
HCN3-204ENST00000496230 PPP1R15AO75807 674 aaPredicted RBP17.04■□□□□ 0.32
HCN3-204ENST00000496230 MPHOSPH9Q99550 1183 aa17.03■□□□□ 0.32
HCN3-204ENST00000496230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.322e-10■■■□□ 18.1
HCN3-204ENST00000496230 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
HCN3-204ENST00000496230 NAIPQ13075 1403 aa17■□□□□ 0.31
HCN3-204ENST00000496230 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
HCN3-204ENST00000496230 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
HCN3-204ENST00000496230 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
HCN3-204ENST00000496230 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
HCN3-204ENST00000496230 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
HCN3-204ENST00000496230 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
HCN3-204ENST00000496230 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
HCN3-204ENST00000496230 SUPT6HQ7KZ85 1726 aaKnown RBP16.95■□□□□ 0.3
HCN3-204ENST00000496230 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
HCN3-204ENST00000496230 PTPRGP23470 1445 aa16.94■□□□□ 0.3
HCN3-204ENST00000496230 EHBP1L1Q8N3D4 1523 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms