RNA–Protein interactions for RNA: ENST00000495016.5

CDK11A-221, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 286 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-221ENST00000495016 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
CDK11A-221ENST00000495016 ABCC9O60706 1549 aa25.63■■□□□ 1.69
CDK11A-221ENST00000495016 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
CDK11A-221ENST00000495016 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
CDK11A-221ENST00000495016 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
CDK11A-221ENST00000495016 NACADO15069 1562 aa24.26■■□□□ 1.47
CDK11A-221ENST00000495016 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
CDK11A-221ENST00000495016 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDK11A-221ENST00000495016 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
CDK11A-221ENST00000495016 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
CDK11A-221ENST00000495016 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
CDK11A-221ENST00000495016 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
CDK11A-221ENST00000495016 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
CDK11A-221ENST00000495016 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
CDK11A-221ENST00000495016 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
CDK11A-221ENST00000495016 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
CDK11A-221ENST00000495016 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
CDK11A-221ENST00000495016 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
CDK11A-221ENST00000495016 NCAPD3P42695 1498 aa22.49■■□□□ 1.19
CDK11A-221ENST00000495016 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
CDK11A-221ENST00000495016 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
CDK11A-221ENST00000495016 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
CDK11A-221ENST00000495016 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
CDK11A-221ENST00000495016 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
CDK11A-221ENST00000495016 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
CDK11A-221ENST00000495016 ERCC6Q03468 1493 aa22.14■■□□□ 1.13
CDK11A-221ENST00000495016 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
CDK11A-221ENST00000495016 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
CDK11A-221ENST00000495016 CUX2O14529 1486 aa22.03■■□□□ 1.12
CDK11A-221ENST00000495016 NESP48681 1621 aa22.02■■□□□ 1.12
CDK11A-221ENST00000495016 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
CDK11A-221ENST00000495016 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
CDK11A-221ENST00000495016 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
CDK11A-221ENST00000495016 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
CDK11A-221ENST00000495016 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
CDK11A-221ENST00000495016 WIZO95785 1651 aa21.76■■□□□ 1.07
CDK11A-221ENST00000495016 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
CDK11A-221ENST00000495016 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.04
CDK11A-221ENST00000495016 CFTRP13569 1480 aa21.57■■□□□ 1.04
CDK11A-221ENST00000495016 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
CDK11A-221ENST00000495016 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
CDK11A-221ENST00000495016 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
CDK11A-221ENST00000495016 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.03
CDK11A-221ENST00000495016 WDR62O43379 1518 aa21.46■■□□□ 1.03
CDK11A-221ENST00000495016 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
CDK11A-221ENST00000495016 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
CDK11A-221ENST00000495016 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
CDK11A-221ENST00000495016 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
CDK11A-221ENST00000495016 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
CDK11A-221ENST00000495016 TOPBP1Q92547 1522 aa21.1■□□□□ 0.97
CDK11A-221ENST00000495016 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
CDK11A-221ENST00000495016 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
CDK11A-221ENST00000495016 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
CDK11A-221ENST00000495016 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
CDK11A-221ENST00000495016 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
CDK11A-221ENST00000495016 AQRO60306 1485 aaKnown RBP eCLIP20.93■□□□□ 0.941e-8■■□□□ 13.7
CDK11A-221ENST00000495016 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
CDK11A-221ENST00000495016 SOGA1O94964 1423 aa20.9■□□□□ 0.94
CDK11A-221ENST00000495016 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
CDK11A-221ENST00000495016 FBLN2P98095 1184 aa20.86■□□□□ 0.93
CDK11A-221ENST00000495016 RAD54L2Q9Y4B4 1467 aa20.86■□□□□ 0.93
CDK11A-221ENST00000495016 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
CDK11A-221ENST00000495016 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
CDK11A-221ENST00000495016 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
CDK11A-221ENST00000495016 CUX1P39880 1505 aa20.77■□□□□ 0.92
CDK11A-221ENST00000495016 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
CDK11A-221ENST00000495016 CYB5RLQ6IPT4 315 aa20.69■□□□□ 0.9
CDK11A-221ENST00000495016 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
CDK11A-221ENST00000495016 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
CDK11A-221ENST00000495016 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
CDK11A-221ENST00000495016 RIMBP3CA6NJZ7 1639 aa20.64■□□□□ 0.9
CDK11A-221ENST00000495016 RIMBP3BA6NNM3 1639 aa20.64■□□□□ 0.9
CDK11A-221ENST00000495016 RIMBP3Q9UFD9 1639 aa20.64■□□□□ 0.9
CDK11A-221ENST00000495016 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
CDK11A-221ENST00000495016 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
CDK11A-221ENST00000495016 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
CDK11A-221ENST00000495016 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
CDK11A-221ENST00000495016 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
CDK11A-221ENST00000495016 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
CDK11A-221ENST00000495016 CHD1O14646 1710 aa20.54■□□□□ 0.88
CDK11A-221ENST00000495016 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
CDK11A-221ENST00000495016 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
CDK11A-221ENST00000495016 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
CDK11A-221ENST00000495016 TRHP20396 242 aaPredicted RBP20.43■□□□□ 0.86
CDK11A-221ENST00000495016 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
CDK11A-221ENST00000495016 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
CDK11A-221ENST00000495016 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
CDK11A-221ENST00000495016 GRIN2AQ12879 1464 aa20.36■□□□□ 0.85
CDK11A-221ENST00000495016 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
CDK11A-221ENST00000495016 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
CDK11A-221ENST00000495016 NUP160Q12769 1436 aa20.3■□□□□ 0.84
CDK11A-221ENST00000495016 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
CDK11A-221ENST00000495016 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
CDK11A-221ENST00000495016 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
CDK11A-221ENST00000495016 IGF1RP08069 1367 aa20.21■□□□□ 0.83
CDK11A-221ENST00000495016 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
CDK11A-221ENST00000495016 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
CDK11A-221ENST00000495016 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
CDK11A-221ENST00000495016 ERCC6L2Q5T890 1561 aa20.13■□□□□ 0.81
CDK11A-221ENST00000495016 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms