RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.37■□□□□ 0.055e-25■■■■■ 523.4
CHPF2-204ENST00000495645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.073e-13■■■■■ 62.4
CHPF2-204ENST00000495645 PCBP1Q15365 356 aaKnown RBP eCLIP15.54■□□□□ 0.081e-7■■■■■ 51.9
CHPF2-204ENST00000495645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■■■■ 50.2
CHPF2-204ENST00000495645 DDX3XO00571 662 aaKnown RBP eCLIP16.07■□□□□ 0.163e-13■■■■■ 43.3
CHPF2-204ENST00000495645 RBM15Q96T37 977 aaKnown RBP eCLIP15.4■□□□□ 0.062e-7■■■■■ 34.7
CHPF2-204ENST00000495645 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.541e-6■■■■■ 30.7
CHPF2-204ENST00000495645 HNRNPKP61978 463 aaKnown RBP eCLIP13.88□□□□□ -0.199e-8■■■■■ 29.6
CHPF2-204ENST00000495645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■■■■□ 23.7
CHPF2-204ENST00000495645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.43■■□□□ 1.026e-7■■■■□ 20.4
CHPF2-204ENST00000495645 TIA1P31483 386 aaKnown RBP eCLIP14.18□□□□□ -0.147e-17■■■□□ 19.2
CHPF2-204ENST00000495645 SRSF9Q13242 221 aaKnown RBP eCLIP10.66□□□□□ -0.77e-7■■■□□ 17.7
CHPF2-204ENST00000495645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■■□□ 17.4
CHPF2-204ENST00000495645 SRSF1Q07955 248 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■■□□ 17.1
CHPF2-204ENST00000495645 SND1Q7KZF4 910 aaKnown RBP eCLIP15.88■□□□□ 0.135e-7■■■□□ 16.9
CHPF2-204ENST00000495645 EWSR1Q01844 656 aaKnown RBP eCLIP12.31□□□□□ -0.443e-7■■■□□ 15.4
CHPF2-204ENST00000495645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.47■□□□□ 0.071e-8■■■□□ 15.3
CHPF2-204ENST00000495645 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.274e-7■■■□□ 15.2
CHPF2-204ENST00000495645 HNRNPMP52272 730 aaKnown RBP eCLIP21.64■■□□□ 1.065e-13■■■□□ 14.8
CHPF2-204ENST00000495645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.03□□□□□ -0.482e-9■■□□□ 14.3
CHPF2-204ENST00000495645 PCBP2Q15366 365 aaKnown RBP eCLIP14.46□□□□□ -0.095e-7■■□□□ 14
CHPF2-204ENST00000495645 PPIGQ13427 754 aaKnown RBP eCLIP14.93□□□□□ -0.024e-6■■□□□ 13.2
CHPF2-204ENST00000495645 EIF3HO15372 352 aaKnown RBP eCLIP15.68■□□□□ 0.11e-6■■□□□ 11.9
CHPF2-204ENST00000495645 NOLC1Q14978 699 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■■□□□ 11.8
CHPF2-204ENST00000495645 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.9□□□□□ -0.183e-7■■□□□ 11.5
CHPF2-204ENST00000495645 RPS3P23396 243 aaKnown RBP eCLIP14.53□□□□□ -0.082e-7■□□□□ 10.7
CHPF2-204ENST00000495645 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■□□□□ 10
CHPF2-204ENST00000495645 NONOQ15233 471 aaKnown RBP eCLIP16.82■□□□□ 0.285e-7■□□□□ 9.9
CHPF2-204ENST00000495645 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.48■□□□□ 0.078e-6■□□□□ 9
CHPF2-204ENST00000495645 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.091e-22■□□□□ 8.8
CHPF2-204ENST00000495645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 16e-6■□□□□ 8.3
Retrieved 31 of 31 RNA–protein pairs in 8.9 ms