RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 NUP160Q12769 1436 aa18.44■□□□□ 0.54
SLC13A3-211ENST00000495082 CLIP1P30622 1438 aa18.42■□□□□ 0.54
SLC13A3-211ENST00000495082 KIAA0586Q9BVV6 1533 aa18.41■□□□□ 0.54
SLC13A3-211ENST00000495082 CEP170Q5SW79 1584 aa18.4■□□□□ 0.54
SLC13A3-211ENST00000495082 CHD1O14646 1710 aa18.39■□□□□ 0.53
SLC13A3-211ENST00000495082 IQGAP2Q13576 1575 aa18.37■□□□□ 0.53
SLC13A3-211ENST00000495082 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.53
SLC13A3-211ENST00000495082 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.52
SLC13A3-211ENST00000495082 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
SLC13A3-211ENST00000495082 UGGT2Q9NYU1 1516 aa18.31■□□□□ 0.52
SLC13A3-211ENST00000495082 SAMD9Q5K651 1589 aa18.28■□□□□ 0.52
SLC13A3-211ENST00000495082 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
SLC13A3-211ENST00000495082 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
SLC13A3-211ENST00000495082 JPH4Q96JJ6 628 aa18.24■□□□□ 0.51
SLC13A3-211ENST00000495082 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
SLC13A3-211ENST00000495082 DISP1Q96F81 1524 aa18.22■□□□□ 0.51
SLC13A3-211ENST00000495082 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
SLC13A3-211ENST00000495082 FHOD3Q2V2M9 1422 aa18.2■□□□□ 0.5
SLC13A3-211ENST00000495082 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
SLC13A3-211ENST00000495082 KIAA0556O60303 1618 aa18.19■□□□□ 0.5
SLC13A3-211ENST00000495082 CARMIL2Q6F5E8 1435 aa18.18■□□□□ 0.5
SLC13A3-211ENST00000495082 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
SLC13A3-211ENST00000495082 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
SLC13A3-211ENST00000495082 PRG4Q92954 1404 aaPredicted RBP18.15■□□□□ 0.5
SLC13A3-211ENST00000495082 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.49
SLC13A3-211ENST00000495082 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
SLC13A3-211ENST00000495082 PCF11O94913 1555 aaKnown RBP18.06■□□□□ 0.48
SLC13A3-211ENST00000495082 ERCC6L2Q5T890 1561 aa18.04■□□□□ 0.48
SLC13A3-211ENST00000495082 PTPRGP23470 1445 aa18.02■□□□□ 0.47
SLC13A3-211ENST00000495082 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
SLC13A3-211ENST00000495082 APLP2Q06481 763 aa18■□□□□ 0.47
SLC13A3-211ENST00000495082 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
SLC13A3-211ENST00000495082 RAPGEF6Q8TEU7 1601 aa17.97■□□□□ 0.47
SLC13A3-211ENST00000495082 PLB1Q6P1J6 1458 aa17.96■□□□□ 0.47
SLC13A3-211ENST00000495082 ABCA8O94911 1581 aa17.96■□□□□ 0.47
SLC13A3-211ENST00000495082 TTBK1Q5TCY1 1321 aaPredicted RBP17.96■□□□□ 0.46
SLC13A3-211ENST00000495082 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
SLC13A3-211ENST00000495082 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
SLC13A3-211ENST00000495082 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
SLC13A3-211ENST00000495082 NUP153P49790 1475 aaKnown RBP17.93■□□□□ 0.46
SLC13A3-211ENST00000495082 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
SLC13A3-211ENST00000495082 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
SLC13A3-211ENST00000495082 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
SLC13A3-211ENST00000495082 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
SLC13A3-211ENST00000495082 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.45
SLC13A3-211ENST00000495082 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
SLC13A3-211ENST00000495082 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
SLC13A3-211ENST00000495082 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
SLC13A3-211ENST00000495082 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
SLC13A3-211ENST00000495082 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
SLC13A3-211ENST00000495082 CDK13Q14004 1512 aaKnown RBP17.85■□□□□ 0.45
SLC13A3-211ENST00000495082 ATP10BO94823 1461 aa17.83■□□□□ 0.44
SLC13A3-211ENST00000495082 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
SLC13A3-211ENST00000495082 RIMBP3CA6NJZ7 1639 aa17.8■□□□□ 0.44
SLC13A3-211ENST00000495082 RIMBP3BA6NNM3 1639 aa17.8■□□□□ 0.44
SLC13A3-211ENST00000495082 RIMBP3Q9UFD9 1639 aa17.8■□□□□ 0.44
SLC13A3-211ENST00000495082 ARID3CA6NKF2 412 aa17.8■□□□□ 0.44
SLC13A3-211ENST00000495082 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
SLC13A3-211ENST00000495082 EHBP1L1Q8N3D4 1523 aa17.79■□□□□ 0.44
SLC13A3-211ENST00000495082 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
SLC13A3-211ENST00000495082 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
SLC13A3-211ENST00000495082 ADCY10Q96PN6 1610 aa17.78■□□□□ 0.44
SLC13A3-211ENST00000495082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
SLC13A3-211ENST00000495082 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
SLC13A3-211ENST00000495082 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
SLC13A3-211ENST00000495082 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
SLC13A3-211ENST00000495082 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
SLC13A3-211ENST00000495082 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
SLC13A3-211ENST00000495082 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.43
SLC13A3-211ENST00000495082 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
SLC13A3-211ENST00000495082 NCOA2Q15596 1464 aa17.7■□□□□ 0.42
SLC13A3-211ENST00000495082 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
SLC13A3-211ENST00000495082 PHLDB1Q86UU1 1377 aa17.67■□□□□ 0.42
SLC13A3-211ENST00000495082 RRBP1Q9P2E9 1410 aaKnown RBP17.65■□□□□ 0.42
SLC13A3-211ENST00000495082 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
SLC13A3-211ENST00000495082 KIF14Q15058 1648 aa17.63■□□□□ 0.41
SLC13A3-211ENST00000495082 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
SLC13A3-211ENST00000495082 WDR7Q9Y4E6 1490 aa17.62■□□□□ 0.41
SLC13A3-211ENST00000495082 ABCC10Q5T3U5 1492 aa17.6■□□□□ 0.41
SLC13A3-211ENST00000495082 ASXL2Q76L83 1435 aa17.6■□□□□ 0.41
SLC13A3-211ENST00000495082 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
SLC13A3-211ENST00000495082 FGD6Q6ZV73 1430 aa17.59■□□□□ 0.41
SLC13A3-211ENST00000495082 PCGF6Q9BYE7 350 aa17.58■□□□□ 0.41
SLC13A3-211ENST00000495082 MIA2Q96PC5 1412 aa17.58■□□□□ 0.4
SLC13A3-211ENST00000495082 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
SLC13A3-211ENST00000495082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
SLC13A3-211ENST00000495082 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
SLC13A3-211ENST00000495082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.54■□□□□ 0.4
SLC13A3-211ENST00000495082 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
SLC13A3-211ENST00000495082 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
SLC13A3-211ENST00000495082 TCOF1Q13428 1488 aaKnown RBP17.52■□□□□ 0.4
SLC13A3-211ENST00000495082 TTC37Q6PGP7 1564 aa17.52■□□□□ 0.39
SLC13A3-211ENST00000495082 CFDP1Q9UEE9 299 aaPredicted RBP17.5■□□□□ 0.39
SLC13A3-211ENST00000495082 PTPN23Q9H3S7 1636 aa17.49■□□□□ 0.39
SLC13A3-211ENST00000495082 CDC42BPAQ5VT25 1732 aa17.49■□□□□ 0.39
SLC13A3-211ENST00000495082 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
SLC13A3-211ENST00000495082 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
SLC13A3-211ENST00000495082 FAM50AQ14320 339 aaKnown RBP17.48■□□□□ 0.39
SLC13A3-211ENST00000495082 PLCH2O75038 1416 aa17.47■□□□□ 0.39
SLC13A3-211ENST00000495082 ARAP3Q8WWN8 1544 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms