RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
CHPF2-204ENST00000495645 HNRNPUL2Q1KMD3 747 aaKnown RBP22.77■■□□□ 1.24
CHPF2-204ENST00000495645 FHOD3Q2V2M9 1422 aa22.75■■□□□ 1.23
CHPF2-204ENST00000495645 FBLN2P98095 1184 aa22.71■■□□□ 1.23
CHPF2-204ENST00000495645 CUL7Q14999 1698 aa22.65■■□□□ 1.22
CHPF2-204ENST00000495645 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
CHPF2-204ENST00000495645 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
CHPF2-204ENST00000495645 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
CHPF2-204ENST00000495645 CCER1Q8TC90 406 aaPredicted RBP22.58■■□□□ 1.21
CHPF2-204ENST00000495645 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.21
CHPF2-204ENST00000495645 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
CHPF2-204ENST00000495645 ITGAEP38570 1179 aa22.57■■□□□ 1.2
CHPF2-204ENST00000495645 PBRM1Q86U86 1689 aa22.57■■□□□ 1.2
CHPF2-204ENST00000495645 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
CHPF2-204ENST00000495645 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
CHPF2-204ENST00000495645 ADAMTS12P58397 1594 aa22.51■■□□□ 1.19
CHPF2-204ENST00000495645 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
CHPF2-204ENST00000495645 PCF11O94913 1555 aaKnown RBP22.49■■□□□ 1.19
CHPF2-204ENST00000495645 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
CHPF2-204ENST00000495645 TIAM1Q13009 1591 aa22.39■■□□□ 1.17
CHPF2-204ENST00000495645 PHLDB1Q86UU1 1377 aa22.38■■□□□ 1.17
CHPF2-204ENST00000495645 EFCAB5A4FU69 1503 aa22.37■■□□□ 1.17
CHPF2-204ENST00000495645 LRRC9Q6ZRR7 1453 aa22.37■■□□□ 1.17
CHPF2-204ENST00000495645 IQGAP2Q13576 1575 aa22.35■■□□□ 1.17
CHPF2-204ENST00000495645 CASKIN1Q8WXD9 1431 aa22.35■■□□□ 1.17
CHPF2-204ENST00000495645 ZEB1P37275 1124 aaPredicted RBP22.35■■□□□ 1.17
CHPF2-204ENST00000495645 FAM50AQ14320 339 aaKnown RBP22.34■■□□□ 1.17
CHPF2-204ENST00000495645 SAMD9Q5K651 1589 aa22.34■■□□□ 1.17
CHPF2-204ENST00000495645 FMN1Q68DA7 1419 aa22.33■■□□□ 1.17
CHPF2-204ENST00000495645 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
CHPF2-204ENST00000495645 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
CHPF2-204ENST00000495645 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
CHPF2-204ENST00000495645 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
CHPF2-204ENST00000495645 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
CHPF2-204ENST00000495645 KIAA0586Q9BVV6 1533 aa22.27■■□□□ 1.16
CHPF2-204ENST00000495645 JPH4Q96JJ6 628 aa22.27■■□□□ 1.16
CHPF2-204ENST00000495645 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
CHPF2-204ENST00000495645 RRBP1Q9P2E9 1410 aaKnown RBP22.25■■□□□ 1.15
CHPF2-204ENST00000495645 DISP1Q96F81 1524 aa22.25■■□□□ 1.15
CHPF2-204ENST00000495645 LRRIQ1Q96JM4 1722 aa22.22■■□□□ 1.15
CHPF2-204ENST00000495645 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
CHPF2-204ENST00000495645 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
CHPF2-204ENST00000495645 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
CHPF2-204ENST00000495645 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
CHPF2-204ENST00000495645 UGGT2Q9NYU1 1516 aa22.17■■□□□ 1.14
CHPF2-204ENST00000495645 CFAP43Q8NDM7 1665 aa22.16■■□□□ 1.14
CHPF2-204ENST00000495645 NUP160Q12769 1436 aa22.14■■□□□ 1.13
CHPF2-204ENST00000495645 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.13
CHPF2-204ENST00000495645 KIAA0556O60303 1618 aa22.12■■□□□ 1.13
CHPF2-204ENST00000495645 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
CHPF2-204ENST00000495645 NCOA2Q15596 1464 aa22.08■■□□□ 1.13
CHPF2-204ENST00000495645 CHD1O14646 1710 aa22.06■■□□□ 1.12
CHPF2-204ENST00000495645 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
CHPF2-204ENST00000495645 SCAF1Q9H7N4 1312 aaKnown RBP22.04■■□□□ 1.12
CHPF2-204ENST00000495645 PRG4Q92954 1404 aaPredicted RBP22.03■■□□□ 1.12
CHPF2-204ENST00000495645 CHIC2Q9UKJ5 165 aa22.03■■□□□ 1.12
CHPF2-204ENST00000495645 FGD6Q6ZV73 1430 aa22.03■■□□□ 1.12
CHPF2-204ENST00000495645 RAB3GAP2Q9H2M9 1393 aa22.02■■□□□ 1.12
CHPF2-204ENST00000495645 DHX57Q6P158 1386 aaKnown RBP22.02■■□□□ 1.12
CHPF2-204ENST00000495645 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
CHPF2-204ENST00000495645 PTPRKQ15262 1439 aa22■■□□□ 1.11
CHPF2-204ENST00000495645 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
CHPF2-204ENST00000495645 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
CHPF2-204ENST00000495645 CARMIL2Q6F5E8 1435 aa21.98■■□□□ 1.11
CHPF2-204ENST00000495645 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
CHPF2-204ENST00000495645 MYOM3Q5VTT5 1437 aa21.95■■□□□ 1.1
CHPF2-204ENST00000495645 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.1
CHPF2-204ENST00000495645 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
CHPF2-204ENST00000495645 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
CHPF2-204ENST00000495645 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
CHPF2-204ENST00000495645 EHBP1L1Q8N3D4 1523 aa21.92■■□□□ 1.1
CHPF2-204ENST00000495645 ZNF777Q9ULD5 760 aaPredicted RBP21.91■■□□□ 1.1
CHPF2-204ENST00000495645 PTPRGP23470 1445 aa21.9■■□□□ 1.1
CHPF2-204ENST00000495645 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.1
CHPF2-204ENST00000495645 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
CHPF2-204ENST00000495645 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
CHPF2-204ENST00000495645 SIN3AQ96ST3 1273 aa21.85■■□□□ 1.09
CHPF2-204ENST00000495645 CDK11AQ9UQ88 783 aaPredicted RBP21.85■■□□□ 1.09
CHPF2-204ENST00000495645 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
CHPF2-204ENST00000495645 ATP10BO94823 1461 aa21.83■■□□□ 1.08
CHPF2-204ENST00000495645 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
CHPF2-204ENST00000495645 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
CHPF2-204ENST00000495645 PTPN23Q9H3S7 1636 aa21.8■■□□□ 1.08
CHPF2-204ENST00000495645 SHROOM2Q13796 1616 aa21.78■■□□□ 1.08
CHPF2-204ENST00000495645 CFDP1Q9UEE9 299 aaPredicted RBP21.78■■□□□ 1.08
CHPF2-204ENST00000495645 KIF14Q15058 1648 aa21.78■■□□□ 1.08
CHPF2-204ENST00000495645 TROQ12816 1431 aaPredicted RBP21.77■■□□□ 1.08
CHPF2-204ENST00000495645 KCNH8Q96L42 1107 aa21.77■■□□□ 1.07
CHPF2-204ENST00000495645 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
CHPF2-204ENST00000495645 ABCA8O94911 1581 aa21.76■■□□□ 1.07
CHPF2-204ENST00000495645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.073e-13■■■■■ 62.4
CHPF2-204ENST00000495645 MAPKBP1O60336 1514 aa21.73■■□□□ 1.07
CHPF2-204ENST00000495645 NAIPQ13075 1403 aa21.72■■□□□ 1.07
CHPF2-204ENST00000495645 UACAQ9BZF9 1416 aa21.69■■□□□ 1.06
CHPF2-204ENST00000495645 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
CHPF2-204ENST00000495645 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
CHPF2-204ENST00000495645 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
CHPF2-204ENST00000495645 GPATCH8Q9UKJ3 1502 aaKnown RBP21.69■■□□□ 1.06
CHPF2-204ENST00000495645 FOXD1Q16676 465 aa21.69■■□□□ 1.06
CHPF2-204ENST00000495645 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms