RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 CSRNP3Q8WYN3 585 aa33.42■■■□□ 2.94
LMO4-204ENST00000495705 SHROOM2Q13796 1616 aa33.4■■■□□ 2.94
LMO4-204ENST00000495705 KIAA0586Q9BVV6 1533 aa33.39■■■□□ 2.94
LMO4-204ENST00000495705 FAM9AQ8IZU1 332 aaPredicted RBP33.31■■■□□ 2.92
LMO4-204ENST00000495705 IQGAP2Q13576 1575 aa33.26■■■□□ 2.92
LMO4-204ENST00000495705 JPH4Q96JJ6 628 aa33.25■■■□□ 2.91
LMO4-204ENST00000495705 CTTNBP2Q8WZ74 1663 aa33.25■■■□□ 2.91
LMO4-204ENST00000495705 KIF21BO75037 1637 aa33.23■■■□□ 2.91
LMO4-204ENST00000495705 ARAP1Q96P48 1450 aa33.22■■■□□ 2.91
LMO4-204ENST00000495705 PRG4Q92954 1404 aaPredicted RBP33.2■■■□□ 2.91
LMO4-204ENST00000495705 ERCC6L2Q5T890 1561 aa33.19■■■□□ 2.9
LMO4-204ENST00000495705 CYB5RLQ6IPT4 315 aa33.09■■■□□ 2.89
LMO4-204ENST00000495705 UGGT2Q9NYU1 1516 aa33.07■■■□□ 2.89
LMO4-204ENST00000495705 CARMIL2Q6F5E8 1435 aa33.04■■■□□ 2.88
LMO4-204ENST00000495705 GOLGA3Q08378 1498 aa33.02■■■□□ 2.88
LMO4-204ENST00000495705 DISP1Q96F81 1524 aa32.97■■■□□ 2.87
LMO4-204ENST00000495705 KIAA0556O60303 1618 aa32.94■■■□□ 2.86
LMO4-204ENST00000495705 TNIKQ9UKE5 1360 aa32.89■■■□□ 2.86
LMO4-204ENST00000495705 UBTFP17480 764 aaKnown RBP32.84■■■□□ 2.85
LMO4-204ENST00000495705 PTPRGP23470 1445 aa32.84■■■□□ 2.85
LMO4-204ENST00000495705 EHMT2Q96KQ7 1210 aa32.82■■■□□ 2.84
LMO4-204ENST00000495705 SAMD9Q5K651 1589 aa32.8■■■□□ 2.84
LMO4-204ENST00000495705 EFCAB5A4FU69 1503 aa32.72■■■□□ 2.83
LMO4-204ENST00000495705 TTBK1Q5TCY1 1321 aaPredicted RBP32.71■■■□□ 2.83
LMO4-204ENST00000495705 ADCY10Q96PN6 1610 aa32.7■■■□□ 2.83
LMO4-204ENST00000495705 RANGAP1P46060 587 aaPredicted RBP32.64■■■□□ 2.82
LMO4-204ENST00000495705 UACAQ9BZF9 1416 aa32.64■■■□□ 2.82
LMO4-204ENST00000495705 UHRF1BP1LA0JNW5 1464 aa32.63■■■□□ 2.81
LMO4-204ENST00000495705 ABCC2Q92887 1545 aa32.61■■■□□ 2.81
LMO4-204ENST00000495705 P3H3Q8IVL6 736 aa32.61■■■□□ 2.81
LMO4-204ENST00000495705 FHOD3Q2V2M9 1422 aa32.56■■■□□ 2.8
LMO4-204ENST00000495705 ABCA8O94911 1581 aa32.55■■■□□ 2.8
LMO4-204ENST00000495705 NPM1P06748 294 aaKnown RBP eCLIP32.55■■■□□ 2.8
LMO4-204ENST00000495705 PLB1Q6P1J6 1458 aa32.54■■■□□ 2.8
LMO4-204ENST00000495705 ARHGAP35Q9NRY4 1499 aa32.52■■■□□ 2.8
LMO4-204ENST00000495705 MAPKBP1O60336 1514 aa32.48■■■□□ 2.79
LMO4-204ENST00000495705 KDM5BQ9UGL1 1544 aa32.46■■■□□ 2.79
LMO4-204ENST00000495705 RAPGEF6Q8TEU7 1601 aa32.44■■■□□ 2.78
LMO4-204ENST00000495705 ZCCHC11Q5TAX3 1644 aaKnown RBP32.41■■■□□ 2.78
LMO4-204ENST00000495705 CLIP1P30622 1438 aa32.41■■■□□ 2.78
LMO4-204ENST00000495705 FMN1Q68DA7 1419 aa32.39■■■□□ 2.78
LMO4-204ENST00000495705 LOC105371045A0A1W2PR82 267 aa32.35■■■□□ 2.77
LMO4-204ENST00000495705 TRHP20396 242 aaPredicted RBP32.35■■■□□ 2.77
LMO4-204ENST00000495705 CEP162Q5TB80 1403 aa32.31■■■□□ 2.76
LMO4-204ENST00000495705 ASXL2Q76L83 1435 aa32.29■■■□□ 2.76
LMO4-204ENST00000495705 NUP153P49790 1475 aaKnown RBP32.29■■■□□ 2.76
LMO4-204ENST00000495705 ABCC10Q5T3U5 1492 aa32.27■■■□□ 2.76
LMO4-204ENST00000495705 KIF13AQ9H1H9 1805 aa32.26■■■□□ 2.75
LMO4-204ENST00000495705 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
LMO4-204ENST00000495705 ATP10BO94823 1461 aa32.24■■■□□ 2.75
LMO4-204ENST00000495705 HECW1Q76N89 1606 aa32.24■■■□□ 2.75
LMO4-204ENST00000495705 WDR7Q9Y4E6 1490 aa32.19■■■□□ 2.74
LMO4-204ENST00000495705 ARID3CA6NKF2 412 aa32.17■■■□□ 2.74
LMO4-204ENST00000495705 PCF11O94913 1555 aaKnown RBP32.15■■■□□ 2.74
LMO4-204ENST00000495705 CASKIN1Q8WXD9 1431 aa32.14■■■□□ 2.74
LMO4-204ENST00000495705 FAM69CQ0P6D2 419 aa32.13■■■□□ 2.73
LMO4-204ENST00000495705 GLI2P10070 1586 aa32.12■■■□□ 2.73
LMO4-204ENST00000495705 EPRSP07814 1512 aaKnown RBP32.11■■■□□ 2.73
LMO4-204ENST00000495705 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
LMO4-204ENST00000495705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.1■■■□□ 2.73
LMO4-204ENST00000495705 HNRNPUL2Q1KMD3 747 aaKnown RBP32.1■■■□□ 2.73
LMO4-204ENST00000495705 ATP1B4Q9UN42 357 aaPredicted RBP32.08■■■□□ 2.73
LMO4-204ENST00000495705 CDK13Q14004 1512 aaKnown RBP32.08■■■□□ 2.73
LMO4-204ENST00000495705 LRRIQ1Q96JM4 1722 aa32.04■■■□□ 2.72
LMO4-204ENST00000495705 CCDC18Q5T9S5 1454 aa32.03■■■□□ 2.72
LMO4-204ENST00000495705 PLEKHD1A6NEE1 506 aa31.99■■■□□ 2.71
LMO4-204ENST00000495705 MAP3K4Q9Y6R4 1608 aa31.99■■■□□ 2.71
LMO4-204ENST00000495705 CFAP43Q8NDM7 1665 aa31.96■■■□□ 2.71
LMO4-204ENST00000495705 KCNH8Q96L42 1107 aa31.96■■■□□ 2.71
LMO4-204ENST00000495705 TSPOAP1O95153 1857 aa31.95■■■□□ 2.7
LMO4-204ENST00000495705 CDK11AQ9UQ88 783 aaPredicted RBP31.94■■■□□ 2.7
LMO4-204ENST00000495705 VPS8Q8N3P4 1428 aa31.93■■■□□ 2.7
LMO4-204ENST00000495705 ABCA9Q8IUA7 1624 aa31.9■■■□□ 2.7
LMO4-204ENST00000495705 PPRC1Q5VV67 1664 aaKnown RBP31.88■■■□□ 2.69
LMO4-204ENST00000495705 TROQ12816 1431 aaPredicted RBP31.84■■■□□ 2.69
LMO4-204ENST00000495705 CD109Q6YHK3 1445 aa31.84■■■□□ 2.69
LMO4-204ENST00000495705 TEX14Q8IWB6 1497 aa31.83■■■□□ 2.69
LMO4-204ENST00000495705 MAGI3Q5TCQ9 1506 aa31.81■■■□□ 2.68
LMO4-204ENST00000495705 KIF14Q15058 1648 aa31.8■■■□□ 2.68
LMO4-204ENST00000495705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.78■■■□□ 2.681e-6■□□□□ 10.3
LMO4-204ENST00000495705 TTC37Q6PGP7 1564 aa31.76■■■□□ 2.67
LMO4-204ENST00000495705 TIAM1Q13009 1591 aa31.7■■■□□ 2.67
LMO4-204ENST00000495705 KDM6BO15054 1643 aa31.67■■■□□ 2.66
LMO4-204ENST00000495705 EHBP1L1Q8N3D4 1523 aa31.67■■■□□ 2.66
LMO4-204ENST00000495705 MTUS2Q5JR59 1369 aa31.67■■■□□ 2.66
LMO4-204ENST00000495705 MYO5CQ9NQX4 1742 aa31.66■■■□□ 2.66
LMO4-204ENST00000495705 MAP3K1Q13233 1512 aa31.65■■■□□ 2.66
LMO4-204ENST00000495705 NEO1Q92859 1461 aa31.62■■■□□ 2.65
LMO4-204ENST00000495705 CFAP74Q9C0B2 1584 aa31.62■■■□□ 2.65
LMO4-204ENST00000495705 ARAP3Q8WWN8 1544 aa31.6■■■□□ 2.65
LMO4-204ENST00000495705 PHLDB1Q86UU1 1377 aa31.6■■■□□ 2.65
LMO4-204ENST00000495705 PLCH2O75038 1416 aa31.59■■■□□ 2.65
LMO4-204ENST00000495705 FANCAO15360 1455 aa31.56■■■□□ 2.64
LMO4-204ENST00000495705 PREX2Q70Z35 1606 aa31.54■■■□□ 2.64
LMO4-204ENST00000495705 APLP2Q06481 763 aa31.54■■■□□ 2.64
LMO4-204ENST00000495705 LRRC9Q6ZRR7 1453 aa31.53■■■□□ 2.64
LMO4-204ENST00000495705 SUPT6HQ7KZ85 1726 aaKnown RBP31.52■■■□□ 2.64
LMO4-204ENST00000495705 CDC42BPAQ5VT25 1732 aa31.52■■■□□ 2.64
LMO4-204ENST00000495705 COL17A1Q9UMD9 1497 aaPredicted RBP31.5■■■□□ 2.63
LMO4-204ENST00000495705 CDC42BPBQ9Y5S2 1711 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms