RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
SLC13A3-211ENST00000495082 CCDC180Q9P1Z9 1646 aa23.52■■□□□ 1.36
SLC13A3-211ENST00000495082 ZCCHC6Q5VYS8 1495 aaKnown RBP22.46■■□□□ 1.19
SLC13A3-211ENST00000495082 ABCC9O60706 1549 aa22.42■■□□□ 1.18
SLC13A3-211ENST00000495082 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
SLC13A3-211ENST00000495082 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
SLC13A3-211ENST00000495082 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
SLC13A3-211ENST00000495082 NACADO15069 1562 aa21.99■■□□□ 1.11
SLC13A3-211ENST00000495082 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
SLC13A3-211ENST00000495082 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
SLC13A3-211ENST00000495082 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
SLC13A3-211ENST00000495082 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
SLC13A3-211ENST00000495082 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
SLC13A3-211ENST00000495082 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
SLC13A3-211ENST00000495082 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
SLC13A3-211ENST00000495082 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
SLC13A3-211ENST00000495082 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
SLC13A3-211ENST00000495082 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
SLC13A3-211ENST00000495082 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
SLC13A3-211ENST00000495082 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
SLC13A3-211ENST00000495082 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
SLC13A3-211ENST00000495082 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
SLC13A3-211ENST00000495082 WIZO95785 1651 aa20.43■□□□□ 0.86
SLC13A3-211ENST00000495082 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
SLC13A3-211ENST00000495082 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
SLC13A3-211ENST00000495082 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
SLC13A3-211ENST00000495082 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
SLC13A3-211ENST00000495082 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
SLC13A3-211ENST00000495082 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
SLC13A3-211ENST00000495082 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
SLC13A3-211ENST00000495082 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
SLC13A3-211ENST00000495082 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
SLC13A3-211ENST00000495082 CFTRP13569 1480 aa19.76■□□□□ 0.75
SLC13A3-211ENST00000495082 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
SLC13A3-211ENST00000495082 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
SLC13A3-211ENST00000495082 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
SLC13A3-211ENST00000495082 NESP48681 1621 aa19.59■□□□□ 0.73
SLC13A3-211ENST00000495082 PRDM2Q13029 1718 aa19.58■□□□□ 0.73
SLC13A3-211ENST00000495082 PDS5BQ9NTI5 1447 aa19.5■□□□□ 0.71
SLC13A3-211ENST00000495082 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
SLC13A3-211ENST00000495082 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
SLC13A3-211ENST00000495082 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
SLC13A3-211ENST00000495082 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
SLC13A3-211ENST00000495082 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
SLC13A3-211ENST00000495082 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
SLC13A3-211ENST00000495082 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
SLC13A3-211ENST00000495082 CUX1P39880 1505 aa19.34■□□□□ 0.69
SLC13A3-211ENST00000495082 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
SLC13A3-211ENST00000495082 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
SLC13A3-211ENST00000495082 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
SLC13A3-211ENST00000495082 ERCC6Q03468 1493 aa19.27■□□□□ 0.68
SLC13A3-211ENST00000495082 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
SLC13A3-211ENST00000495082 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
SLC13A3-211ENST00000495082 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
SLC13A3-211ENST00000495082 WDR62O43379 1518 aa19.18■□□□□ 0.66
SLC13A3-211ENST00000495082 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
SLC13A3-211ENST00000495082 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
SLC13A3-211ENST00000495082 POLA1P09884 1462 aaPredicted RBP19.14■□□□□ 0.65
SLC13A3-211ENST00000495082 SOGA1O94964 1423 aa19.07■□□□□ 0.64
SLC13A3-211ENST00000495082 EEA1Q15075 1411 aa19.07■□□□□ 0.64
SLC13A3-211ENST00000495082 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
SLC13A3-211ENST00000495082 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
SLC13A3-211ENST00000495082 CUX2O14529 1486 aa19.02■□□□□ 0.64
SLC13A3-211ENST00000495082 KIF27Q86VH2 1401 aa19■□□□□ 0.63
SLC13A3-211ENST00000495082 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
SLC13A3-211ENST00000495082 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
SLC13A3-211ENST00000495082 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
SLC13A3-211ENST00000495082 FAM9AQ8IZU1 332 aaPredicted RBP18.97■□□□□ 0.63
SLC13A3-211ENST00000495082 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
SLC13A3-211ENST00000495082 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
SLC13A3-211ENST00000495082 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
SLC13A3-211ENST00000495082 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
SLC13A3-211ENST00000495082 IGF1RP08069 1367 aa18.86■□□□□ 0.61
SLC13A3-211ENST00000495082 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
SLC13A3-211ENST00000495082 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
SLC13A3-211ENST00000495082 PRXQ9BXM0 1461 aa18.82■□□□□ 0.6
SLC13A3-211ENST00000495082 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
SLC13A3-211ENST00000495082 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.6
SLC13A3-211ENST00000495082 KIF21BO75037 1637 aa18.8■□□□□ 0.6
SLC13A3-211ENST00000495082 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
SLC13A3-211ENST00000495082 GRIN2BQ13224 1484 aa18.77■□□□□ 0.6
SLC13A3-211ENST00000495082 LOC105371045A0A1W2PR82 267 aa18.77■□□□□ 0.6
SLC13A3-211ENST00000495082 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
SLC13A3-211ENST00000495082 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
SLC13A3-211ENST00000495082 CUL7Q14999 1698 aa18.74■□□□□ 0.59
SLC13A3-211ENST00000495082 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
SLC13A3-211ENST00000495082 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
SLC13A3-211ENST00000495082 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
SLC13A3-211ENST00000495082 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
SLC13A3-211ENST00000495082 ADAMTS12P58397 1594 aa18.66■□□□□ 0.58
SLC13A3-211ENST00000495082 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
SLC13A3-211ENST00000495082 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
SLC13A3-211ENST00000495082 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
SLC13A3-211ENST00000495082 UBTFP17480 764 aaKnown RBP18.61■□□□□ 0.57
SLC13A3-211ENST00000495082 SYNJ2O15056 1496 aa18.58■□□□□ 0.56
SLC13A3-211ENST00000495082 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
SLC13A3-211ENST00000495082 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
SLC13A3-211ENST00000495082 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
SLC13A3-211ENST00000495082 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
SLC13A3-211ENST00000495082 FBLN2P98095 1184 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms