RNA–Protein interactions for RNA: ENST00000495016.5

CDK11A-221, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 286 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-221ENST00000495016 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
CDK11A-221ENST00000495016 KIAA0586Q9BVV6 1533 aa20.03■□□□□ 0.8
CDK11A-221ENST00000495016 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.8
CDK11A-221ENST00000495016 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
CDK11A-221ENST00000495016 CUL7Q14999 1698 aa19.92■□□□□ 0.78
CDK11A-221ENST00000495016 PTPRGP23470 1445 aa19.89■□□□□ 0.77
CDK11A-221ENST00000495016 FAM69CQ0P6D2 419 aa19.89■□□□□ 0.77
CDK11A-221ENST00000495016 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
CDK11A-221ENST00000495016 TTBK1Q5TCY1 1321 aaPredicted RBP19.87■□□□□ 0.77
CDK11A-221ENST00000495016 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
CDK11A-221ENST00000495016 RAPGEF2Q9Y4G8 1499 aa19.83■□□□□ 0.76
CDK11A-221ENST00000495016 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
CDK11A-221ENST00000495016 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
CDK11A-221ENST00000495016 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
CDK11A-221ENST00000495016 IQGAP2Q13576 1575 aa19.74■□□□□ 0.75
CDK11A-221ENST00000495016 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
CDK11A-221ENST00000495016 DISP1Q96F81 1524 aa19.71■□□□□ 0.75
CDK11A-221ENST00000495016 UACAQ9BZF9 1416 aa19.7■□□□□ 0.74
CDK11A-221ENST00000495016 ABCC2Q92887 1545 aa19.68■□□□□ 0.74
CDK11A-221ENST00000495016 UHRF1BP1LA0JNW5 1464 aa19.67■□□□□ 0.74
CDK11A-221ENST00000495016 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
CDK11A-221ENST00000495016 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
CDK11A-221ENST00000495016 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
CDK11A-221ENST00000495016 PLB1Q6P1J6 1458 aa19.63■□□□□ 0.73
CDK11A-221ENST00000495016 ASXL2Q76L83 1435 aa19.63■□□□□ 0.73
CDK11A-221ENST00000495016 DIP2BQ9P265 1576 aa19.61■□□□□ 0.73
CDK11A-221ENST00000495016 KIF13AQ9H1H9 1805 aa19.6■□□□□ 0.73
CDK11A-221ENST00000495016 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
CDK11A-221ENST00000495016 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
CDK11A-221ENST00000495016 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
CDK11A-221ENST00000495016 KIAA0556O60303 1618 aa19.54■□□□□ 0.72
CDK11A-221ENST00000495016 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
CDK11A-221ENST00000495016 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
CDK11A-221ENST00000495016 EEA1Q15075 1411 aa19.48■□□□□ 0.71
CDK11A-221ENST00000495016 GLI2P10070 1586 aa19.48■□□□□ 0.71
CDK11A-221ENST00000495016 KCNH8Q96L42 1107 aa19.47■□□□□ 0.71
CDK11A-221ENST00000495016 WDR7Q9Y4E6 1490 aa19.43■□□□□ 0.7
CDK11A-221ENST00000495016 KDM6BO15054 1643 aa19.43■□□□□ 0.7
CDK11A-221ENST00000495016 ARID3CA6NKF2 412 aa19.41■□□□□ 0.7
CDK11A-221ENST00000495016 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
CDK11A-221ENST00000495016 KDM4FA0A1W2PPD8 638 aa19.39■□□□□ 0.69
CDK11A-221ENST00000495016 ABCA8O94911 1581 aa19.39■□□□□ 0.69
CDK11A-221ENST00000495016 CTTNBP2Q8WZ74 1663 aa19.39■□□□□ 0.69
CDK11A-221ENST00000495016 TSPOAP1O95153 1857 aa19.38■□□□□ 0.69
CDK11A-221ENST00000495016 ZCCHC11Q5TAX3 1644 aaKnown RBP19.38■□□□□ 0.69
CDK11A-221ENST00000495016 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
CDK11A-221ENST00000495016 CD109Q6YHK3 1445 aa19.36■□□□□ 0.69
CDK11A-221ENST00000495016 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
CDK11A-221ENST00000495016 COL17A1Q9UMD9 1497 aaPredicted RBP19.35■□□□□ 0.69
CDK11A-221ENST00000495016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
CDK11A-221ENST00000495016 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
CDK11A-221ENST00000495016 ATP10BO94823 1461 aa19.34■□□□□ 0.69
CDK11A-221ENST00000495016 MAP3K4Q9Y6R4 1608 aa19.29■□□□□ 0.68
CDK11A-221ENST00000495016 MAGI3Q5TCQ9 1506 aa19.29■□□□□ 0.68
CDK11A-221ENST00000495016 PPRC1Q5VV67 1664 aaKnown RBP19.28■□□□□ 0.68
CDK11A-221ENST00000495016 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
CDK11A-221ENST00000495016 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
CDK11A-221ENST00000495016 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
CDK11A-221ENST00000495016 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
CDK11A-221ENST00000495016 SAMD9Q5K651 1589 aa19.24■□□□□ 0.67
CDK11A-221ENST00000495016 PHLDB1Q86UU1 1377 aa19.2■□□□□ 0.66
CDK11A-221ENST00000495016 NUP153P49790 1475 aaKnown RBP19.19■□□□□ 0.66
CDK11A-221ENST00000495016 KIF21BO75037 1637 aa19.17■□□□□ 0.66
CDK11A-221ENST00000495016 RAPGEF6Q8TEU7 1601 aa19.16■□□□□ 0.66
CDK11A-221ENST00000495016 CFAP43Q8NDM7 1665 aa19.15■□□□□ 0.66
CDK11A-221ENST00000495016 ADGRL1O94910 1474 aa19.14■□□□□ 0.65
CDK11A-221ENST00000495016 RAPGEF3O95398 923 aa19.13■□□□□ 0.65
CDK11A-221ENST00000495016 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
CDK11A-221ENST00000495016 EFCAB5A4FU69 1503 aa19.13■□□□□ 0.65
CDK11A-221ENST00000495016 ARAP3Q8WWN8 1544 aa19.13■□□□□ 0.65
CDK11A-221ENST00000495016 NEO1Q92859 1461 aa19.08■□□□□ 0.64
CDK11A-221ENST00000495016 ABCA9Q8IUA7 1624 aa19.07■□□□□ 0.64
CDK11A-221ENST00000495016 CDK11AQ9UQ88 783 aaPredicted RBP19.07■□□□□ 0.64
CDK11A-221ENST00000495016 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
CDK11A-221ENST00000495016 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
CDK11A-221ENST00000495016 AKNAQ7Z591 1439 aa19■□□□□ 0.63
CDK11A-221ENST00000495016 ARID4BQ4LE39 1312 aaPredicted RBP18.98■□□□□ 0.63
CDK11A-221ENST00000495016 FANCAO15360 1455 aa18.97■□□□□ 0.63
CDK11A-221ENST00000495016 DENND4BO75064 1496 aaPredicted RBP18.97■□□□□ 0.63
CDK11A-221ENST00000495016 CDK13Q14004 1512 aaKnown RBP18.97■□□□□ 0.63
CDK11A-221ENST00000495016 EFCAB2Q5VUJ9 269 aa18.96■□□□□ 0.63
CDK11A-221ENST00000495016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDK11A-221ENST00000495016 PLCH2O75038 1416 aa18.95■□□□□ 0.62
CDK11A-221ENST00000495016 SCAPERQ9BY12 1400 aa18.9■□□□□ 0.62
CDK11A-221ENST00000495016 TROQ12816 1431 aaPredicted RBP18.89■□□□□ 0.61
CDK11A-221ENST00000495016 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
CDK11A-221ENST00000495016 CLIP1P30622 1438 aa18.87■□□□□ 0.61
CDK11A-221ENST00000495016 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
CDK11A-221ENST00000495016 CASKIN1Q8WXD9 1431 aa18.85■□□□□ 0.61
CDK11A-221ENST00000495016 FRMPD1Q5SYB0 1578 aa18.85■□□□□ 0.61
CDK11A-221ENST00000495016 MAGI2Q86UL8 1455 aa18.84■□□□□ 0.61
CDK11A-221ENST00000495016 PTPRMP28827 1452 aa18.83■□□□□ 0.6
CDK11A-221ENST00000495016 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
CDK11A-221ENST00000495016 AFAP1Q8N556 730 aa18.81■□□□□ 0.6
CDK11A-221ENST00000495016 POGZQ7Z3K3 1410 aa18.81■□□□□ 0.6
CDK11A-221ENST00000495016 YEATS2Q9ULM3 1422 aa18.81■□□□□ 0.6
CDK11A-221ENST00000495016 HECW2Q9P2P5 1572 aa18.78■□□□□ 0.6
CDK11A-221ENST00000495016 MLECQ14165 292 aa18.78■□□□□ 0.6
CDK11A-221ENST00000495016 MYT1LQ9UL68 1186 aa18.78■□□□□ 0.6
CDK11A-221ENST00000495016 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms